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ATCC64974_105050-T1, ATCC64974_105050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105050-T1
Unique NameATCC64974_105050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2949941..2950728-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105050-T1 ID=ATCC64974_105050-T1|Name=ATCC64974_105050-T1|organism=Aspergillus niger N402|type=mRNA|length=788bp|location=Sequence derived from alignment at OGUI01000017.1:2949941..2950728- (Aspergillus niger N402)
ATGTTTAAGAAGGAGTGAGTGAAAACCAGCATAGTCATTACTACAGAACA
CCCATCAACTTCATCCATTTATTCCCCAATCCACCACCCTCCCTACAGCC
CAATCCCTCCTCACAGCTAGCTACCAAGCAGAACAACCAACTAACAACTC
AAACCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAAT
CCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGC
TTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGC
CGTGAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCC
CCCTTCCCACAAACTAACTAACCCAACCCAACCCATAGTCCGGAAAGATC
AACCCTCTACACCCACAACAACACCCCCCTCTTCTACCAACCCATGGACG
GCCCACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTGACGCTCTC
CCGACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTCTCGGGCGC
GGCGCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATTGCCTGATG
TCGAGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGGCGGTGAAG
GCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAGGTGGGTAC
GGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGAGGGGCATT
ATTTGGGGGATGGGTTGTGGAGGTATCATCTTGATTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2949941..2950728-

>ATCC64974_105050-T1 ID=ATCC64974_105050-T1|Name=ATCC64974_105050-T1|organism=Aspergillus niger N402|type=CDS|length=1665bp|location=Sequence derived from alignment at OGUI01000017.1:2949941..2950728- (Aspergillus niger N402)
TCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCCCTCTTCTACC
AACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCTCCACGCATAC
CCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCATCCGCTTCGT
GCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTA
GATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTC
GTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTT
GAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTG
ATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCATCTTGATTGA
CATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTCCGTGCAGCGCGGCC
TCCGCCAACGGTTCCTAGACACATACCCCGGCTTCGAACCCTACATTGAA
GAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGTGAAGCTATGTTTAAG
AAGGATCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCCCTCTT
CTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCTCCACG
CATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCATCCGC
TTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGTGCCGG
GGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGCGGGTG
AGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGG
GTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGT
GCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCATCTTG
ATTGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTCCGTGCAGCG
CGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCGAACCCTACA
TTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGTGAAGCTATGT
TTAAGAAGGATCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCC
CTCTTCTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCT
CCACGCATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCA
TCCGCTTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGT
GCCGGGGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGC
GGGTGAGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGG
TCGGGGTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGT
GTGGTGCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCA
TCTTGATTGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTCCGTG
CAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCGAACC
CTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGTGAAGC
TATGTTTAAGAAGGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105050ATCC64974_105050Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105050-T1ATCC64974_105050-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105050-T1.cdsATCC64974_105050-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105050-T1.exon3ATCC64974_105050-T1.exon3Aspergillus niger N402exon
ATCC64974_105050-T1.exon2ATCC64974_105050-T1.exon2Aspergillus niger N402exon
ATCC64974_105050-T1.exon1ATCC64974_105050-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264RQY
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR016437
DBxrefInterPro:IPR004521
DBxrefInterPro:IPR041366
DBxrefInterPro:IPR036974
DBxrefInterPro:IPR002478
DBxrefPFAM:PF01472
DBxrefPFAM:PF17832
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2949941..2950728 -
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