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ATCC64974_106080-T1, ATCC64974_106080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106080-T1
Unique NameATCC64974_106080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3222317..3223464+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106080-T1 ID=ATCC64974_106080-T1|Name=ATCC64974_106080-T1|organism=Aspergillus niger N402|type=mRNA|length=1148bp|location=Sequence derived from alignment at OGUI01000017.1:3222317..3223464+ (Aspergillus niger N402)
ATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGAC
CAACACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCG
AGGACAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCT
GTAGCCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGG
CCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCT
GTTGCTGGTCGCCGGTGAGCTCGCCCTCATTTCCTTGTCGCAGTATCTAC
AGTTAACTGATATGGACTCTGCTGCTACCTAGGATGGTACGAAAGTGGTC
GGAGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGC
GACCACTCAAGTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGA
TCCCAAACCCGGCTGGAGGGAGCCCGCTACTCGTAACCGGTTCTTGGGAC
AAGACCATCAAGTACTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGT
GGAGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCG
TGGTCGGCACCGCAGACCGCTATATCAACGTCATCAACCTCGACCAACCC
ACCAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGT
AGTCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGG
GCCGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTC
AGTTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTA
CTCCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCG
CCGGCAGTGACGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGT
CTAAAGGGATATCCCTCCGTGGGCGGTACCATCTCCAGCACTGCCTTCAA
CCGCAACGGCAACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGG
GGTACTCCGCCAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCT
GTCAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCGGAAGAGGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3222317..3223464+

>ATCC64974_106080-T1 ID=ATCC64974_106080-T1|Name=ATCC64974_106080-T1|organism=Aspergillus niger N402|type=CDS|length=2160bp|location=Sequence derived from alignment at OGUI01000017.1:3222317..3223464+ (Aspergillus niger N402)
ATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGAC
CAACACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCG
AGGACAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCT
GTAGCCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGG
CCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCT
GTTGCTGGTCGCCGGATGGTACGAAAGTGGTCGGAGCTGGCGCCGACAAA
GCCGCTCGGATGCTCGACCTTGCAACCAATGCGACCACTCAAGTCGCCGC
TCACGATGCGCCCATCAAATGCTGCCACATGATCCCAAACCCGGCTGGAG
GGAGCCCGCTACTCGTAACCGGTTCTTGGGACAAGACCATCAAGTACTGG
GACTTGCGACAGTCAAACCCCATCGCCTCGGTGGAGTGCCAGGAGCGTGT
TTACACCATGGATGTCAAGGACAAACTCCTCGTGGTCGGCACCGCAGACC
GCTATATCAACGTCATCAACCTCGACCAACCCACCAAATTCTACAAAACC
ATGCAGTCCCCTCTCAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCGAC
TGCCACCGGGTTCGCCGTCGGCAGTGTCGAGGGCCGCTGTGCGATCCAGT
ATGTCGAGGACAAGGACTCCTCCAACAACTTCAGTTTCAAGTGCCACCGT
GAGACTCCTCAGCGCGATGTCAACAACATCTACTCCGTCAACGCCATCTC
CTTCCACCCTGTCCACGGCACCTTCAGCACCGCCGGCAGTGACGGCACCT
TCCACTTCTGGGACAAGGACGCCAAGCATCGTCTAAAGGGATATCCCTCC
GTGGGCGGTACCATCTCCAGCACTGCCTTCAACCGCAACGGCAACATCTT
CGCCTACGCTGTCAGTTACGACTGGAGCAAGGGGTACTCCGCCAACACCC
AGCAACTGCCCAACAAGGTTATGCTGCACCCTGTCAGCCAAGAGGAAGTG
AAGCCTAGACCAAACAACCGGAAGAGGTAAATGTCGCTTTTCGGTTCCGT
CGGCGCCGCGACGACCTCAGCTGGTCAGACCAACACCACAGGTGATATCT
CCAAGGATGTCGCCCTGAACCAACCTCCCGAGGACAGTATTTCGGACCTC
CGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAGCCTCATGGGACAAGAA
GGTTCGCATTTACGAGATCAATGAGCAGGGCCAGAGCGAAGGTAAAGCTC
TGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTGCTGGTCGCCGGATGGT
ACGAAAGTGGTCGGAGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCT
TGCAACCAATGCGACCACTCAAGTCGCCGCTCACGATGCGCCCATCAAAT
GCTGCCACATGATCCCAAACCCGGCTGGAGGGAGCCCGCTACTCGTAACC
GGTTCTTGGGACAAGACCATCAAGTACTGGGACTTGCGACAGTCAAACCC
CATCGCCTCGGTGGAGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGG
ACAAACTCCTCGTGGTCGGCACCGCAGACCGCTATATCAACGTCATCAAC
CTCGACCAACCCACCAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTG
GCAGACGCGGGTAGTCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCG
GCAGTGTCGAGGGCCGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCC
TCCAACAACTTCAGTTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGT
CAACAACATCTACTCCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCA
CCTTCAGCACCGCCGGCAGTGACGGCACCTTCCACTTCTGGGACAAGGAC
GCCAAGCATCGTCTAAAGGGATATCCCTCCGTGGGCGGTACCATCTCCAG
CACTGCCTTCAACCGCAACGGCAACATCTTCGCCTACGCTGTCAGTTACG
ACTGGAGCAAGGGGTACTCCGCCAACACCCAGCAACTGCCCAACAAGGTT
ATGCTGCACCCTGTCAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCG
GAAGAGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GLE2ATCC64974_106080Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106080-T1.exon1ATCC64974_106080-T1.exon1Aspergillus niger N402exon
ATCC64974_106080-T1.exon2ATCC64974_106080-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106080-T1.cdsATCC64974_106080-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106080-T1ATCC64974_106080-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductRNA export factor gle2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3222317..3223464 +
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