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ATCC64974_105650-T1, ATCC64974_105650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105650-T1
Unique NameATCC64974_105650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3119915..3120545-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105650-T1 ID=ATCC64974_105650-T1|Name=ATCC64974_105650-T1|organism=Aspergillus niger N402|type=mRNA|length=631bp|location=Sequence derived from alignment at OGUI01000017.1:3119915..3120545- (Aspergillus niger N402)
ATGGGTAAGGGACAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGAC
CACCCGTCGCGAGAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCC
TCGGTACTGCCTACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAG
GGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGC
TATTCGCAAGTGTGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTA
CCGCTTTCGGTGGGTGATCCTATCCTTTTCTTTTTCTATTTCCCGGTTGT
GATGGATGTTTATGGTTTGGGGATTTTGTGATGGGATATTGTGCGGAGAA
TGGAGCAGAAGAAGGAGAAGGGAATAAAGGACGGAGTGGCAAACGGGAAA
TATCGCATATTCTTTAAGAGGGTATCGATTGGCTAACATATTTCCTGTAT
AGTCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCC
TCCTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGT
GTCCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTG
GAAGGAGAAGAAGGAGAAGCCCCGCTCTTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3119915..3120545-

>ATCC64974_105650-T1 ID=ATCC64974_105650-T1|Name=ATCC64974_105650-T1|organism=Aspergillus niger N402|type=CDS|length=876bp|location=Sequence derived from alignment at OGUI01000017.1:3119915..3120545- (Aspergillus niger N402)
TCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTC
CTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGT
CCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGA
AGGAGAAGAAGGAGAAGCCCCGCTCTTAAATGGGTAAGGGACAGCCCCGT
GGTTTGAACGCCGCCCGCAAGCTCGCGACCACCCGTCGCGAGAACCGCTG
GGCCGATCTGCACTACAAGAAGCGCCTCCTCGGTACTGCCTACAAGTCCT
CTCCCTTCGGAGGTGCCTCCCACGCCAAGGGTATCGTTCTTGAGAAGGTC
GGTGTTGAGGCCAAGCAGCCCAACTCCGCTATTCGCAAGTGTGTCAAGGT
CCAGCTCATCAAGAACGGCAAGAAGGTTACCGCTTTCGTCCCCAACGATG
GTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTCCTCGCCGGTTTC
GGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGTCCGTTTCAAGGT
CGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGAAGGAGAAGAAGG
AGAAGCCCCGCTCTTAAATGGGTAAGGGACAGCCCCGTGGTTTGAACGCC
GCCCGCAAGCTCGCGACCACCCGTCGCGAGAACCGCTGGGCCGATCTGCA
CTACAAGAAGCGCCTCCTCGGTACTGCCTACAAGTCCTCTCCCTTCGGAG
GTGCCTCCCACGCCAAGGGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCC
AAGCAGCCCAACTCCGCTATTCGCAAGTGTGTCAAGGTCCAGCTCATCAA
GAACGGCAAGAAGGTTACCGCTTTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS23ATCC64974_105650Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105650-T1ATCC64974_105650-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105650-T1.cdsATCC64974_105650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105650-T1.exon2ATCC64974_105650-T1.exon2Aspergillus niger N402exon
ATCC64974_105650-T1.exon1ATCC64974_105650-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005680
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Product40S ribosomal protein S23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3119915..3120545 -
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