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ATCC64974_106000-T1, ATCC64974_106000-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106000-T1
Unique NameATCC64974_106000-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3195678..3196953-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106000-T1 ID=ATCC64974_106000-T1|Name=ATCC64974_106000-T1|organism=Aspergillus niger N402|type=mRNA|length=1276bp|location=Sequence derived from alignment at OGUI01000017.1:3195678..3196953- (Aspergillus niger N402)
ATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATGGTGA
GCATTCGATTATTCCCCGATCTTTGTCGCTCTGTTCGCTGGGTGGACGCG
GAGGAGGATCTGGCCGGAGGGACAGGCATGGCATCGAGGATTCTGGGGGA
CTTTTAGGAGGCTGAGGATAGCGCTGCGCCAGCTACAACCGGCAATCGCT
AGGGGGAGAGAATAAAAGAAGAGAGATGCTACACTGAATGCCTGTCCCTG
CGATCTATTCTTGCGATTCAATTTTGCGTGATATGATGGAAAAGGACATG
GGACTGATTCGAATTTCCTCCTACAGTGAAGGTTCACATTCGCTCGCGCA
TTGTGACCGTTGAGGGACCCCGAGGTATGCAAATTTTCCAACAATCCACC
ACGACCCGGCCATTTGGAACAATATCGACCAATATGTTCCTCGTGGCGTG
TTGTGACCTACGGCTCGAGCTATGTGCCGCACCCGTCTGTATTCAGCGAC
ACTAACATGGGTCCTTTTCCCTCCTCTTACAGGCAAGCTCGTCAAGGACC
TCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCC
ATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGT
CCGCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGT
ACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAG
AAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGGTATGCCGAAAT
CAATTCACTCGCACACGCATCGAAGACTGGGGGATGAGCCGGGATCAAAC
CAAAGGATTATTCTCTTTCCTTTTCCCGGTTGGGTTCTGGCTTCTACCTA
CCAGTGCTTGGTCAATTATCATGTTACTGGGAGGAGACATTTTGCTGATG
GGTATTGCGTTCTACAGAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGT
GACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATG
AGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCC
GACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGGTAAG
AAAAATGCCGCCTCCCTTTGGTTTCTCGTGAGAGAAAATATCGAGACCGT
CACTGACATGAATGATTTTGCACAGTTCCTTGACGGTCTGTACGTGTCGG
AGCGTGGTAACATTGTCGAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3195678..3196953-

>ATCC64974_106000-T1 ID=ATCC64974_106000-T1|Name=ATCC64974_106000-T1|organism=Aspergillus niger N402|type=CDS|length=2895bp|location=Sequence derived from alignment at OGUI01000017.1:3195678..3196953- (Aspergillus niger N402)
TTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTA
AAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGC
GTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGG
TAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCT
GCCGTGTCCGCAACAAGGATATCCGTAAGGCAAGCTCGTCAAGGACCTCT
CCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCATT
GAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCCG
CACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTACA
AGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGAAG
AACCCCGAGACCGGTCTGCACGACGTTGAGATCAGTGAAGGTTCACATTC
GCTCGCGCATTGTGACCGTTGAGGGACCCCGAGATGCGGTACATTTACTC
CGAGGAACGGCTGCCCATCCCCGAGAATGTTCCTTGACGGTCTGTACGTG
TCGGAGCGTGGTAACATTGTCGAGGAGTAAAAACTTCTTGGGTGAGAAGT
ACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCC
AACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTC
CCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATA
TCCGTAAGGCAAGCTCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCG
GCCGCCCCGAGAAGAATGTCATCTCCATTGAGATGCACCACGGTGTCCGC
AAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAACAACCTGAT
CATCGGTGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTC
ACTTTCCCATCAACGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCAC
GACGTTGAGATCAGTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTG
AGGGACCCCGAGATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCC
CGAGAATGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTC
GAGGAGTAAAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCC
AGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTC
CTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCA
GCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGGCAAGCTCGTCAA
GGACCTCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCA
TCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGT
ACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTT
CAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACA
TTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGTGAAGGT
TCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGATGCGGTAC
ATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATGTTCCTTGACGGTC
TGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAAAAACTTCTTGGG
TGAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCA
CCTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAG
GGTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAA
CAAGGATATCCGTAAGGCAAGCTCGTCAAGGACCTCTCCCACATTGCTGT
CACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCATTGAGATGCACCACG
GTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAAC
AACCTGATCATCGGTGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGT
CTACGCTCACTTTCCCATCAACGTCAACATTGAGAAGAACCCCGAGACCG
GTCTGCACGACGTTGAGATCAGTGAAGGTTCACATTCGCTCGCGCATTGT
GACCGTTGAGGGACCCCGAGATGCGGTACATTTACTCCGAGGAACGGCTG
CCCATCCCCGAGAATGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTA
ACATTGTCGAGGAGTAAAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGT
GACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATG
AGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCC
GACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGGCAAG
CTCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAA
GAATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTT
CCCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACC
AAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAA
CGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCA
GTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGA
TGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL9BATCC64974_106000Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106000-T1ATCC64974_106000-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106000-T1.cdsATCC64974_106000-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106000-T1.exon5ATCC64974_106000-T1.exon5Aspergillus niger N402exon
ATCC64974_106000-T1.exon4ATCC64974_106000-T1.exon4Aspergillus niger N402exon
ATCC64974_106000-T1.exon3ATCC64974_106000-T1.exon3Aspergillus niger N402exon
ATCC64974_106000-T1.exon2ATCC64974_106000-T1.exon2Aspergillus niger N402exon
ATCC64974_106000-T1.exon1ATCC64974_106000-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR002359
DBxrefInterPro:IPR000702
DBxrefInterPro:IPR036789
DBxrefInterPro:IPR020040
DBxrefPFAM:PF00347
Product60S ribosomal protein L9B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3195678..3196953 -
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