You are here

Home

ATCC64974_10540-T1, ATCC64974_10540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_10540-T1
Unique NameATCC64974_10540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:972577..974274-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_10540-T1 ID=ATCC64974_10540-T1|Name=ATCC64974_10540-T1|organism=Aspergillus niger N402|type=mRNA|length=1698bp|location=Sequence derived from alignment at OGUI01000002.1:972577..974274- (Aspergillus niger N402)
ATGACGGACGATTACTTCAACCTAGGCTCGTACAGCCGAACCGTAACGAC
CAACTCCCCCGACGCCCAGCTATGGTTTAACCGCGGACTTGTCTGGTCAT
ACTCCTTCAATCACGAAGAAGCGTCCCGTTGTTTCATCAAAGCCAGCAAG
GCCGATGAGAATTGTGCCATGGCGTACTGGGGCCTGGCCTATGCCCGTGG
ACCAAACTACAACAAGGCCTGGATTCGTTTCGACCTAGCGGATCTGGCCA
CCACTATTACGGAAATGAGACCCGTGCTCCAACGCGCCCAGGCCCTGGCA
GCACAGGGGGCAAGTCCGGCCGAAAGGGCTGTAATTGAGGCCTTGAAGGC
TCGATTTCCCAAAGATGATGATGAAACGAAGCCAGAAAACCTGGATCTTC
ATGCGTTGGATCGTGCCTATGCAGAAGCCATGCGACCTGTCTACGAAGCT
TATCCGGAGGACCCTGATATTGTGGCTCTTTTTGTCGAGGCGCTCATGTG
CATATCCCCACGGGCTCTGTGGAATCTTGACACTGGTGAACCCTGTGGTC
CGCATACCACTGAGGCTCGTCGGGTTCTTGAGAAGGCCATGACCTCCCTT
CCTGGGGGCAGTAGCAACCCTGCATACTGCCATCTCTATATCCATCTCAT
GGAGATGGCGCCGTATCCGGAGATTGCTTTACCAGCTGCGGATCGCCTTC
TGCGACTCGTGCCGGATGGTTCGCATATGCTGCATATGCCTAGCCATATT
TACGTCGCCTGTGGTGACTACCGAGCGGTCATTGATTCGAACAACCAGGC
CATGGTTGTCGACGACAAGTACTTTGCCAGGGAGCCGGGCACCATCTTAT
ATATTATGTACCGAGCGCACAACATCTACGTGAAGGTCTATGGCGCAGTC
ATCTCCGGAAACTTTGCAGAGGCAATCTCCGGTATGAAGCGCCTTCAGGA
GATCCTCACTCCCGAGCTTTTGTCTATAACCAGCCCTCCGATCGCCAATT
GGGCAGAAGGGTTTCTGGGCGCCATAGCCCATGTGTTGATCCGCTTTGGA
CGGTGGGATGATATATTAGACTTAAAGCTCCCCGAGGACAAGGAGCTATT
TGCCTCTACGACAGCGATGATATACTATGCCCGCGGCATTGCTTTGGCGG
TATTGAATCGAGTGGACGAGGCCCAAGAAGAAAGGAAGAAATTTGAGGCT
GCCCGCGAAAAGGTTCCACCATCTCGCTTGAACAGTCTGCCCGTTCGCGA
GGTGGACGTCCTTGAGATCGGGTCGGCTATGCTGAAAGGAGAGATCGAGT
ATCGCCAGGGCAACTTTGAGGAGGCTTTCAATCACTTGAGACAAGCGACA
AAGCTGGAGGATAACCTGGTCTATGCGGATCCTCCGCCGTGGATGCAGCC
TGCGCGACATGCCCTGGGGGCTTTGCTTCTTGAACAGGGTCATGTTAGCG
AAGCACAGCATGTGTATGAAGAAGATCTGGGATTGAGTGAGACCCTCCCA
CGTCGGAAGGCAAGACTGAATAATGTCTGGAGTTTGCATGGCTTGTATGA
GTGTCAGGTCCGGCAAGGGTTGCACGACAAGGCCCGGTATATCCGTGCTC
AACGCGACGTTGCGCTGGCTTCGGCGGATGTTCCCATCAATGCTTCGTGT
TTCTGTCGTCTTTCGGCGGTTGAGTCGACCAGCGCTTGTTGTAAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:972577..974274-

