You are here

Home

ATCC64974_105850-T1, ATCC64974_105850-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105850-T1
Unique NameATCC64974_105850-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3160552..3161974-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105850-T1 ID=ATCC64974_105850-T1|Name=ATCC64974_105850-T1|organism=Aspergillus niger N402|type=mRNA|length=1423bp|location=Sequence derived from alignment at OGUI01000017.1:3160552..3161974- (Aspergillus niger N402)
ATGTCGGAAGAAGACAAGACTGTAGGTTGTCCTCTATATCCGCTCCTTAT
ACCTCATGCCGGCCACTCACTAGCAGCCAGACCCCCAATAAACTCTCCAC
TGGACCACTCAGTCCCAAACCCGAGTCGCCGACTACCGCGCGCCCTCTAG
ATTTTGATGATGAACCTCAGGAAACCGGTGTCACTGCAGCACCGTCAACA
GCCCCTGCTCAGCAGGGCGCTGCGGAAGCTGCCCCGCCTAAGCCACCCCG
CCCATTGAGCCCCCGGCAAGAGGCCGAGAATACCCTCAAGGAAGCATTCC
CCTCTATCGAGGCATCGGTGATCAAAGCAGTGTTGGTGGCCAGTAACTGG
GATGTGGAACGGTCATTCCATGCTTTGCTTAGTACGTGTGAACTGCGACG
GAAAGCACTGCTATGCGCGGTCACTAACAAGTCCCTCTAGGCATGACGGA
TCCCAGTGCTGTCGAACAAGATGCGCCGCCCCCGAAGCCACCACGCCCAA
CTGCTGCGCAGAGGCAGCTAGAAGCAGATGAGATGTATGCCCGTCAGCTG
GCCGAGCACTACAACCGTCCTGCGCGCCAACCCCGTTGGGACAACGAGTA
CCCACAGCAGCGGCCACGAAGAGGAAGCGATGGATCGGAGGAAAAAGAAT
ACAGCTTTTTCGATGGTCAGTGATATGGATCTTTTCTACGTCATCTTGGT
TGCTAAATGATGGCCTGTATAGATGATCTCCCTGTGATCCGTGAGAACCT
TCGCAAAGGATTCTTGGATACCCAGACGAAGGTCAACTCGTGGGTCCAGA
ATCTGAAGAAACGCCTCGATGGCGAAACACCTGAGGCCGGACCTTCTGGT
CAAGGCCAGCCCGATGAGAACTATGGTAGACCTAGACGGAGCGGGGACCT
AGGTCGTCGGAGCGGCGATCGCGAACGCTACGATGCCGATCATCGCATCC
TGAACGACGACTTTTCCTCACTTGAACTGAGAGATGCGGAAGGTACGGTT
ACCCCGATCAGACCCTGATCATGCATCAAATTCGCTAGCGAATGCTAACC
TCCGTTCGCAGCTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAATCCCG
ATCTTTTCAAAACCTCTTCATCTTCCCCTGATCGACGCAAGGTCTCCTTC
CAGGAGGGACCACCTACCGAGATTGACAACCTCTACGATGCCTCTGAGCC
CGTCAGACGTACGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCAACCTC
TGTCGACTGTTGACCCTTCGCCGGTCGGGGAACATGACCCGTTCAGTCTT
GGGGACAGTGACGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAGCAGAG
CACAGCTGAGGCTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAGCAAGG
CCGAGAATGCTGGCAAGTCGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3160552..3161974-

>ATCC64974_105850-T1 ID=ATCC64974_105850-T1|Name=ATCC64974_105850-T1|organism=Aspergillus niger N402|type=CDS|length=5895bp|location=Sequence derived from alignment at OGUI01000017.1:3160552..3161974- (Aspergillus niger N402)
CTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAATCCCGATCTTTTCAAA
ACCTCTTCATCTTCCCCTGATCGACGCAAGGTCTCCTTCCAGGAGGGACC
ACCTACCGAGATTGACAACCTCTACGATGCCTCTGAGCCCGTCAGACGTA
CGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCAACCTCTGTCGACTGTT
GACCCTTCGCCGGTCGGGGAACATGACCCGTTCAGTCTTGGGGACAGTGA
CGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAGCAGAGCACAGCTGAGG
CTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAGCAAGGCCGAGAATGCT
GGCAAGTCGTAGATGATCTCCCTGTGATCCGTGAGAACCTTCGCAAAGGA
TTCTTGGATACCCAGACGAAGGTCAACTCGTGGGTCCAGAATCTGAAGAA
ACGCCTCGATGGCGAAACACCTGAGGCCGGACCTTCTGGTCAAGGCCAGC
CCGATGAGAACTATGGTAGACCTAGACGGAGCGGGGACCTAGGTCGTCGG
AGCGGCGATCGCGAACGCTACGATGCCGATCATCGCATCCTGAACGACGA
CTTTTCCTCACTTGAACTGAGAGATGCGGAAGGCATGACGGATCCCAGTG
CTGTCGAACAAGATGCGCCGCCCCCGAAGCCACCACGCCCAACTGCTGCG
CAGAGGCAGCTAGAAGCAGATGAGATGTATGCCCGTCAGCTGGCCGAGCA
CTACAACCGTCCTGCGCGCCAACCCCGTTGGGACAACGAGTACCCACAGC
AGCGGCCACGAAGAGGAAGCGATGGATCGGAGGAAAAAGAATACAGCTTT
TTCGATGACCCCCAATAAACTCTCCACTGGACCACTCAGTCCCAAACCCG
AGTCGCCGACTACCGCGCGCCCTCTAGATTTTGATGATGAACCTCAGGAA
ACCGGTGTCACTGCAGCACCGTCAACAGCCCCTGCTCAGCAGGGCGCTGC
GGAAGCTGCCCCGCCTAAGCCACCCCGCCCATTGAGCCCCCGGCAAGAGG
CCGAGAATACCCTCAAGGAAGCATTCCCCTCTATCGAGGCATCGGTGATC
AAAGCAGTGTTGGTGGCCAGTAACTGGGATGTGGAACGGTCATTCCATGC
TTTGCTTAATGTCGGAAGAAGACAAGACTCTCCTCCTCCGCGCCCCCCGC
GCCCTCTCGCCAATCCCGATCTTTTCAAAACCTCTTCATCTTCCCCTGAT
CGACGCAAGGTCTCCTTCCAGGAGGGACCACCTACCGAGATTGACAACCT
CTACGATGCCTCTGAGCCCGTCAGACGTACGTCTCCCGCGACAGGCAAGT
CGAGCAAGTGGCAACCTCTGTCGACTGTTGACCCTTCGCCGGTCGGGGAA
CATGACCCGTTCAGTCTTGGGGACAGTGACGATGAGAAAGAAAAGGAAGC
CAAGACTAAGGAGCAGAGCACAGCTGAGGCTGGGCCGGCCAGCGAAGCGT
CGAAAGACAGCAGCAAGGCCGAGAATGCTGGCAAGTCGTAGATGATCTCC
CTGTGATCCGTGAGAACCTTCGCAAAGGATTCTTGGATACCCAGACGAAG
GTCAACTCGTGGGTCCAGAATCTGAAGAAACGCCTCGATGGCGAAACACC
TGAGGCCGGACCTTCTGGTCAAGGCCAGCCCGATGAGAACTATGGTAGAC
CTAGACGGAGCGGGGACCTAGGTCGTCGGAGCGGCGATCGCGAACGCTAC
GATGCCGATCATCGCATCCTGAACGACGACTTTTCCTCACTTGAACTGAG
AGATGCGGAAGGCATGACGGATCCCAGTGCTGTCGAACAAGATGCGCCGC
CCCCGAAGCCACCACGCCCAACTGCTGCGCAGAGGCAGCTAGAAGCAGAT
GAGATGTATGCCCGTCAGCTGGCCGAGCACTACAACCGTCCTGCGCGCCA
ACCCCGTTGGGACAACGAGTACCCACAGCAGCGGCCACGAAGAGGAAGCG
ATGGATCGGAGGAAAAAGAATACAGCTTTTTCGATGACCCCCAATAAACT
CTCCACTGGACCACTCAGTCCCAAACCCGAGTCGCCGACTACCGCGCGCC
CTCTAGATTTTGATGATGAACCTCAGGAAACCGGTGTCACTGCAGCACCG
TCAACAGCCCCTGCTCAGCAGGGCGCTGCGGAAGCTGCCCCGCCTAAGCC
ACCCCGCCCATTGAGCCCCCGGCAAGAGGCCGAGAATACCCTCAAGGAAG
