You are here

Home

ATCC64974_105880-T1, ATCC64974_105880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105880-T1
Unique NameATCC64974_105880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3166233..3167059-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105880-T1 ID=ATCC64974_105880-T1|Name=ATCC64974_105880-T1|organism=Aspergillus niger N402|type=mRNA|length=827bp|location=Sequence derived from alignment at OGUI01000017.1:3166233..3167059- (Aspergillus niger N402)
ATGGGAAACACAAATAGCACCCACAAGATCTCTGCTCAGGACCGGTGAGC
CTATCCATATCATTCCAATGTGTTTCGCCCTGTTGCTGTCTCCATCAGGG
CCGTTTGGCACGGGTCACGAGCCCCATCCCCCCGTCTCCGACCGATAAAC
TAACGCTCGTAACGCTCAGGGCAATCCTCGACCTCAAGAACCAGCGAGAC
AAACTTCACCAGTATCAGAAGCGGATTACTGTCTTGACAGACCGCGAAAC
TGAAATTGCGAAACAATGTCTCGCCCGGGATGACCGCAAGCGCGCCCTGC
TTGCCCTGCGTCGCAAGAAGTACCAGGAGTCGCTGCTCGACAAGACCGAC
AAACAACTCGAGCAGCTCGAACAGCTTACGGGTCAGATTGAGTTTGCACT
GGTTCAGAAGGATGTTCTGTTCGGCTTGCAGCAAGGGACCAAGGTTCTGC
AGACCATTAACAAGGAAATGGGTGGTCTTGAGGGGGTCGAGAAGCTGATG
GGCGAGACGGAGGAAGCGAGAGCTTATCAAGAGGTAAGAGCTTATTGTCA
ATGGTTATCTGAGAAGGGTATTCTGGATTGGATGCTGACGAGTCGGTGGT
GGTTTGTACAGGAAATCAGCGAGATGCTTGCTGGACGCTTGTCCACTCAG
GATGAGGATGAGGTCGAAGAGGAACTCGAGGCTTTGCAGCGGGATACGCA
GGGTCCGGTTGTCCTGCCAAATGCGCCCAGCTCTACACTCCCAGAGCATG
TGGGGGGAGTCAAGGAGGACGAGCATGCGGTGGAAGAAGAGGCCCACGTC
GAGGAGCGGACGGCGATTCCTGCTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3166233..3167059-

>ATCC64974_105880-T1 ID=ATCC64974_105880-T1|Name=ATCC64974_105880-T1|organism=Aspergillus niger N402|type=CDS|length=1872bp|location=Sequence derived from alignment at OGUI01000017.1:3166233..3167059- (Aspergillus niger N402)
GAAATCAGCGAGATGCTTGCTGGACGCTTGTCCACTCAGGATGAGGATGA
GGTCGAAGAGGAACTCGAGGCTTTGCAGCGGGATACGCAGGGTCCGGTTG
TCCTGCCAAATGCGCCCAGCTCTACACTCCCAGAGCATGTGGGGGGAGTC
AAGGAGGACGAGCATGCGGTGGAAGAAGAGGCCCACGTCGAGGAGCGGAC
GGCGATTCCTGCTTGAGGCAATCCTCGACCTCAAGAACCAGCGAGACAAA
CTTCACCAGTATCAGAAGCGGATTACTGTCTTGACAGACCGCGAAACTGA
AATTGCGAAACAATGTCTCGCCCGGGATGACCGCAAGCGCGCCCTGCTTG
CCCTGCGTCGCAAGAAGTACCAGGAGTCGCTGCTCGACAAGACCGACAAA
CAACTCGAGCAGCTCGAACAGCTTACGGGTCAGATTGAGTTTGCACTGGT
TCAGAAGGATGTTCTGTTCGGCTTGCAGCAAGGGACCAAGGTTCTGCAGA
CCATTAACAAGGAAATGGGTGGTCTTGAGGGGGTCGAGAAGCTGATGGGC
GAGACGGAGGAAGCGAGAGCTTATCAAGAGATGGGAAACACAAATAGCAC
CCACAAGATCTCTGCTCAGGACCGGAAATCAGCGAGATGCTTGCTGGACG
CTTGTCCACTCAGGATGAGGATGAGGTCGAAGAGGAACTCGAGGCTTTGC
AGCGGGATACGCAGGGTCCGGTTGTCCTGCCAAATGCGCCCAGCTCTACA
CTCCCAGAGCATGTGGGGGGAGTCAAGGAGGACGAGCATGCGGTGGAAGA
AGAGGCCCACGTCGAGGAGCGGACGGCGATTCCTGCTTGAGGCAATCCTC
GACCTCAAGAACCAGCGAGACAAACTTCACCAGTATCAGAAGCGGATTAC
TGTCTTGACAGACCGCGAAACTGAAATTGCGAAACAATGTCTCGCCCGGG
ATGACCGCAAGCGCGCCCTGCTTGCCCTGCGTCGCAAGAAGTACCAGGAG
TCGCTGCTCGACAAGACCGACAAACAACTCGAGCAGCTCGAACAGCTTAC
GGGTCAGATTGAGTTTGCACTGGTTCAGAAGGATGTTCTGTTCGGCTTGC
AGCAAGGGACCAAGGTTCTGCAGACCATTAACAAGGAAATGGGTGGTCTT
GAGGGGGTCGAGAAGCTGATGGGCGAGACGGAGGAAGCGAGAGCTTATCA
AGAGATGGGAAACACAAATAGCACCCACAAGATCTCTGCTCAGGACCGGA
AATCAGCGAGATGCTTGCTGGACGCTTGTCCACTCAGGATGAGGATGAGG
TCGAAGAGGAACTCGAGGCTTTGCAGCGGGATACGCAGGGTCCGGTTGTC
CTGCCAAATGCGCCCAGCTCTACACTCCCAGAGCATGTGGGGGGAGTCAA
GGAGGACGAGCATGCGGTGGAAGAAGAGGCCCACGTCGAGGAGCGGACGG
CGATTCCTGCTTGAGGCAATCCTCGACCTCAAGAACCAGCGAGACAAACT
TCACCAGTATCAGAAGCGGATTACTGTCTTGACAGACCGCGAAACTGAAA
TTGCGAAACAATGTCTCGCCCGGGATGACCGCAAGCGCGCCCTGCTTGCC
CTGCGTCGCAAGAAGTACCAGGAGTCGCTGCTCGACAAGACCGACAAACA
ACTCGAGCAGCTCGAACAGCTTACGGGTCAGATTGAGTTTGCACTGGTTC
AGAAGGATGTTCTGTTCGGCTTGCAGCAAGGGACCAAGGTTCTGCAGACC
ATTAACAAGGAAATGGGTGGTCTTGAGGGGGTCGAGAAGCTGATGGGCGA
GACGGAGGAAGCGAGAGCTTATCAAGAGATGGGAAACACAAATAGCACCC
ACAAGATCTCTGCTCAGGACCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105880ATCC64974_105880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105880-T1ATCC64974_105880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105880-T1.cdsATCC64974_105880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105880-T1.exon3ATCC64974_105880-T1.exon3Aspergillus niger N402exon
ATCC64974_105880-T1.exon2ATCC64974_105880-T1.exon2Aspergillus niger N402exon
ATCC64974_105880-T1.exon1ATCC64974_105880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264IIZ
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3166233..3167059 -
Powered by Drupal