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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3088762..3089922- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_105530-T1 ID=ATCC64974_105530-T1|Name=ATCC64974_105530-T1|organism=Aspergillus niger N402|type=mRNA|length=1161bp|location=Sequence derived from alignment at OGUI01000017.1:3088762..3089922- (Aspergillus niger N402)
ATGTACAGTCTCCTAGGGCTCCTCGCTGCGCTGGGCTGCGCGCAGTCCGC
CCTCGCAGCCCCCCTAGCCAGCCCCCCAAACTCTTCCTACATCGACTGGC
GCACCTTCAAAGGCAACGGCGTCAACCTCGGCGGCTGGCTCGAGCAAGAA
TCGACAATAGACAGTCTATTCTGGGATAAATATTCTGGCGGCGCCTCAGA
CGAATGGGGCCTCTGCGAACATCTAGGCTCACAATGCGGCCCCGTCCTCG
AGCACCGCTACGCAACCTGGATCACCAAGGCCGACATTGACAAGCTCGCC
TCCGGCGGTATCACAGTCCTGCGCATCCCCACCACCTATGCCGCATGGAT
CGATCTCCCCAGCTCGCAGCTCTACTCGGGAAACCAAACGGCCTACCTCA
AAGAAATCGCCGACTACGCCATCAAGACTTACAACATGCACATCATCATC
GACACGCACTCCCTCCCCGGCGGCGTCAACGGCCTGACCATCGGCGAAGC
CACCGGCCACTGGTACTGGTTCTACAACGAGACCAACTTCAACTACTCCA
TGCAAGTGATCGATCAAGTCATCAACTTCATCCAAACCTCGGGATCCCCG
CAATCCTACACCCTCGAGCCCATCAACGAACCCGCCGACAACAACACCAA
CATGGTCGTCTTCGGCACGCCCCTCGCCCTGACGGACCACGGCGCCGCCT
GGGTCCTCAAGTACATCCGGGCTGTGGTTCAACGGGTCGAATCGGTGAAC
CCCAACATCCCCGTCATGTTCCAGGGTAGTTTCAAGTACCCGCAGTACTG
GGAGGGTGACTTCCCCGCCAGTACGAACCTCGTCTTCGACACGCATCATT
ATTACTACGAGCATATGGATTCCTCGTCGGAGAATCTGCCCGAGTATATT
CTTGCGGATGCGCGGGAGAAGTCGGGCACGGGCAAGTTCCCCGTGTTTGT
GGGCGAATGGGCAATCCAGGCGACGTATAATAATACGTTGGCGCTGCGGA
AGAGGAATGTGTTGGCGGGGTTGGAGACTTGGAGCAGTTTTTCGCAGGGG
AGTTCGTATTGGACGGCGAAGTTTACGGGGAATACGAGTGTCGCTGGACA
GGGGGAGCAGAAGGATTATTGGTGTTATGAGACGTTTATTGACGAGGGGT
ATTTCAATTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3088762..3089922- >ATCC64974_105530-T1 ID=ATCC64974_105530-T1|Name=ATCC64974_105530-T1|organism=Aspergillus niger N402|type=CDS|length=1161bp|location=Sequence derived from alignment at OGUI01000017.1:3088762..3089922- (Aspergillus niger N402)
ATGTACAGTCTCCTAGGGCTCCTCGCTGCGCTGGGCTGCGCGCAGTCCGC
CCTCGCAGCCCCCCTAGCCAGCCCCCCAAACTCTTCCTACATCGACTGGC
GCACCTTCAAAGGCAACGGCGTCAACCTCGGCGGCTGGCTCGAGCAAGAA
TCGACAATAGACAGTCTATTCTGGGATAAATATTCTGGCGGCGCCTCAGA
CGAATGGGGCCTCTGCGAACATCTAGGCTCACAATGCGGCCCCGTCCTCG
AGCACCGCTACGCAACCTGGATCACCAAGGCCGACATTGACAAGCTCGCC
TCCGGCGGTATCACAGTCCTGCGCATCCCCACCACCTATGCCGCATGGAT
CGATCTCCCCAGCTCGCAGCTCTACTCGGGAAACCAAACGGCCTACCTCA
AAGAAATCGCCGACTACGCCATCAAGACTTACAACATGCACATCATCATC
GACACGCACTCCCTCCCCGGCGGCGTCAACGGCCTGACCATCGGCGAAGC
CACCGGCCACTGGTACTGGTTCTACAACGAGACCAACTTCAACTACTCCA
TGCAAGTGATCGATCAAGTCATCAACTTCATCCAAACCTCGGGATCCCCG
CAATCCTACACCCTCGAGCCCATCAACGAACCCGCCGACAACAACACCAA
CATGGTCGTCTTCGGCACGCCCCTCGCCCTGACGGACCACGGCGCCGCCT
GGGTCCTCAAGTACATCCGGGCTGTGGTTCAACGGGTCGAATCGGTGAAC
CCCAACATCCCCGTCATGTTCCAGGGTAGTTTCAAGTACCCGCAGTACTG
GGAGGGTGACTTCCCCGCCAGTACGAACCTCGTCTTCGACACGCATCATT
ATTACTACGAGCATATGGATTCCTCGTCGGAGAATCTGCCCGAGTATATT
CTTGCGGATGCGCGGGAGAAGTCGGGCACGGGCAAGTTCCCCGTGTTTGT
GGGCGAATGGGCAATCCAGGCGACGTATAATAATACGTTGGCGCTGCGGA
AGAGGAATGTGTTGGCGGGGTTGGAGACTTGGAGCAGTTTTTCGCAGGGG
AGTTCGTATTGGACGGCGAAGTTTACGGGGAATACGAGTGTCGCTGGACA
GGGGGAGCAGAAGGATTATTGGTGTTATGAGACGTTTATTGACGAGGGGT
ATTTCAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_105530-T1.exon1 | ATCC64974_105530-T1.exon1 | Aspergillus niger N402 | exon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_105530-T1 | ATCC64974_105530-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH5_15 |
| Note | CAZy:GH5_44 |
| Note | CAZy:GH5 |
| Note | CAZy:GH5_9 |
| Note | CAZy:GH5_23 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001547 |
| DBxref | PFAM:PF00150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3088762..3089922 - |
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