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ATCC64974_104900-T1, ATCC64974_104900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104900-T1
Unique NameATCC64974_104900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2915299..2916597-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104900-T1 ID=ATCC64974_104900-T1|Name=ATCC64974_104900-T1|organism=Aspergillus niger N402|type=mRNA|length=1299bp|location=Sequence derived from alignment at OGUI01000017.1:2915299..2916597- (Aspergillus niger N402)
ATGGCGGAGTAAGTCTTCCTGGCCCTATCAGTCTCATCTAGGGGTCTGCA
TGCTAATGCTCGCTATAGGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCG
AGGCCTTGGTATGCACACCATGAAAATCTCCCCCCCACCCGCCTTTTTCA
CGGCCGGCGACGATACTTACAGCGTGGCATATAGGTGGTGATGAAGATCA
TCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTC
GGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCC
CGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACC
CGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAG
ATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTG
GTACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGA
ACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTG
CACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCG
CCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCG
AGGAGTACGTTCATAATACTATTGCCCCGGAGGGATGATAGACGCATGCT
AATTGGTTGTTTTTGGCAGGCTCCAAAAGTCCAACCTCAGGTACCAGGAC
ATCCTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTC
CTTCATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCC
CCCCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTG
CTGGCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGA
GAAGAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGA
CCAACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAG
ATCACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGC
TCTCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGC
TGCCCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTT
GAGCAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAA
GATGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:2915299..2916597-

>ATCC64974_104900-T1 ID=ATCC64974_104900-T1|Name=ATCC64974_104900-T1|organism=Aspergillus niger N402|type=CDS|length=4392bp|location=Sequence derived from alignment at OGUI01000017.1:2915299..2916597- (Aspergillus niger N402)
GCTCCAAAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGAGCTCCCCG
TTGAAATCCACAACTCTCACCTGATCACCTCCTTCATTCACCAGCTCCAG
ACTCCCACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTGGCCGCGTT
GGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAACTTCGACA
ACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCGACCTTCTG
CTTGACAGCATCGAGGTGCACCACACCGAGACCAACAACTTCCAGTACTA
CCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTGGCAGAACA
AGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGCTC
CCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGCCG
CCTGGACAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGCTCGCCAGG
TCGACAGCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCGTCAAGGGC
AACCTGCTTCCGGGTGAGACGGCCAAATAGGTGGTGATGAAGATCATCAA
GCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCGGTA
TGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCCGTC
GTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACCCGGC
TGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAGATGG
TCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGTAC
ACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAACCA
GTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCACG
ACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCCTG
TCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAGGA
GAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGATGGCGGAGC
TCCAAAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGAGCTCCCCGTT
GAAATCCACAACTCTCACCTGATCACCTCCTTCATTCACCAGCTCCAGAC
TCCCACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTGGCCGCGTTGG
AGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAACTTCGACAAC
CTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCGACCTTCTGCT
TGACAGCATCGAGGTGCACCACACCGAGACCAACAACTTCCAGTACTACC
AGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTGGCAGAACAAG
CGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGCTCCC
CGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGCCGCC
TGGACAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGCTCGCCAGGTC
GACAGCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCGTCAAGGGCAA
CCTGCTTCCGGGTGAGACGGCCAAATAGGTGGTGATGAAGATCATCAAGC
ACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCGGTATG
GATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCCGTCGT
TGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACCCGGCTG
CTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAGATGGTC
CGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGTACAC
TAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAACCAGT
TCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCACGAC
GTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCCTGTC
TCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAGGAGA
AAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGATGGCGGAGCTC
CAAAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGAGCTCCCCGTTGA
AATCCACAACTCTCACCTGATCACCTCCTTCATTCACCAGCTCCAGACTC
CCACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTGGCCGCGTTGGAG
TCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAACTTCGACAACCT
CTCCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCGACCTTCTGCTTG
ACAGCATCGAGGTGCACCACACCGAGACCAACAACTTCCAGTACTACCAG
CGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTGGCAGAACAAGCG
CAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGCTCCCCG
AGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGCCGCCTG
GACAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGCTCGCCAGGTCGA
CAGCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCGTCAAGGGCAACC
TGCTTCCGGGTGAGACGGCCAAATAGGTGGTGATGAAGATCATCAAGCAC
GGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCGGTATGGA
TGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCCGTCGTTG
AGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACCCGGCTGCT
GCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAGATGGTCCG
TATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGTACACTA
GCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAACCAGTTC
TTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCACGACGT
CAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCCTGTCTC
CTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAGGAGAAA
GAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGATGGCGGAGCTCCA
AAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGAGCTCCCCGTTGAAA
TCCACAACTCTCACCTGATCACCTCCTTCATTCACCAGCTCCAGACTCCC
ACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTGGCCGCGTTGGAGTC
GTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAACTTCGACAACCTCT
CCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCGACCTTCTGCTTGAC
AGCATCGAGGTGCACCACACCGAGACCAACAACTTCCAGTACTACCAGCG
GTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTGGCAGAACAAGCGCA
AGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGCTCCCCGAG
GACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGCCGCCTGGA
CAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGCTCGCCAGGTCGACA
GCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCGTCAAGGGCAACCTG
CTTCCGGGTGAGACGGCCAAATAGGTGGTGATGAAGATCATCAAGCACGG
CTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCGGTATGGATG
TCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCCGTCGTTGAG
GTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACCCGGCTGCTGC
TGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAGATGGTCCGTA
TGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGTACACTAGC
GCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAACCAGTTCTT
TTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCACGACGTCA
GCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCCTGTCTCCT
AAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAGGAGAAAGA
AGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGATGGCGGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_104900ATCC64974_104900Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104900-T1ATCC64974_104900-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104900-T1.cdsATCC64974_104900-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104900-T1.exon4ATCC64974_104900-T1.exon4Aspergillus niger N402exon
ATCC64974_104900-T1.exon3ATCC64974_104900-T1.exon3Aspergillus niger N402exon
ATCC64974_104900-T1.exon2ATCC64974_104900-T1.exon2Aspergillus niger N402exon
ATCC64974_104900-T1.exon1ATCC64974_104900-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteMEROPS:MER0021886
DBxrefInterPro:IPR027524
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR000555
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2915299..2916597 -
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