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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3001771..3003356- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_105240-T1 ID=ATCC64974_105240-T1|Name=ATCC64974_105240-T1|organism=Aspergillus niger N402|type=mRNA|length=1586bp|location=Sequence derived from alignment at OGUI01000017.1:3001771..3003356- (Aspergillus niger N402)
ATGGCTACCAATTCATTCCGCGATACGGTCAACTCCTTGGGTTGGTCGCG
ACGAGACCCAGATCTCTCCACCCGCACCAACTCGTCGAATACGCCATTCC
TCTCACGGTTACAGTCTTGGAATCCATTTGGTCAAGGGGAGGGCTATCTG
CAACTACCTACTCATGAAGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCG
CCGAGAGGAGGAAGATACTTTCTTTGCCTGTAAGTCCTCCGAACGCATGA
CCGATTTTCCGTAAAGATGCTTTCTTCCTTGATTTGCTGCACTGCCCAGT
CCAGGTGACAGAGACTCAGTTCCTGCATCTGTCCGGGTTCCACGGAAGCC
CTAGGAAAAGCTGAGTGATGTACTCTCCTCTCTATCTACCTATGGGACTA
TTCTTTGTCATCTACCGTTTAATTTTCCTATTTTCCATTTTTCGTTTCTT
TTTCTTTTTTTCTGCGCTTCTACGCATTTTCTATTTTTCTTCTTGCCGCC
CTACCTCCTCCTCTTTTAACTTTTGGCTAATGCTAATCATACATTCCCTT
TACAGTAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACCTTG
GTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTATCG
CTGAAACCCCGCAAATTTGCCATCCTGTAAGTTACTCTACAGATTCCCCG
TCGATCTTCATCGAACCCCAATACATCCCCTACTTCGCCCACCCACCGGG
GAGGGAGGCACGAGGCGGTGGAGTGCTTGTCATGCCCTCCTCACTGGGGA
CTATGCACCACGCGTCTCCGATCCGACTACATTCCAGCGTCTGTGCTGAA
CCCCCCATCACGCCTCACCCATACTGTTTGCCAAGAAACTTCTTGTGAAT
CTGTGGCTGACCGAACCGGTTTTACCTCTTGAACTAGGTGGTCGGTTGGT
TCCTTGCTCTTTCTCCTATCATGGGCAGTCCTCATGGGACCCTGGGTCTA
CGCGAAACATCTGGTCTCGGGACCACGTCTGCCCTTCACGGCGGCCTATT
TCGGCTCGATCGCCATGACTTTGTACTTTGCTATCGGAGTAAGTACCCCT
GTTTGTTTGGCTCTAGCTACATTTCCCAGGATCTTCCCTGCCAGACCATG
TTGTCTATGCCTGTACTATCTGAGCGTACGCCTCTGCGATCGCATACCAA
CCTGTCGATTTCGAGGATCTTGCATACCTGGGGCGTGCGCGTACACTCGG
AGCCTTCAGCCGACGAAATGACATCATAATGCACCGCCACCCCGGTCGTG
GATATGATCTCTCACATCGTCCTGCAACAGTAGCAGGTTGGATGTGCATG
CGCTACTGTAGACCCCAGTCGGGCCCGTGCACATAAGAAAACCAGCGGGA
ATACCGGTCGCTAACCGTCTCTGTCCTCTCTAGCTTCATTCAACCCTGTT
GACGCTCATCTCGTCGGTGTTTCAGCTGGCTGCCCTGCTCTGGTACCTTG
TCAGCTACTTCCCTATGGGTAGCACTGGACTGCAGTTTATGGGAAGATTC
GGAGCTCAGCGTGTCACTTCGTGGATGACCAGCTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3001771..3003356- >ATCC64974_105240-T1 ID=ATCC64974_105240-T1|Name=ATCC64974_105240-T1|organism=Aspergillus niger N402|type=CDS|length=2616bp|location=Sequence derived from alignment at OGUI01000017.1:3001771..3003356- (Aspergillus niger N402)
CTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTTTCAGCTGGCTGC
CCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTAGCACTGGACTGC
AGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCGTGGATGACCAGC
TGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGCAGTCCTCA
TGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCACGTCTGCCC
TTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTACTTTGCTAT
CGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACCTTGG
TGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTATCGC
TGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATTCATTCCGCGATA
CGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCTCCACCCGC
ACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCTTGGAATCC
ATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGAAGCTCCAG
GAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATACTTTCTTT
GCCTCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTTTCAGCTGG
CTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTAGCACTGGA
CTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCGTGGATGAC
CAGCTGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGCAGTC
CTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCACGTCT
GCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTACTTTG
CTATCGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACC
TTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTA
TCGCTGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATTCATTCCGC
GATACGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCTCCAC
CCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCTTGGA
ATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGAAGCT
CCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATACTTT
CTTTGCCTCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTTTCAG
CTGGCTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTAGCAC
TGGACTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCGTGGA
TGACCAGCTGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGC
AGTCCTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCAC
GTCTGCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTAC
TTTGCTATCGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGC
AACCTTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGT
TCTATCGCTGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATTCATT
CCGCGATACGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCT
CCACCCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCT
TGGAATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGA
AGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATA
CTTTCTTTGCCTCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTT
TCAGCTGGCTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTA
GCACTGGACTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCG
TGGATGACCAGCTGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCAT
GGGCAGTCCTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGA
CCACGTCTGCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTT
GTACTTTGCTATCGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGC
ATGCAACCTTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCC
CGGTTCTATCGCTGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATT
CATTCCGCGATACGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGAT
CTCTCCACCCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACA
GTCTTGGAATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTC
ATGAAGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAA
GATACTTTCTTTGCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_105240-T1 | ATCC64974_105240-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007305 |
| DBxref | PFAM:PF04178 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3001771..3003356 - |
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