|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3123562..3124242+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_105680-T1 ID=ATCC64974_105680-T1|Name=ATCC64974_105680-T1|organism=Aspergillus niger N402|type=mRNA|length=681bp|location=Sequence derived from alignment at OGUI01000017.1:3123562..3124242+ (Aspergillus niger N402)
ATGGCCGGAGGTGCTACCAAGTTCCGCCATTTGAGCCGCAAGTCCTCTCA
CAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAAT
CCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAG
AAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGC
ATTGTCGACGTTTTATGTATGACGCAGTCCTTATCTTCTCTTTCTCAAAC
ACATACATACATACCGTGGAGGACATACGATAGAGGAAAGCGAACATTTT
CAACTAACCAAGGAATAATAGACCCCCCACGAACTCCTCCCCAAACTCTT
CGGTCCTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACACGCGAG
TTCTGCGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAATCCTG
GAGTTGGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCGCGGAC
GGTTGCTAGACAGCGGTCTCAGGGCTTGGAGACCCTCAATGAACTCACTA
CGATGAATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTGCTGAT
CTGGAGAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAGGAGGA
CGCGGGGAAGGCGAAGCCTGCGAAGCAATAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3123562..3124242+ >ATCC64974_105680-T1 ID=ATCC64974_105680-T1|Name=ATCC64974_105680-T1|organism=Aspergillus niger N402|type=CDS|length=1152bp|location=Sequence derived from alignment at OGUI01000017.1:3123562..3124242+ (Aspergillus niger N402)
ATGGCCGGAGGTGCTACCAAGTTCCGCCATTTGAGCCGCAAGTCCTCTCA
CAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAAT
CCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAG
AAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGC
ATTGTCGACGTTTTATACCCCCCACGAACTCCTCCCCAAACTCTTCGGTC
CTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACACGCGAGTTCTG
CGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAATCCTGGAGTT
GGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCGCGGACGGTTG
CTAGACAGCGGTCTCAGGGCTTGGAGACCCTCAATGAACTCACTACGATG
AATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTGCTGATCTGGA
GAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAGGAGGACGCGG
GGAAGGCGAAGCCTGCGAAGCAATAAATGGCCGGAGGTGCTACCAAGTTC
CGCCATTTGAGCCGCAAGTCCTCTCACAGACAGGCTCTGCTCCGCAACCT
CGTCACCTCCCTCTTCCAGCATGAATCCATCACAACCACATGGGCCAAGG
CCAAGGAGGCGCAACGACTGGCCGAGAAGTTGATCACCCTGGGCAAGAAG
AACACCGAAGCCAGTCGGAAACGCGCATTGTCGACGTTTTATACCCCCCA
CGAACTCCTCCCCAAACTCTTCGGTCCTCTTCGTGAACGCTACGCCGAAC
GCCCCGGTGGCTACACGCGAGTTCTGCGCGTCGAACCCAAGAAGGACGAT
CAAGCCGCCAGCGCAATCCTGGAGTTGGTAGATGGACCTAAAGATATGCG
GTTTGCTTTGACGGCGCGGACGGTTGCTAGACAGCGGTCTCAGGGCTTGG
AGACCCTCAATGAACTCACTACGATGAATGTCAATAAGGTCACACGGTTC
CGGAAAGGAGGGATTGCTGATCTGGAGAGGGAGATCAAGCGGTTAGAGAT
CACGGGTCACGGGAAGGAGGACGCGGGGAAGGCGAAGCCTGCGAAGCAAT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_105680-T1 | ATCC64974_105680-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264MZ1 |
| DBxref | InterPro:IPR036373 |
| DBxref | InterPro:IPR000456 |
| DBxref | PFAM:PF01196 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3123562..3124242 + |
|
