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ATCC64974_104720-T1, ATCC64974_104720-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104720-T1
Unique NameATCC64974_104720-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2867663..2869751-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104720-T1 ID=ATCC64974_104720-T1|Name=ATCC64974_104720-T1|organism=Aspergillus niger N402|type=mRNA|length=2089bp|location=Sequence derived from alignment at OGUI01000017.1:2867663..2869751- (Aspergillus niger N402)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
AGTCCAGATCTCGGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAACTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAGCTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCACGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTCGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATCTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACACTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGTCCCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCC
GATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTC
ACAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGGTAAGCTGTACTCGA
CATTCCTTTTCTAACATATCCCTGACTAACCATGACACAGCGCGTGGAAT
TGCTCAATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGAC
ATCGACAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAA
GTTGGACGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAG
ACGACCAGTCGGCGGCGAATCTGTCGAAGCTGCTGCAAAGAGCTCACCAA
TGGAAGCAGCAACAGCAACAACAGGGGGATGGAGCATAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:2867663..2869751-

>ATCC64974_104720-T1 ID=ATCC64974_104720-T1|Name=ATCC64974_104720-T1|organism=Aspergillus niger N402|type=CDS|length=4068bp|location=Sequence derived from alignment at OGUI01000017.1:2867663..2869751- (Aspergillus niger N402)
CGCGTGGAATTGCTCAATGCTTGGCGGTCATTCGAGCACACGCACGGTTC
ACCAGAAGACATCGACAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGA
AGCGGCGCAAGTTGGACGACGATCGGTACGAGGAGTACATGGATTACGTA
TTCCCAGCAGACGACCAGTCGGCGGCGAATCTGTCGAAGCTGCTGCAAAG
AGCTCACCAATGGAAGCAGCAACAGCAACAACAGGGGGATGGAGCATAGA
TGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCCA
GTCCAGATCTCGGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGGA
GCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAACTGC
ACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCGG
AACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGGA
GCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGACG
TCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGATG
CGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGAC
GATCTTGCCTCGGGTGGATAAGCTGTGGTACAAGTATGTCTACATGGAGG
AGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGATG
TCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAAA
GCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACCA
TTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGAG
GAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTGA
GACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCCA
AGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAAG
TATGCCTTAGACCGACTTCCTCGCTCAAAGTCCACGGCCCTTCACAAGTC
CTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGATG
TTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAAC
TCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTCGAGGAAACCTC
GGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAGA
TACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTGG
GTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTGC
GCGCCAAATCTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTCA
CCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGATG
AATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCCC
GAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTCG
AGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCCT
TCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGGA
CGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCGA
CACTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGAG
TACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGGA
GAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATCA
ACGTCCCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCCG
ATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCA
CAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTCA
ATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGACATCGAC
AAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGGA
CGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAGACGACC
AGTCGGCGGCGAATCTGTCGAAGCTGCTGCAAAGAGCTCACCAATGGAAG
CAGCAACAGCAACAACAGGGGGATGGAGCATAGATGGAGTCGTCACGCGG
CCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCCAGTCCAGATCTCGGCGG
AGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGGAGCCCGCATTGCAGGCG
CCGACGCAGCGCTTTGCCGACCTGGAAGAACTGCACGAATACCAGGGCCG
CAAGCGAAAAGAGTTCGAAGACTATGTGCGTCGGAACCGAATTAACATGA
ACAACTGGATGCGCTATGCGGCATGGGAGCTGGAGCAAAAGGAGTTCCGC
CGGGCGCGTTCAATCTTTGAACGGGCGCTGGACGTCAGCCCGACCTCGGT
GGTTCTGTGGATTCGGTACATCGAGTCGGAGATGCGGAATCGCAACATCA
ATCATGCCAGGAACTTGCTCGACCGTGCGGTGACGATCTTGCCTCGGGTG
GATAAGCTGTGGTACAAGTATGTCTACATGGAGGAGACACTGGGCAACAT
TGCGGGTACACGACAGGTCTTTGAGCGGTGGATGTCTTGGGAGCCGGAAG
AGGGAGCTTGGAGCGCCTATATCAAGCTGGAAAAGCGGTACAATGAGTTC
GAGAGGGCGCGCGCGATCTTCCAGCGGTTCACCATTGTTCACCCTGAACC
ACGCAATTGGATCAAGTGGGCTCGGTTTGAAGAGGAGTATGGAACGAGCG
ATCTCGTGCGGGAGGTGTATGGAATGGCGATTGAGACTCTGGGAGAGGAT
TTCATGGACGAGAAGCTCTTCATCGGCTATGCCAAGTTCGAGGCGAAGTT
GAAGGAGTACGAACGTGCCCGGGCGATTTACAAGTATGCCTTAGACCGAC
TTCCTCGCTCAAAGTCCACGGCCCTTCACAAGTCCTATACAACATTCGAG
AAACAATATGGTGACCGGGAAGGCGTTGAGGATGTTATTCTCTCAAAACG
CAGAGTCCAGTACGAGGAGCAACTGAAAGAGAACTCGCGGAACTACGACA
TATGGTTCGACTTTGCCCGGCTCGAGGAAACCTCGGGTGACCCCGACCGA
GTACGCGACATCTACGAACGCGCAATCGCTCAGATACCACCATCGCAGGA
GAAGCGGCACTGGAGACGGTATATCTACCTGTGGGTATTCTACGCCATTT
GGGAGGAAATGGAAGCCAAGGACGCCGAGCGTGCGCGCCAAATCTACAAC
GAGTGTCTCAAGTTGATTCCCCACAAAAAGTTCACCTTTGCCAAGATCTG
GCTCCTGAAGGCGCAGTTTGAGATCCGTCAGATGAATCTCCAAGCCGCTC
GTAAGACGCTTGGCCAGGCCATCGGCATGTGCCCGAAGGATAAACTCTTC
CGGGGATACATTGATCTAGAGCGCCAGCTGTTCGAGTTCGTGCGGTGCCG
GACACTGTTCGAAAAGCAGATCGAGTGGAATCCTTCCAACAGCCAGTCAT
GGATCAAGTATGCCGAATTGGAGCGCGGGCTGGACGACACCGACCGTGCA
CGAGCCATCTACGAGCTTGGAATTGACCAGCCGACACTCGATATGCCCGA
GTTGGTGTGGAAGTCGTACATTGACTTTGAGGAGTACGAAGGCGAATACG
ACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGGAGAAGACAGATCACGTC
AAGGTGTGGATTAACTACGCCCGCTTCGAGATCAACGTCCCCGACGAGGA
AGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCCGATCAGCGAGGATGCCA
AGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCACAAGGTGTTCAAGGAG
AAGGAGCTCAAGGAAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CLF1ATCC64974_104720Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104720-T1ATCC64974_104720-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104720-T1.cdsATCC64974_104720-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104720-T1.exon2ATCC64974_104720-T1.exon2Aspergillus niger N402exon
ATCC64974_104720-T1.exon1ATCC64974_104720-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR003107
DBxrefPFAM:PF02184
ProductNineTeen Complex (NTC) component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2867663..2869751 -
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