You are here

Home

ATCC64974_106090-T1, ATCC64974_106090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106090-T1
Unique NameATCC64974_106090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3224322..3226420-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106090-T1 ID=ATCC64974_106090-T1|Name=ATCC64974_106090-T1|organism=Aspergillus niger N402|type=mRNA|length=2099bp|location=Sequence derived from alignment at OGUI01000017.1:3224322..3226420- (Aspergillus niger N402)
ATGGCTTCAGACTCCAAGATCTTGCCCAAGAAGGGCCAGCGCAATATCCT
GGTCACCAGTGCTTTGCCCTACGTTAACAATGTGCCTCACTTGGGTAACA
TTGTTGGTTCCGTTCTCAGTGCTGATGTCTTCGCCAGGTACTATCTATCC
TGCTTTCCAACACCCCCCCCCCACCACCATTGCTTCCTTTGTCTAGCCCC
TGTCGCGCGCTCTCCCACTAATGTCATTCCTACATTGCTAACACCCTGTT
CTTCAGATTCCACAAGGCTTGCGGACATCAAACACTGTACATCTGTGGTA
CCGATGAATATGGAACGGCAACGGAGACCAAGGCTTTGGAGGAGAAGGTG
ACCCCGGAGGAGCTGTGCGCCAAGTACAACAAGATCCACCAGCAGGTGTA
CGAATGGTTTGAAATTGGCTTCGATCACTTCGGACGCACCCCGACCCAGC
AACACACCGAGATTTCCCAGGCCATCTTCAAGAAGCTGTATGAGAACGGC
TATCTGACGGAGAAGACGGCGGAGCAGCCGTTCTGTGAGACACATGGCTC
TTTCTTGGCGGATCGTTACGTGGAAGGTGAATGCCCTCGGTGTCACTACG
ACGATGCTCGTGGAGACCAGTGCGATAAGTGCGGTCACCTCTTGGATCCC
TTCGACCTTATCAACCCCCGCTGCAAGCTTGATGGCGCCACCCCCGTCCG
CCGCTCGACGAAACACATCCACCTTCTCCTCGACAAGCTCCAGCCTCAGA
TCGAAGAATGGTCTAAGAATGCCATCGAAAAGGGCGACTGGCCTAAGAAC
TCGCGTGTCATTACCGAGTCTTGGTTGAAGGAAGGTCTGAAGGACCGCGG
TATCACCAGAGACCTGAAGTGGGGTGTCCCGGTGCCTCTGGAGGGCTTCG
AGACCAAGGTGCTTTATGTCTGGTTTGAGGCTTGCATTGGTTACCCCTCC
ATCACGGCCAACTATACCTCGGACTGGGAGCTCTGGTGGCGGAACCCGGA
GGATGTTCAGCTGTATCAGTTCCTGGGCAAGGATAACGTTCCCTTCCACA
GTGTTATCTTCCCTGGTTCTCAGCTAGGAACCAAGGAGAAGTGGACTATG
CTTCACCACCTGAGCACCACGGAATACTTGAATTACGAAGGTGGCAAGTT
CAGCAAGTCTAGAGGCATTGGTGTCTTTGGTACCAGCGCCAAGGAGACGG
GTGTGCCCCCGGATGTGTGGCGCTACTACCTCCTGAAGAACCGTCCCGAG
ACTGGTGATACCCAGTTCGAATGGCGCTCCTTCGTTGAGAGCAACAACAG
CGAGCTGCTGGCTAAGCTGGGCAACCTTGTCAACCGTGTCATCAAGCTTG
TTACGGCATCCTACGGCTCGGTCGTTCCCGAGTTCACTGTCCCCGAGAGT
TTCCAGCCTACCTTGGATGAAGTCACGGCTACTCTCAGACAGTACATTGA
