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ATCC64974_105590-T1, ATCC64974_105590-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105590-T1
Unique NameATCC64974_105590-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3107589..3108419-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105590-T1 ID=ATCC64974_105590-T1|Name=ATCC64974_105590-T1|organism=Aspergillus niger N402|type=mRNA|length=831bp|location=Sequence derived from alignment at OGUI01000017.1:3107589..3108419- (Aspergillus niger N402)
ATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGA
GGAGGCCGGTGATGATGAGGTACGTTTTGACTGCTTGCGCTGAAAACCCA
AAGCTTGATGCTTTCTTTTGCTTGTTTCTTGGCTTGCTTCTATTTGACTT
GGCGATTTGTCTTTCACTGAATCTAGCTAACGTGACCTTCTTTTTTCATG
ACTTATAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGAA
TCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAATC
GGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTCG
TCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTTT
CAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCAC
CGGCCAGCCCAAGGGGTATGTTGCAGCGCATTCATTTGACAGGCTGGGGG
GCATCATATGCTGATATGATTTACAGATACGCCTATGTAGAATTTGCGGA
ACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCG
GCCGGAACCTGAAGGTAGATCGCATGATAGAGGCCATTGATCGACTGAAT
GATACTAATGCTCGATGCTTTACAGGTCGTTCCCAAGCGTACCAACCTGC
CGGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGG
GGGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCG
TGGCCGGGGTCGCGGCTATGCGCCCTACTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3107589..3108419-

>ATCC64974_105590-T1 ID=ATCC64974_105590-T1|Name=ATCC64974_105590-T1|organism=Aspergillus niger N402|type=CDS|length=2280bp|location=Sequence derived from alignment at OGUI01000017.1:3107589..3108419- (Aspergillus niger N402)
GTCGTTCCCAAGCGTACCAACCTGCCGGGCATGAGCCGCGGTCGTGGACG
AGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGGTGGATTTGCGCCCC
GTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTCGCGGCTATGCGCCC
TACTAAATACGCCTATGTAGAATTTGCGGAACCCAGTTTAGTGGCTCAGG
CCCTTGTCTTGAACGAGAGTGTCTTCCGCGGCCGGAACCTGAAGGAGGAG
ATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAA
GCTACGCGAGATGCAAGCCACGCTTGATCAGCAATCGGAGAACCTGCGTG
AGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGAC
TACGGTGCCTCTCCCGAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTC
AATAAACCGTGTCACTATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGG
GATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGG
AGGAGGCCGGTGATGATGAGGTCGTTCCCAAGCGTACCAACCTGCCGGGC
ATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTA
CCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCC
GGGGTCGCGGCTATGCGCCCTACTAAATACGCCTATGTAGAATTTGCGGA
ACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCG
GCCGGAACCTGAAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAA
ATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCA
GCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTG
TCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCA
CACTTTCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAA
GTTCACCGGCCAGCCCAAGGGATGGCTACGGAAGAGAACGAGATCAAGGA
TGAGCGCCTGCAACACCAGGAGGAGGCCGGTGATGATGAGGTCGTTCCCA
AGCGTACCAACCTGCCGGGCATGAGCCGCGGTCGTGGACGAGGTGGATTC
CGCGGTGGTGGCCGGGGGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTA
TCGCGGTGGCTACCGTGGCCGGGGTCGCGGCTATGCGCCCTACTAAATAC
GCCTATGTAGAATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTT
GAACGAGAGTGTCTTCCGCGGCCGGAACCTGAAGGAGGAGATTGCGGCGA
TGAAGAAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAG
ATGCAAGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGACAAAGA
GGAGATCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCT
CTCCCGAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAAACCGT
GTCACTATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATGGCTACG
GAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGAGGAGGCCGG
TGATGATGAGGTCGTTCCCAAGCGTACCAACCTGCCGGGCATGAGCCGCG
GTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGGTGGA
TTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTCGCGG
CTATGCGCCCTACTAAATACGCCTATGTAGAATTTGCGGAACCCAGTTTA
GTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCGGCCGGAACCT
GAAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGAATCCG
AGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAATCGGAG
AACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTCGTCGG
CAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTTTCAAA
GTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCACCGGC
CAGCCCAAGGGATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTG
CAACACCAGGAGGAGGCCGGTGATGATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105590ATCC64974_105590Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105590-T1ATCC64974_105590-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105590-T1.cdsATCC64974_105590-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105590-T1.exon4ATCC64974_105590-T1.exon4Aspergillus niger N402exon
ATCC64974_105590-T1.exon3ATCC64974_105590-T1.exon3Aspergillus niger N402exon
ATCC64974_105590-T1.exon2ATCC64974_105590-T1.exon2Aspergillus niger N402exon
ATCC64974_105590-T1.exon1ATCC64974_105590-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3107589..3108419 -
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