CATTCCCCTCTATCGAGGCATCGGTGATCAAAGCAGTGTTGGTGGCCAGT
AACTGGGATGTGGAACGGTCATTCCATGCTTTGCTTAATGTCGGAAGAAG
ACAAGACTCTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAATCCCGATC
TTTTCAAAACCTCTTCATCTTCCCCTGATCGACGCAAGGTCTCCTTCCAG
GAGGGACCACCTACCGAGATTGACAACCTCTACGATGCCTCTGAGCCCGT
CAGACGTACGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCAACCTCTGT
CGACTGTTGACCCTTCGCCGGTCGGGGAACATGACCCGTTCAGTCTTGGG
GACAGTGACGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAGCAGAGCAC
AGCTGAGGCTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAGCAAGGCCG
AGAATGCTGGCAAGTCGTAGATGATCTCCCTGTGATCCGTGAGAACCTTC
GCAAAGGATTCTTGGATACCCAGACGAAGGTCAACTCGTGGGTCCAGAAT
CTGAAGAAACGCCTCGATGGCGAAACACCTGAGGCCGGACCTTCTGGTCA
AGGCCAGCCCGATGAGAACTATGGTAGACCTAGACGGAGCGGGGACCTAG
GTCGTCGGAGCGGCGATCGCGAACGCTACGATGCCGATCATCGCATCCTG
AACGACGACTTTTCCTCACTTGAACTGAGAGATGCGGAAGGCATGACGGA
TCCCAGTGCTGTCGAACAAGATGCGCCGCCCCCGAAGCCACCACGCCCAA
CTGCTGCGCAGAGGCAGCTAGAAGCAGATGAGATGTATGCCCGTCAGCTG
GCCGAGCACTACAACCGTCCTGCGCGCCAACCCCGTTGGGACAACGAGTA
CCCACAGCAGCGGCCACGAAGAGGAAGCGATGGATCGGAGGAAAAAGAAT
ACAGCTTTTTCGATGACCCCCAATAAACTCTCCACTGGACCACTCAGTCC
CAAACCCGAGTCGCCGACTACCGCGCGCCCTCTAGATTTTGATGATGAAC
CTCAGGAAACCGGTGTCACTGCAGCACCGTCAACAGCCCCTGCTCAGCAG
GGCGCTGCGGAAGCTGCCCCGCCTAAGCCACCCCGCCCATTGAGCCCCCG
GCAAGAGGCCGAGAATACCCTCAAGGAAGCATTCCCCTCTATCGAGGCAT
CGGTGATCAAAGCAGTGTTGGTGGCCAGTAACTGGGATGTGGAACGGTCA
TTCCATGCTTTGCTTAATGTCGGAAGAAGACAAGACTCTCCTCCTCCGCG
CCCCCCGCGCCCTCTCGCCAATCCCGATCTTTTCAAAACCTCTTCATCTT
CCCCTGATCGACGCAAGGTCTCCTTCCAGGAGGGACCACCTACCGAGATT
GACAACCTCTACGATGCCTCTGAGCCCGTCAGACGTACGTCTCCCGCGAC
AGGCAAGTCGAGCAAGTGGCAACCTCTGTCGACTGTTGACCCTTCGCCGG
TCGGGGAACATGACCCGTTCAGTCTTGGGGACAGTGACGATGAGAAAGAA
AAGGAAGCCAAGACTAAGGAGCAGAGCACAGCTGAGGCTGGGCCGGCCAG
CGAAGCGTCGAAAGACAGCAGCAAGGCCGAGAATGCTGGCAAGTCGTAGA
TGATCTCCCTGTGATCCGTGAGAACCTTCGCAAAGGATTCTTGGATACCC
AGACGAAGGTCAACTCGTGGGTCCAGAATCTGAAGAAACGCCTCGATGGC
GAAACACCTGAGGCCGGACCTTCTGGTCAAGGCCAGCCCGATGAGAACTA
TGGTAGACCTAGACGGAGCGGGGACCTAGGTCGTCGGAGCGGCGATCGCG
AACGCTACGATGCCGATCATCGCATCCTGAACGACGACTTTTCCTCACTT
GAACTGAGAGATGCGGAAGGCATGACGGATCCCAGTGCTGTCGAACAAGA
TGCGCCGCCCCCGAAGCCACCACGCCCAACTGCTGCGCAGAGGCAGCTAG
AAGCAGATGAGATGTATGCCCGTCAGCTGGCCGAGCACTACAACCGTCCT
GCGCGCCAACCCCGTTGGGACAACGAGTACCCACAGCAGCGGCCACGAAG
AGGAAGCGATGGATCGGAGGAAAAAGAATACAGCTTTTTCGATGACCCCC
AATAAACTCTCCACTGGACCACTCAGTCCCAAACCCGAGTCGCCGACTAC
CGCGCGCCCTCTAGATTTTGATGATGAACCTCAGGAAACCGGTGTCACTG