AGAGATGGAGGGTGCACACCTCCGCGCTGGTGTGGTGAGTGCGATGAAGC
TGGCCGAAGCCGGCAACGGACTGATCCAGGCCAACCGCCTTGATAACTCG
TTGATTGCCAACGAGCCCGAGCGTGCTGCCGCGGTTGTCGGTACTGTGCT
CAACCTGATTCATCTCCTGGCCAGTGTTTTCTCTCCCTACCTCCCCGCCA
CCTCCAAGTCGATCAACGAGCAGCTCGACGTGCCGTTCGGCCTGATCCCC
TCTCTGGAGGACATCAAGGACGGCTGGAAGCCGACTGCCATCAAGCCGGG
TCACAAGATCGGCAAGGCCAAGTACCTCTTCTCTCGTATCGACCCCAAGA
AGGCCGACGAGTGGCGCGAGATGTTCGGTGGTTCCCAGGCCGACCGCCAG
AAGAAGGAAGAGGAGGCGGCTAAGGCAGCGGCCAAGAAGGCCGCAAAGGA
TGCCGCTAAGGCCAAGAAGAAGGAGAAGAAGGCCAAGGCTGCTGAGGCCG
CTGCCGCTGGTGCTGATGCTGGCAGCAATGTTGAAGCCTCCGCCAAGGGA
GGCGCCCAGGCTGTGGAGGTCACCACCGATAGCAAGAACGACGAGGCCGT
TGAGAAGGTCGCCGATGGCGTGGCCCAGGTCACCATTCCCTCCTCCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3224322..3226420-

>ATCC64974_106090-T1 ID=ATCC64974_106090-T1|Name=ATCC64974_106090-T1|organism=Aspergillus niger N402|type=CDS|length=3960bp|location=Sequence derived from alignment at OGUI01000017.1:3224322..3226420- (Aspergillus niger N402)
ATTCCACAAGGCTTGCGGACATCAAACACTGTACATCTGTGGTACCGATG
AATATGGAACGGCAACGGAGACCAAGGCTTTGGAGGAGAAGGTGACCCCG
GAGGAGCTGTGCGCCAAGTACAACAAGATCCACCAGCAGGTGTACGAATG
GTTTGAAATTGGCTTCGATCACTTCGGACGCACCCCGACCCAGCAACACA
CCGAGATTTCCCAGGCCATCTTCAAGAAGCTGTATGAGAACGGCTATCTG
ACGGAGAAGACGGCGGAGCAGCCGTTCTGTGAGACACATGGCTCTTTCTT
GGCGGATCGTTACGTGGAAGGTGAATGCCCTCGGTGTCACTACGACGATG
CTCGTGGAGACCAGTGCGATAAGTGCGGTCACCTCTTGGATCCCTTCGAC
CTTATCAACCCCCGCTGCAAGCTTGATGGCGCCACCCCCGTCCGCCGCTC
GACGAAACACATCCACCTTCTCCTCGACAAGCTCCAGCCTCAGATCGAAG
AATGGTCTAAGAATGCCATCGAAAAGGGCGACTGGCCTAAGAACTCGCGT
GTCATTACCGAGTCTTGGTTGAAGGAAGGTCTGAAGGACCGCGGTATCAC
CAGAGACCTGAAGTGGGGTGTCCCGGTGCCTCTGGAGGGCTTCGAGACCA
AGGTGCTTTATGTCTGGTTTGAGGCTTGCATTGGTTACCCCTCCATCACG
GCCAACTATACCTCGGACTGGGAGCTCTGGTGGCGGAACCCGGAGGATGT
TCAGCTGTATCAGTTCCTGGGCAAGGATAACGTTCCCTTCCACAGTGTTA
TCTTCCCTGGTTCTCAGCTAGGAACCAAGGAGAAGTGGACTATGCTTCAC
CACCTGAGCACCACGGAATACTTGAATTACGAAGGTGGCAAGTTCAGCAA
GTCTAGAGGCATTGGTGTCTTTGGTACCAGCGCCAAGGAGACGGGTGTGC
CCCCGGATGTGTGGCGCTACTACCTCCTGAAGAACCGTCCCGAGACTGGT
