You are here

Home

ATCC64974_106050-T1, ATCC64974_106050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106050-T1
Unique NameATCC64974_106050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3212320..3213412-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106050-T1 ID=ATCC64974_106050-T1|Name=ATCC64974_106050-T1|organism=Aspergillus niger N402|type=mRNA|length=1093bp|location=Sequence derived from alignment at OGUI01000017.1:3212320..3213412- (Aspergillus niger N402)
ATGGCTTCCCTGTCCGACTTTGTCGACTTCTCCCAGCCGTCCCTCCAATG
TACGTGGAGCTTTCCCCGGCTATCCCCTCTCTTCCCTCCCCGCATGTGAT
TGTAACTCTCTCTCTCACACACTCTCTCTCAACAGGGGCCGCGCTGTCAA
TCGCCTTTAACCCTATCTTCTGGAAGTAAGTATTCTAATATATTCCACTC
TTTTCACCGCTAAGCATTAATCTATCCAGCATTGTCGCCCGTGCTGGTTG
GTCCCAAACCCCCACTCCAACATCTCTCCCTCCCCCCCAATTCTACGAGG
AATCCAGCTCTGGCAGCTTCTGCCTTGGCTCTCTACCTATTCCCACCACC
TCTTCTTCCTCCATTTCAGTATAAGAGGCTTATGACAAATTTCCTCGGTC
ATATCATTCTGTAGAGTATCGGAGTCACTTCTTGACTCGTATATTCGGTA
ACGCCTACTACGGCTGCTACTTCCTCGCTGTCACCATCTTCAGTCTGGGA
ATTTTGCGAGACCATGTCTACCAAGTGGCCCTGGAAGACCAACCTTATTA
TGCCCCTGTGCACCAACCCGTCCTCGGCGGCCTTCTCTTCGCCTTCGGCT
CCGTCCTCGTCCTGTCCAGCATGTATGCCCTCGGTGTCACCGGCACTTAC
CTTGGCGACTACTTCGGTATCCTGATGGATGCGCCTGTCACCGGCTTCCC
CTTCAACGTTACTGGTTCCCCCATGTACTGGGGCAGTACTCTGAACTTCT
TGGGCGTTGCTCTCTACAAGGGCAAGGTGGCGGGTGTCTTCCTGACGGCC
GAGGTCTTCATCCTGTACTGGTTCGCTCTCCAGTGGGAGGAGTAAGTATC
CCATCTATCTTTCTTATATGGCCCACTATGCACCATGGACTTGCCTTTAC
TCGTCTTTTTTGCAACCAAAGCCCATATGCACATGTGTCTCGAGCCCCAA
CGCAAAATGAGAATTCATCCCCCCCATGCACGGAAATGGTAGAAACCCAC
TGACCCGGGCCTGGTAGTCCCTTTACGGCGGAAATCTACGCCAAGCGGGA
ACGCGAGCGCGCCAAATCCAAGAGCGGCGGCAAGAGCTTGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3212320..3213412-

