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ATCC64974_104620-T1, ATCC64974_104620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104620-T1
Unique NameATCC64974_104620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2826354..2827585-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104620-T1 ID=ATCC64974_104620-T1|Name=ATCC64974_104620-T1|organism=Aspergillus niger N402|type=mRNA|length=1232bp|location=Sequence derived from alignment at OGUI01000017.1:2826354..2827585- (Aspergillus niger N402)
ATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACAT
GTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACA
TGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAAT
ACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTC
CACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACA
CCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGC
AACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCT
AGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGA
GCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGC
CAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATAC
GCGAGAAAAGCCCTTCTATTGCGCTCTACCAGGTAAGTTTCCCCAGACCT
TCCCCGTTATAAGTTCCTTTCTTGTTATCCCTTGGCAGCGTCTAACATTG
TTCCTTGATATTTGCCTATAGAATGCGACCGCAGCTTCACTCGATCAGAT
GCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAGGCGCTTCGTCC
CTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTCGGCGGCAGGAA
CGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGAAGCTGAAGCTA
TCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAAAGTGCCAATGA
GGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCCTGGTGGGTTGG
AGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCCCGCAACTGTAT
CGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGATGGCGCGGAGCT
ACGCGACGCATGGGAAAAGATTCGCGTCAAGAGAAAGGAATCTTGGATGG
AGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGGTACGATTGTTC
AAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCGCCGGCAAATGG
GACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGTAGATGTTGCAC
AAGACCAGGGGTCTGGATCTGTTCCTCCATGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2826354..2827585-

>ATCC64974_104620-T1 ID=ATCC64974_104620-T1|Name=ATCC64974_104620-T1|organism=Aspergillus niger N402|type=CDS|length=2286bp|location=Sequence derived from alignment at OGUI01000017.1:2826354..2827585- (Aspergillus niger N402)
AATGCGACCGCAGCTTCACTCGATCAGATGCCCTTGCCAAACACATGAGA
ACTGTCCATGAAACAGAGGCGCTTCGTCCCTCCGACCCCGTACCCAAACA
CCACAATGTCGCTGCTTCGGCGGCAGGAACGCCGACCGCGACTCCGTCTG
GCAAGATCCAACGATTGAAGCTGAAGCTATCGTTTCCACCGAAGGACGAT
GCAGGAGATCATAGCGAAAGTGCCAATGAGGAGGGCGCAGGACTGGAGGA
CGATCTTCACGTACCTCCTGGTGGGTTGGAGAAGGAATTCGACACCTACG
AGATGCTGCTCGAAGGCCCGCAACTGTATCGGTTGCTTCTGAGACAGATC
CATTGGGCACAGCAGGATGGCGCGGAGCTACGCGACGCATGGGAAAAGAT
TCGCGTCAAGAGAAAGGAATCTTGGATGGAGAAGGAGGCGATCTTCGATG
ATCTGATGGAGGCCGAGGTACGATTGTTCAAGCTCCTTGATGAGAAATTC
AGCGTGTCCAAGTCTGCGCCGGCAAATGGGACGGATAATCCGCCGCAGTC
GGAGCAGCCAATGGAGGTAGATGTTGCACAAGACCAGGGGTCTGGATCTG
TTCCTCCATGAATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCT
TCCGACGACATGTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTC
GGGCTCCAACATGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTT
GGGATCGCAATACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCT
CCTTCTCCCTCCACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAA
TTCTCCTAACACCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACA
GCGGCCAAGGCAACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGAC
GCCGGTGACCTAGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGA
ACATGTCGGGAGCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCA
GTCGGAAGGGCCAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATG
AGAAGCCATACGCGAGAAAAGCCCTTCTATTGCGCTCTACCAGAATGCGA
CCGCAGCTTCACTCGATCAGATGCCCTTGCCAAACACATGAGAACTGTCC
ATGAAACAGAGGCGCTTCGTCCCTCCGACCCCGTACCCAAACACCACAAT
GTCGCTGCTTCGGCGGCAGGAACGCCGACCGCGACTCCGTCTGGCAAGAT
CCAACGATTGAAGCTGAAGCTATCGTTTCCACCGAAGGACGATGCAGGAG
ATCATAGCGAAAGTGCCAATGAGGAGGGCGCAGGACTGGAGGACGATCTT
CACGTACCTCCTGGTGGGTTGGAGAAGGAATTCGACACCTACGAGATGCT
GCTCGAAGGCCCGCAACTGTATCGGTTGCTTCTGAGACAGATCCATTGGG
CACAGCAGGATGGCGCGGAGCTACGCGACGCATGGGAAAAGATTCGCGTC
AAGAGAAAGGAATCTTGGATGGAGAAGGAGGCGATCTTCGATGATCTGAT
GGAGGCCGAGGTACGATTGTTCAAGCTCCTTGATGAGAAATTCAGCGTGT
CCAAGTCTGCGCCGGCAAATGGGACGGATAATCCGCCGCAGTCGGAGCAG
CCAATGGAGGTAGATGTTGCACAAGACCAGGGGTCTGGATCTGTTCCTCC
ATGAATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACG
ACATGTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCC
AACATGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCG
CAATACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTC
CCTCCACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCT
AACACCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCA
AGGCAACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTG
ACCTAGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTC
GGGAGCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAA
GGGCCAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCC
ATACGCGAGAAAAGCCCTTCTATTGCGCTCTACCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_104620ATCC64974_104620Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104620-T1ATCC64974_104620-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104620-T1.cdsATCC64974_104620-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104620-T1.exon2ATCC64974_104620-T1.exon2Aspergillus niger N402exon
ATCC64974_104620-T1.exon1ATCC64974_104620-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF13912
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2826354..2827585 -
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