GATACCCAGTTCGAATGGCGCTCCTTCGTTGAGAGCAACAACAGCGAGCT
GCTGGCTAAGCTGGGCAACCTTGTCAACCGTGTCATCAAGCTTGTTACGG
CATCCTACGGCTCGGTCGTTCCCGAGTTCACTGTCCCCGAGAGTTTCCAG
CCTACCTTGGATGAAGTCACGGCTACTCTCAGACAGTACATTGAAGAGAT
GGAGGGTGCACACCTCCGCGCTGGTGTGGTGAGTGCGATGAAGCTGGCCG
AAGCCGGCAACGGACTGATCCAGGCCAACCGCCTTGATAACTCGTTGATT
GCCAACGAGCCCGAGCGTGCTGCCGCGGTTGTCGGTACTGTGCTCAACCT
GATTCATCTCCTGGCCAGTGTTTTCTCTCCCTACCTCCCCGCCACCTCCA
AGTCGATCAACGAGCAGCTCGACGTGCCGTTCGGCCTGATCCCCTCTCTG
GAGGACATCAAGGACGGCTGGAAGCCGACTGCCATCAAGCCGGGTCACAA
GATCGGCAAGGCCAAGTACCTCTTCTCTCGTATCGACCCCAAGAAGGCCG
ACGAGTGGCGCGAGATGTTCGGTGGTTCCCAGGCCGACCGCCAGAAGAAG
GAAGAGGAGGCGGCTAAGGCAGCGGCCAAGAAGGCCGCAAAGGATGCCGC
TAAGGCCAAGAAGAAGGAGAAGAAGGCCAAGGCTGCTGAGGCCGCTGCCG
CTGGTGCTGATGCTGGCAGCAATGTTGAAGCCTCCGCCAAGGGAGGCGCC
CAGGCTGTGGAGGTCACCACCGATAGCAAGAACGACGAGGCCGTTGAGAA
GGTCGCCGATGGCGTGGCCCAGGTCACCATTCCCTCCTCCTAAATGGCTT
CAGACTCCAAGATCTTGCCCAAGAAGGGCCAGCGCAATATCCTGGTCACC
AGTGCTTTGCCCTACGTTAACAATGTGCCTCACTTGGGTAACATTGTTGG
TTCCGTTCTCAGTGCTGATGTCTTCGCCAGATTCCACAAGGCTTGCGGAC
ATCAAACACTGTACATCTGTGGTACCGATGAATATGGAACGGCAACGGAG
ACCAAGGCTTTGGAGGAGAAGGTGACCCCGGAGGAGCTGTGCGCCAAGTA
CAACAAGATCCACCAGCAGGTGTACGAATGGTTTGAAATTGGCTTCGATC
ACTTCGGACGCACCCCGACCCAGCAACACACCGAGATTTCCCAGGCCATC
TTCAAGAAGCTGTATGAGAACGGCTATCTGACGGAGAAGACGGCGGAGCA
GCCGTTCTGTGAGACACATGGCTCTTTCTTGGCGGATCGTTACGTGGAAG
GTGAATGCCCTCGGTGTCACTACGACGATGCTCGTGGAGACCAGTGCGAT
AAGTGCGGTCACCTCTTGGATCCCTTCGACCTTATCAACCCCCGCTGCAA
GCTTGATGGCGCCACCCCCGTCCGCCGCTCGACGAAACACATCCACCTTC
TCCTCGACAAGCTCCAGCCTCAGATCGAAGAATGGTCTAAGAATGCCATC
GAAAAGGGCGACTGGCCTAAGAACTCGCGTGTCATTACCGAGTCTTGGTT
GAAGGAAGGTCTGAAGGACCGCGGTATCACCAGAGACCTGAAGTGGGGTG
TCCCGGTGCCTCTGGAGGGCTTCGAGACCAAGGTGCTTTATGTCTGGTTT
GAGGCTTGCATTGGTTACCCCTCCATCACGGCCAACTATACCTCGGACTG
GGAGCTCTGGTGGCGGAACCCGGAGGATGTTCAGCTGTATCAGTTCCTGG
GCAAGGATAACGTTCCCTTCCACAGTGTTATCTTCCCTGGTTCTCAGCTA
GGAACCAAGGAGAAGTGGACTATGCTTCACCACCTGAGCACCACGGAATA
CTTGAATTACGAAGGTGGCAAGTTCAGCAAGTCTAGAGGCATTGGTGTCT
TTGGTACCAGCGCCAAGGAGACGGGTGTGCCCCCGGATGTGTGGCGCTAC