>ATCC64974_106050-T1 ID=ATCC64974_106050-T1|Name=ATCC64974_106050-T1|organism=Aspergillus niger N402|type=CDS|length=3045bp|location=Sequence derived from alignment at OGUI01000017.1:3212320..3213412- (Aspergillus niger N402)
TCCCTTTACGGCGGAAATCTACGCCAAGCGGGAACGCGAGCGCGCCAAAT
CCAAGAGCGGCGGCAAGAGCTTGTAAAGTATCGGAGTCACTTCTTGACTC
GTATATTCGGTAACGCCTACTACGGCTGCTACTTCCTCGCTGTCACCATC
TTCAGTCTGGGAATTTTGCGAGACCATGTCTACCAAGTGGCCCTGGAAGA
CCAACCTTATTATGCCCCTGTGCACCAACCCGTCCTCGGCGGCCTTCTCT
TCGCCTTCGGCTCCGTCCTCGTCCTGTCCAGCATGTATGCCCTCGGTGTC
ACCGGCACTTACCTTGGCGACTACTTCGGTATCCTGATGGATGCGCCTGT
CACCGGCTTCCCCTTCAACGTTACTGGTTCCCCCATGTACTGGGGCAGTA
CTCTGAACTTCTTGGGCGTTGCTCTCTACAAGGGCAAGGTGGCGGGTGTC
TTCCTGACGGCCGAGGTCTTCATCCTGTACTGGTTCGCTCTCCAGTGGGA
GGACATTGTCGCCCGTGCTGGGGCCGCGCTGTCAATCGCCTTTAACCCTA
TCTTCTGGAAATGGCTTCCCTGTCCGACTTTGTCGACTTCTCCCAGCCGT
CCCTCCAATTCCCTTTACGGCGGAAATCTACGCCAAGCGGGAACGCGAGC
GCGCCAAATCCAAGAGCGGCGGCAAGAGCTTGTAAAGTATCGGAGTCACT
TCTTGACTCGTATATTCGGTAACGCCTACTACGGCTGCTACTTCCTCGCT
GTCACCATCTTCAGTCTGGGAATTTTGCGAGACCATGTCTACCAAGTGGC
CCTGGAAGACCAACCTTATTATGCCCCTGTGCACCAACCCGTCCTCGGCG
GCCTTCTCTTCGCCTTCGGCTCCGTCCTCGTCCTGTCCAGCATGTATGCC
CTCGGTGTCACCGGCACTTACCTTGGCGACTACTTCGGTATCCTGATGGA
TGCGCCTGTCACCGGCTTCCCCTTCAACGTTACTGGTTCCCCCATGTACT
GGGGCAGTACTCTGAACTTCTTGGGCGTTGCTCTCTACAAGGGCAAGGTG
GCGGGTGTCTTCCTGACGGCCGAGGTCTTCATCCTGTACTGGTTCGCTCT
CCAGTGGGAGGACATTGTCGCCCGTGCTGGGGCCGCGCTGTCAATCGCCT
TTAACCCTATCTTCTGGAAATGGCTTCCCTGTCCGACTTTGTCGACTTCT
CCCAGCCGTCCCTCCAATTCCCTTTACGGCGGAAATCTACGCCAAGCGGG
AACGCGAGCGCGCCAAATCCAAGAGCGGCGGCAAGAGCTTGTAAAGTATC
GGAGTCACTTCTTGACTCGTATATTCGGTAACGCCTACTACGGCTGCTAC
TTCCTCGCTGTCACCATCTTCAGTCTGGGAATTTTGCGAGACCATGTCTA
CCAAGTGGCCCTGGAAGACCAACCTTATTATGCCCCTGTGCACCAACCCG
TCCTCGGCGGCCTTCTCTTCGCCTTCGGCTCCGTCCTCGTCCTGTCCAGC
ATGTATGCCCTCGGTGTCACCGGCACTTACCTTGGCGACTACTTCGGTAT
CCTGATGGATGCGCCTGTCACCGGCTTCCCCTTCAACGTTACTGGTTCCC
CCATGTACTGGGGCAGTACTCTGAACTTCTTGGGCGTTGCTCTCTACAAG
GGCAAGGTGGCGGGTGTCTTCCTGACGGCCGAGGTCTTCATCCTGTACTG
GTTCGCTCTCCAGTGGGAGGACATTGTCGCCCGTGCTGGGGCCGCGCTGT
CAATCGCCTTTAACCCTATCTTCTGGAAATGGCTTCCCTGTCCGACTTTG
TCGACTTCTCCCAGCCGTCCCTCCAATTCCCTTTACGGCGGAAATCTACG
CCAAGCGGGAACGCGAGCGCGCCAAATCCAAGAGCGGCGGCAAGAGCTTG
TAAAGTATCGGAGTCACTTCTTGACTCGTATATTCGGTAACGCCTACTAC
GGCTGCTACTTCCTCGCTGTCACCATCTTCAGTCTGGGAATTTTGCGAGA
CCATGTCTACCAAGTGGCCCTGGAAGACCAACCTTATTATGCCCCTGTGC
ACCAACCCGTCCTCGGCGGCCTTCTCTTCGCCTTCGGCTCCGTCCTCGTC
CTGTCCAGCATGTATGCCCTCGGTGTCACCGGCACTTACCTTGGCGACTA
CTTCGGTATCCTGATGGATGCGCCTGTCACCGGCTTCCCCTTCAACGTTA
CTGGTTCCCCCATGTACTGGGGCAGTACTCTGAACTTCTTGGGCGTTGCT
CTCTACAAGGGCAAGGTGGCGGGTGTCTTCCTGACGGCCGAGGTCTTCAT
CCTGTACTGGTTCGCTCTCCAGTGGGAGGACATTGTCGCCCGTGCTGGGG
CCGCGCTGTCAATCGCCTTTAACCCTATCTTCTGGAAATGGCTTCCCTGT
CCGACTTTGTCGACTTCTCCCAGCCGTCCCTCCAATTCCCTTTACGGCGG
AAATCTACGCCAAGCGGGAACGCGAGCGCGCCAAATCCAAGAGCGGCGGC
AAGAGCTTGTAAAGTATCGGAGTCACTTCTTGACTCGTATATTCGGTAAC
GCCTACTACGGCTGCTACTTCCTCGCTGTCACCATCTTCAGTCTGGGAAT
TTTGCGAGACCATGTCTACCAAGTGGCCCTGGAAGACCAACCTTATTATG
CCCCTGTGCACCAACCCGTCCTCGGCGGCCTTCTCTTCGCCTTCGGCTCC
GTCCTCGTCCTGTCCAGCATGTATGCCCTCGGTGTCACCGGCACTTACCT
TGGCGACTACTTCGGTATCCTGATGGATGCGCCTGTCACCGGCTTCCCCT
TCAACGTTACTGGTTCCCCCATGTACTGGGGCAGTACTCTGAACTTCTTG
GGCGTTGCTCTCTACAAGGGCAAGGTGGCGGGTGTCTTCCTGACGGCCGA
GGTCTTCATCCTGTACTGGTTCGCTCTCCAGTGGGAGGACATTGTCGCCC
GTGCTGGGGCCGCGCTGTCAATCGCCTTTAACCCTATCTTCTGGAAATGG
CTTCCCTGTCCGACTTTGTCGACTTCTCCCAGCCGTCCCTCCAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006656phosphatidylcholine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106050ATCC64974_106050Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106050-T1ATCC64974_106050-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106050-T1.cdsATCC64974_106050-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106050-T1.exon5ATCC64974_106050-T1.exon5Aspergillus niger N402exon
ATCC64974_106050-T1.exon4ATCC64974_106050-T1.exon4Aspergillus niger N402exon
ATCC64974_106050-T1.exon3ATCC64974_106050-T1.exon3Aspergillus niger N402exon
ATCC64974_106050-T1.exon2ATCC64974_106050-T1.exon2Aspergillus niger N402exon
ATCC64974_106050-T1.exon1ATCC64974_106050-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926425H
DBxrefInterPro:IPR024960
DBxrefInterPro:IPR007318
DBxrefPFAM:PF04191
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3212320..3213412 -
Powered by Drupal