>ATCC64974_10540-T1 ID=ATCC64974_10540-T1|Name=ATCC64974_10540-T1|organism=Aspergillus niger N402|type=CDS|length=1698bp|location=Sequence derived from alignment at OGUI01000002.1:972577..974274- (Aspergillus niger N402)
ATGACGGACGATTACTTCAACCTAGGCTCGTACAGCCGAACCGTAACGAC
CAACTCCCCCGACGCCCAGCTATGGTTTAACCGCGGACTTGTCTGGTCAT
ACTCCTTCAATCACGAAGAAGCGTCCCGTTGTTTCATCAAAGCCAGCAAG
GCCGATGAGAATTGTGCCATGGCGTACTGGGGCCTGGCCTATGCCCGTGG
ACCAAACTACAACAAGGCCTGGATTCGTTTCGACCTAGCGGATCTGGCCA
CCACTATTACGGAAATGAGACCCGTGCTCCAACGCGCCCAGGCCCTGGCA
GCACAGGGGGCAAGTCCGGCCGAAAGGGCTGTAATTGAGGCCTTGAAGGC
TCGATTTCCCAAAGATGATGATGAAACGAAGCCAGAAAACCTGGATCTTC
ATGCGTTGGATCGTGCCTATGCAGAAGCCATGCGACCTGTCTACGAAGCT
TATCCGGAGGACCCTGATATTGTGGCTCTTTTTGTCGAGGCGCTCATGTG
CATATCCCCACGGGCTCTGTGGAATCTTGACACTGGTGAACCCTGTGGTC
CGCATACCACTGAGGCTCGTCGGGTTCTTGAGAAGGCCATGACCTCCCTT
CCTGGGGGCAGTAGCAACCCTGCATACTGCCATCTCTATATCCATCTCAT
GGAGATGGCGCCGTATCCGGAGATTGCTTTACCAGCTGCGGATCGCCTTC
TGCGACTCGTGCCGGATGGTTCGCATATGCTGCATATGCCTAGCCATATT
TACGTCGCCTGTGGTGACTACCGAGCGGTCATTGATTCGAACAACCAGGC
CATGGTTGTCGACGACAAGTACTTTGCCAGGGAGCCGGGCACCATCTTAT
ATATTATGTACCGAGCGCACAACATCTACGTGAAGGTCTATGGCGCAGTC
ATCTCCGGAAACTTTGCAGAGGCAATCTCCGGTATGAAGCGCCTTCAGGA
GATCCTCACTCCCGAGCTTTTGTCTATAACCAGCCCTCCGATCGCCAATT
GGGCAGAAGGGTTTCTGGGCGCCATAGCCCATGTGTTGATCCGCTTTGGA
CGGTGGGATGATATATTAGACTTAAAGCTCCCCGAGGACAAGGAGCTATT
TGCCTCTACGACAGCGATGATATACTATGCCCGCGGCATTGCTTTGGCGG
TATTGAATCGAGTGGACGAGGCCCAAGAAGAAAGGAAGAAATTTGAGGCT
GCCCGCGAAAAGGTTCCACCATCTCGCTTGAACAGTCTGCCCGTTCGCGA
GGTGGACGTCCTTGAGATCGGGTCGGCTATGCTGAAAGGAGAGATCGAGT
ATCGCCAGGGCAACTTTGAGGAGGCTTTCAATCACTTGAGACAAGCGACA
AAGCTGGAGGATAACCTGGTCTATGCGGATCCTCCGCCGTGGATGCAGCC
TGCGCGACATGCCCTGGGGGCTTTGCTTCTTGAACAGGGTCATGTTAGCG
AAGCACAGCATGTGTATGAAGAAGATCTGGGATTGAGTGAGACCCTCCCA
CGTCGGAAGGCAAGACTGAATAATGTCTGGAGTTTGCATGGCTTGTATGA
GTGTCAGGTCCGGCAAGGGTTGCACGACAAGGCCCGGTATATCCGTGCTC
AACGCGACGTTGCGCTGGCTTCGGCGGATGTTCCCATCAATGCTTCGTGT
TTCTGTCGTCTTTCGGCGGTTGAGTCGACCAGCGCTTGTTGTAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_10540ATCC64974_10540Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10540-T1.cdsATCC64974_10540-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10540-T1.exon1ATCC64974_10540-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10540-T1ATCC64974_10540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:972577..974274 -
Powered by Drupal