TACCTCCTGAAGAACCGTCCCGAGACTGGTGATACCCAGTTCGAATGGCG
CTCCTTCGTTGAGAGCAACAACAGCGAGCTGCTGGCTAAGCTGGGCAACC
TTGTCAACCGTGTCATCAAGCTTGTTACGGCATCCTACGGCTCGGTCGTT
CCCGAGTTCACTGTCCCCGAGAGTTTCCAGCCTACCTTGGATGAAGTCAC
GGCTACTCTCAGACAGTACATTGAAGAGATGGAGGGTGCACACCTCCGCG
CTGGTGTGGTGAGTGCGATGAAGCTGGCCGAAGCCGGCAACGGACTGATC
CAGGCCAACCGCCTTGATAACTCGTTGATTGCCAACGAGCCCGAGCGTGC
TGCCGCGGTTGTCGGTACTGTGCTCAACCTGATTCATCTCCTGGCCAGTG
TTTTCTCTCCCTACCTCCCCGCCACCTCCAAGTCGATCAACGAGCAGCTC
GACGTGCCGTTCGGCCTGATCCCCTCTCTGGAGGACATCAAGGACGGCTG
GAAGCCGACTGCCATCAAGCCGGGTCACAAGATCGGCAAGGCCAAGTACC
TCTTCTCTCGTATCGACCCCAAGAAGGCCGACGAGTGGCGCGAGATGTTC
GGTGGTTCCCAGGCCGACCGCCAGAAGAAGGAAGAGGAGGCGGCTAAGGC
AGCGGCCAAGAAGGCCGCAAAGGATGCCGCTAAGGCCAAGAAGAAGGAGA
AGAAGGCCAAGGCTGCTGAGGCCGCTGCCGCTGGTGCTGATGCTGGCAGC
AATGTTGAAGCCTCCGCCAAGGGAGGCGCCCAGGCTGTGGAGGTCACCAC
CGATAGCAAGAACGACGAGGCCGTTGAGAAGGTCGCCGATGGCGTGGCCC
AGGTCACCATTCCCTCCTCCTAAATGGCTTCAGACTCCAAGATCTTGCCC
AAGAAGGGCCAGCGCAATATCCTGGTCACCAGTGCTTTGCCCTACGTTAA
CAATGTGCCTCACTTGGGTAACATTGTTGGTTCCGTTCTCAGTGCTGATG
TCTTCGCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006431methionyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
GO:0004825methionine-tRNA ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MES1ATCC64974_106090Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106090-T1ATCC64974_106090-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106090-T1.cdsATCC64974_106090-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106090-T1.exon2ATCC64974_106090-T1.exon2Aspergillus niger N402exon
ATCC64974_106090-T1.exon1ATCC64974_106090-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09260TUT
DBxrefInterPro:IPR009080
DBxrefInterPro:IPR041872
DBxrefInterPro:IPR001412
DBxrefInterPro:IPR014758
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR029038
DBxrefInterPro:IPR015413
DBxrefInterPro:IPR033911
DBxrefPFAM:PF09334
Productmethionine--tRNA ligase mes1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3224322..3226420 -
Powered by Drupal