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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:2808792..2809711- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_104570-T1 ID=ATCC64974_104570-T1|Name=ATCC64974_104570-T1|organism=Aspergillus niger N402|type=mRNA|length=920bp|location=Sequence derived from alignment at OGUI01000017.1:2808792..2809711- (Aspergillus niger N402)
ATGGCGGCTGCAATGCGACTTGCCGCTAAGTTCAACTCTTACTATGCCGA
GAAACCAAGTAAGGCTCTCACGCTCCCTTGCTAAGCGCCTTCAGGAGCTG
ACTGACTTTGTGTCGTCTTTAGTCTTAACCACCATGGTTACCAATGCGGT
AAGAGTCCCTTCGAGCGAATCATCTGTCATTGGCATATGATCGACTGACG
TTGGACGGCGCGGTAGATACTTGGTGGGATCGCAGATACGGTCGCACAGT
TAATCACGGCTTTCAAGGCTCGTGGAGGACGCAGGCCCTCTGACAGTAAC
GATCTTATTTCAATTGAGATCCATGACCTCGATAAAGAGAAGCCGCCTGC
TCTTGGAGAGCTGGGACATGCTAGACATATGCCGCCGCCCTTCGACTTCG
AGCGCCTGACTCGCTTTATGTCGTACGGTTTCTTCATGGCCCCGGTTCAG
TTCCATTGGTTCGGTTTCTTGTCCAGGGCGTTCCCCCTTACCAAGAGGAA
CCCGTCGATTCCCGCGCTGAAGAGAGTGTGCGTGGATCAGCTGATGTTCG
CTCCTTTTGGTATGAACTGTCTCCGAAGGAAGAAGAAAGCTCTTTTCTCT
TAGCTAATATTATTACCAGGTCTGGCGTGCTTCTTCTCCTTCATGACGGT
TGCAGAGGGAGGAGGAAGGAGAGCCTTGACGCGCAAGTTCCAGGACGTCT
ATCTGCCAACCCTCAAGGCCAACTTTGTCCTTTGGCCCGCTGTTCAGATT
CTGAACTTCCGTGTCGTACCTATCCAGTTCCAGATTGTGAGTACTATTGT
GATAAAACTCTTGTGCACTGTTATACTGATATTTCTTTTTTCTTCCAGCC
CTTCGTGTCTTCCGTCGGAATCGCCTGGACTGCGTATCTGTCGCTGACCA
ACTCTTCGGAGGAGGAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:2808792..2809711- >ATCC64974_104570-T1 ID=ATCC64974_104570-T1|Name=ATCC64974_104570-T1|organism=Aspergillus niger N402|type=CDS|length=3330bp|location=Sequence derived from alignment at OGUI01000017.1:2808792..2809711- (Aspergillus niger N402)
CCCTTCGTGTCTTCCGTCGGAATCGCCTGGACTGCGTATCTGTCGCTGAC
CAACTCTTCGGAGGAGGAGTAAGTCTGGCGTGCTTCTTCTCCTTCATGAC
GGTTGCAGAGGGAGGAGGAAGGAGAGCCTTGACGCGCAAGTTCCAGGACG
TCTATCTGCCAACCCTCAAGGCCAACTTTGTCCTTTGGCCCGCTGTTCAG
ATTCTGAACTTCCGTGTCGTACCTATCCAGTTCCAGATTATACTTGGTGG
GATCGCAGATACGGTCGCACAGTTAATCACGGCTTTCAAGGCTCGTGGAG
GACGCAGGCCCTCTGACAGTAACGATCTTATTTCAATTGAGATCCATGAC
CTCGATAAAGAGAAGCCGCCTGCTCTTGGAGAGCTGGGACATGCTAGACA
TATGCCGCCGCCCTTCGACTTCGAGCGCCTGACTCGCTTTATGTCGTACG
GTTTCTTCATGGCCCCGGTTCAGTTCCATTGGTTCGGTTTCTTGTCCAGG
GCGTTCCCCCTTACCAAGAGGAACCCGTCGATTCCCGCGCTGAAGAGAGT
GTGCGTGGATCAGCTGATGTTCGCTCCTTTTGTCTTAACCACCATGGTTA
CCAATGCGATGGCGGCTGCAATGCGACTTGCCGCTAAGTTCAACTCTTAC
TATGCCGAGAAACCAACCCTTCGTGTCTTCCGTCGGAATCGCCTGGACTG
CGTATCTGTCGCTGACCAACTCTTCGGAGGAGGAGTAAGTCTGGCGTGCT
TCTTCTCCTTCATGACGGTTGCAGAGGGAGGAGGAAGGAGAGCCTTGACG
CGCAAGTTCCAGGACGTCTATCTGCCAACCCTCAAGGCCAACTTTGTCCT
TTGGCCCGCTGTTCAGATTCTGAACTTCCGTGTCGTACCTATCCAGTTCC
AGATTATACTTGGTGGGATCGCAGATACGGTCGCACAGTTAATCACGGCT
TTCAAGGCTCGTGGAGGACGCAGGCCCTCTGACAGTAACGATCTTATTTC
AATTGAGATCCATGACCTCGATAAAGAGAAGCCGCCTGCTCTTGGAGAGC