CAGCACCGTCAACAGCCCCTGCTCAGCAGGGCGCTGCGGAAGCTGCCCCG
CCTAAGCCACCCCGCCCATTGAGCCCCCGGCAAGAGGCCGAGAATACCCT
CAAGGAAGCATTCCCCTCTATCGAGGCATCGGTGATCAAAGCAGTGTTGG
TGGCCAGTAACTGGGATGTGGAACGGTCATTCCATGCTTTGCTTAATGTC
GGAAGAAGACAAGACTCTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAA
TCCCGATCTTTTCAAAACCTCTTCATCTTCCCCTGATCGACGCAAGGTCT
CCTTCCAGGAGGGACCACCTACCGAGATTGACAACCTCTACGATGCCTCT
GAGCCCGTCAGACGTACGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCA
ACCTCTGTCGACTGTTGACCCTTCGCCGGTCGGGGAACATGACCCGTTCA
GTCTTGGGGACAGTGACGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAG
CAGAGCACAGCTGAGGCTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAG
CAAGGCCGAGAATGCTGGCAAGTCGTAGATGATCTCCCTGTGATCCGTGA
GAACCTTCGCAAAGGATTCTTGGATACCCAGACGAAGGTCAACTCGTGGG
TCCAGAATCTGAAGAAACGCCTCGATGGCGAAACACCTGAGGCCGGACCT
TCTGGTCAAGGCCAGCCCGATGAGAACTATGGTAGACCTAGACGGAGCGG
GGACCTAGGTCGTCGGAGCGGCGATCGCGAACGCTACGATGCCGATCATC
GCATCCTGAACGACGACTTTTCCTCACTTGAACTGAGAGATGCGGAAGGC
ATGACGGATCCCAGTGCTGTCGAACAAGATGCGCCGCCCCCGAAGCCACC
ACGCCCAACTGCTGCGCAGAGGCAGCTAGAAGCAGATGAGATGTATGCCC
GTCAGCTGGCCGAGCACTACAACCGTCCTGCGCGCCAACCCCGTTGGGAC
AACGAGTACCCACAGCAGCGGCCACGAAGAGGAAGCGATGGATCGGAGGA
AAAAGAATACAGCTTTTTCGATGACCCCCAATAAACTCTCCACTGGACCA
CTCAGTCCCAAACCCGAGTCGCCGACTACCGCGCGCCCTCTAGATTTTGA
TGATGAACCTCAGGAAACCGGTGTCACTGCAGCACCGTCAACAGCCCCTG
CTCAGCAGGGCGCTGCGGAAGCTGCCCCGCCTAAGCCACCCCGCCCATTG
AGCCCCCGGCAAGAGGCCGAGAATACCCTCAAGGAAGCATTCCCCTCTAT
CGAGGCATCGGTGATCAAAGCAGTGTTGGTGGCCAGTAACTGGGATGTGG
AACGGTCATTCCATGCTTTGCTTAATGTCGGAAGAAGACAAGACT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105850ATCC64974_105850Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105850-T1ATCC64974_105850-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105850-T1.cdsATCC64974_105850-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105850-T1.exon5ATCC64974_105850-T1.exon5Aspergillus niger N402exon
ATCC64974_105850-T1.exon4ATCC64974_105850-T1.exon4Aspergillus niger N402exon
ATCC64974_105850-T1.exon3ATCC64974_105850-T1.exon3Aspergillus niger N402exon
ATCC64974_105850-T1.exon2ATCC64974_105850-T1.exon2Aspergillus niger N402exon
ATCC64974_105850-T1.exon1ATCC64974_105850-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR041807
DBxrefInterPro:IPR003892
DBxrefPFAM:PF02845
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3160552..3161974 -
Powered by Drupal