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ATCC64974_105510-T1, ATCC64974_105510-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105510-T1
Unique NameATCC64974_105510-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3084324..3085085-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105510-T1 ID=ATCC64974_105510-T1|Name=ATCC64974_105510-T1|organism=Aspergillus niger N402|type=mRNA|length=762bp|location=Sequence derived from alignment at OGUI01000017.1:3084324..3085085- (Aspergillus niger N402)
ATGCAGACAACTCTAGGACGGGCTTTATCGAAAATGACCAAACCACTACT
CCTCCATGCCCACGCTACGGGCCCTAACCCCATCAAGATCGCCATCGCTC
TCGAAGCCCTCCAAGTCCCCTACGAAGTCCAACAGTGGGAGTTTGGCGAC
GACCCCCAAAAAGGCGTCAAAGGCGAGGCTTACTTAAAGATCAACGAGAA
TGGTCGGCTTCCCTCTCTCCAGGACCCGAACACGGGCGTCGTGGCCTGGG
AATCTGGCGCATGCATGAATTACGTCCGCCGAGTGTATGACCGCGACGGA
CAGTTAGGTCCAGTTGGTAAGACAGAGCAGGATATCGTCGACTTGGAGAA
ATGGGAGTATTTCCTGCTCACCAATCTGGCGCCTATGCTGGGCCAGGTTA
ACTGGTTTAGGTATTTCTGCCCTCCTTGTCGCCTAGTTGGTTGACGAGCG
AATCGTGCTAACGTAACACTAAGGAACTACCATGCGGTGAAGAACCAGGA
TGCGCTGAATAGATATACGGAGCAGGCTTATCGCTGCTTCGGGGTGTTGG
AAGGGCAGTTGAAGAAATCGAATGGAGAGAGTGTTCTGCCTGGAAAAATT
ACCGCTGTGGATTATCATTCGGAGCCTTGGGTGAGGCAGTATTCTTTTGC
GGGGCTGTCTTTGGATTCCTACCCCCTCATTCAGCGTTGGCTGGCTGGGA
TGGCTGGCCGGGAGGAGGTGAAGAGAGCTTATGTGGAGATCAAGGGGAAG
GGCCCAGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3084324..3085085-

>ATCC64974_105510-T1 ID=ATCC64974_105510-T1|Name=ATCC64974_105510-T1|organism=Aspergillus niger N402|type=CDS|length=1398bp|location=Sequence derived from alignment at OGUI01000017.1:3084324..3085085- (Aspergillus niger N402)
GAACTACCATGCGGTGAAGAACCAGGATGCGCTGAATAGATATACGGAGC
AGGCTTATCGCTGCTTCGGGGTGTTGGAAGGGCAGTTGAAGAAATCGAAT
GGAGAGAGTGTTCTGCCTGGAAAAATTACCGCTGTGGATTATCATTCGGA
GCCTTGGGTGAGGCAGTATTCTTTTGCGGGGCTGTCTTTGGATTCCTACC
CCCTCATTCAGCGTTGGCTGGCTGGGATGGCTGGCCGGGAGGAGGTGAAG
AGAGCTTATGTGGAGATCAAGGGGAAGGGCCCAGAGTAAATGCAGACAAC
TCTAGGACGGGCTTTATCGAAAATGACCAAACCACTACTCCTCCATGCCC
ACGCTACGGGCCCTAACCCCATCAAGATCGCCATCGCTCTCGAAGCCCTC
CAAGTCCCCTACGAAGTCCAACAGTGGGAGTTTGGCGACGACCCCCAAAA
AGGCGTCAAAGGCGAGGCTTACTTAAAGATCAACGAGAATGGTCGGCTTC
CCTCTCTCCAGGACCCGAACACGGGCGTCGTGGCCTGGGAATCTGGCGCA
TGCATGAATTACGTCCGCCGAGTGTATGACCGCGACGGACAGTTAGGTCC
AGTTGGTAAGACAGAGCAGGATATCGTCGACTTGGAGAAATGGGAGTATT
TCCTGCTCACCAATCTGGCGCCTATGCTGGGCCAGGTTAACTGGTTTAGG
AACTACCATGCGGTGAAGAACCAGGATGCGCTGAATAGATATACGGAGCA
GGCTTATCGCTGCTTCGGGGTGTTGGAAGGGCAGTTGAAGAAATCGAATG
GAGAGAGTGTTCTGCCTGGAAAAATTACCGCTGTGGATTATCATTCGGAG
CCTTGGGTGAGGCAGTATTCTTTTGCGGGGCTGTCTTTGGATTCCTACCC
CCTCATTCAGCGTTGGCTGGCTGGGATGGCTGGCCGGGAGGAGGTGAAGA
GAGCTTATGTGGAGATCAAGGGGAAGGGCCCAGAGTAAATGCAGACAACT
CTAGGACGGGCTTTATCGAAAATGACCAAACCACTACTCCTCCATGCCCA
CGCTACGGGCCCTAACCCCATCAAGATCGCCATCGCTCTCGAAGCCCTCC
AAGTCCCCTACGAAGTCCAACAGTGGGAGTTTGGCGACGACCCCCAAAAA
GGCGTCAAAGGCGAGGCTTACTTAAAGATCAACGAGAATGGTCGGCTTCC
CTCTCTCCAGGACCCGAACACGGGCGTCGTGGCCTGGGAATCTGGCGCAT
GCATGAATTACGTCCGCCGAGTGTATGACCGCGACGGACAGTTAGGTCCA
GTTGGTAAGACAGAGCAGGATATCGTCGACTTGGAGAAATGGGAGTATTT
CCTGCTCACCAATCTGGCGCCTATGCTGGGCCAGGTTAACTGGTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105510ATCC64974_105510Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105510-T1ATCC64974_105510-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105510-T1.cdsATCC64974_105510-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105510-T1.exon2ATCC64974_105510-T1.exon2Aspergillus niger N402exon
ATCC64974_105510-T1.exon1ATCC64974_105510-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3084324..3085085 -
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