TGGGACATGCTAGACATATGCCGCCGCCCTTCGACTTCGAGCGCCTGACT
CGCTTTATGTCGTACGGTTTCTTCATGGCCCCGGTTCAGTTCCATTGGTT
CGGTTTCTTGTCCAGGGCGTTCCCCCTTACCAAGAGGAACCCGTCGATTC
CCGCGCTGAAGAGAGTGTGCGTGGATCAGCTGATGTTCGCTCCTTTTGTC
TTAACCACCATGGTTACCAATGCGATGGCGGCTGCAATGCGACTTGCCGC
TAAGTTCAACTCTTACTATGCCGAGAAACCAACCCTTCGTGTCTTCCGTC
GGAATCGCCTGGACTGCGTATCTGTCGCTGACCAACTCTTCGGAGGAGGA
GTAAGTCTGGCGTGCTTCTTCTCCTTCATGACGGTTGCAGAGGGAGGAGG
AAGGAGAGCCTTGACGCGCAAGTTCCAGGACGTCTATCTGCCAACCCTCA
AGGCCAACTTTGTCCTTTGGCCCGCTGTTCAGATTCTGAACTTCCGTGTC
GTACCTATCCAGTTCCAGATTATACTTGGTGGGATCGCAGATACGGTCGC
ACAGTTAATCACGGCTTTCAAGGCTCGTGGAGGACGCAGGCCCTCTGACA
GTAACGATCTTATTTCAATTGAGATCCATGACCTCGATAAAGAGAAGCCG
CCTGCTCTTGGAGAGCTGGGACATGCTAGACATATGCCGCCGCCCTTCGA
CTTCGAGCGCCTGACTCGCTTTATGTCGTACGGTTTCTTCATGGCCCCGG
TTCAGTTCCATTGGTTCGGTTTCTTGTCCAGGGCGTTCCCCCTTACCAAG
AGGAACCCGTCGATTCCCGCGCTGAAGAGAGTGTGCGTGGATCAGCTGAT
GTTCGCTCCTTTTGTCTTAACCACCATGGTTACCAATGCGATGGCGGCTG
CAATGCGACTTGCCGCTAAGTTCAACTCTTACTATGCCGAGAAACCAACC
CTTCGTGTCTTCCGTCGGAATCGCCTGGACTGCGTATCTGTCGCTGACCA
ACTCTTCGGAGGAGGAGTAAGTCTGGCGTGCTTCTTCTCCTTCATGACGG
TTGCAGAGGGAGGAGGAAGGAGAGCCTTGACGCGCAAGTTCCAGGACGTC
TATCTGCCAACCCTCAAGGCCAACTTTGTCCTTTGGCCCGCTGTTCAGAT
TCTGAACTTCCGTGTCGTACCTATCCAGTTCCAGATTATACTTGGTGGGA
TCGCAGATACGGTCGCACAGTTAATCACGGCTTTCAAGGCTCGTGGAGGA
CGCAGGCCCTCTGACAGTAACGATCTTATTTCAATTGAGATCCATGACCT
CGATAAAGAGAAGCCGCCTGCTCTTGGAGAGCTGGGACATGCTAGACATA
TGCCGCCGCCCTTCGACTTCGAGCGCCTGACTCGCTTTATGTCGTACGGT
TTCTTCATGGCCCCGGTTCAGTTCCATTGGTTCGGTTTCTTGTCCAGGGC
GTTCCCCCTTACCAAGAGGAACCCGTCGATTCCCGCGCTGAAGAGAGTGT
GCGTGGATCAGCTGATGTTCGCTCCTTTTGTCTTAACCACCATGGTTACC
AATGCGATGGCGGCTGCAATGCGACTTGCCGCTAAGTTCAACTCTTACTA
TGCCGAGAAACCAACCCTTCGTGTCTTCCGTCGGAATCGCCTGGACTGCG
TATCTGTCGCTGACCAACTCTTCGGAGGAGGAGTAAGTCTGGCGTGCTTC
TTCTCCTTCATGACGGTTGCAGAGGGAGGAGGAAGGAGAGCCTTGACGCG
CAAGTTCCAGGACGTCTATCTGCCAACCCTCAAGGCCAACTTTGTCCTTT
GGCCCGCTGTTCAGATTCTGAACTTCCGTGTCGTACCTATCCAGTTCCAG
ATTATACTTGGTGGGATCGCAGATACGGTCGCACAGTTAATCACGGCTTT
CAAGGCTCGTGGAGGACGCAGGCCCTCTGACAGTAACGATCTTATTTCAA
TTGAGATCCATGACCTCGATAAAGAGAAGCCGCCTGCTCTTGGAGAGCTG
GGACATGCTAGACATATGCCGCCGCCCTTCGACTTCGAGCGCCTGACTCG
CTTTATGTCGTACGGTTTCTTCATGGCCCCGGTTCAGTTCCATTGGTTCG
GTTTCTTGTCCAGGGCGTTCCCCCTTACCAAGAGGAACCCGTCGATTCCC
GCGCTGAAGAGAGTGTGCGTGGATCAGCTGATGTTCGCTCCTTTTGTCTT
AACCACCATGGTTACCAATGCGATGGCGGCTGCAATGCGACTTGCCGCTA
AGTTCAACTCTTACTATGCCGAGAAACCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_104570-T1 | ATCC64974_104570-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.10 |
| DBxref | InterPro:IPR007248 |
| DBxref | PFAM:PF04117 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:2808792..2809711 - |
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