You are here

Home

ATCC64974_106370-T1, ATCC64974_106370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106370-T1
Unique NameATCC64974_106370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3309424..3310597-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106370-T1 ID=ATCC64974_106370-T1|Name=ATCC64974_106370-T1|organism=Aspergillus niger N402|type=mRNA|length=1174bp|location=Sequence derived from alignment at OGUI01000017.1:3309424..3310597- (Aspergillus niger N402)
ATGTCGTTTTCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGCTCAGGA
TGACCGAAGTTCTCAAATATCCCATGCACGGTCTCAAGCTACCGCTCGAT
CATATACCAGCACGGCTGCGACCAGCGTTAGCATATCTGGTGATATCTCT
AGCCAGCTTCATTCTGGCTATAGTCATCCACTGAGTAGATCATGGCAAGC
CGAGAAGCAGTTGACCAAGGTTCGTACTACGACATAGTCCTGTACTAGCA
TGGTCTAATTGTGCGCAGGAGATGCTCATATATCCCCTTTTCATTACCGA
TAACCCTGATGAGGAGACGCCTATTCCATCCCTTCCAAATCAGTATCGCC
GAGGGCTGAATCGGTTGGTCCCCTTCTTAAGACCATTAGTACAGAAAGGC
CTGCGTTCCGTGATTCTGTTCGGTGTCCCTTTGCATCCATCTGCAAAGGA
TGCGCTGGGAACCGCTGCAGATGACCCGACCGGTCCAGTAGTTCAGGCCA
TCCGCCTTCTTCGTTCGCGCTTTCCTCAACTTTATATCGTGACGGATGTT
TGTCTTTGTGAATATACCTCACATGGTCATTGCGGGATACTACGTGAGGA
TGGGACGCTCGATAACGCACAGTCCGTTGATAGAATCTCAGATGTAGCCC
TCGCCTATGCTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGATATGAAT
GACGGCAGAGTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTGGTATAGC
TCATCGTGTCCTCCTAATGTCCTACAGTGCAAAATTCAGTGGATGTCTAT
ATGGTCCCTTCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGGAGACCGC
AGGTGTTACCAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGCGAGCGAT
ACAGCGCGATATTGGTGAGGGCGCAGACATCATAATGGTGAAGCCCGCTA
GTAGCTATTTGGATATCATACGGGACGCCAAGGAGCTCGCCAAAGACATG
CCAGTTGCCGCTTACCAAGTTAGCGGAGAGTATGCCATGATACATGCAGG
GGCTAAGGCTGGCGTTTTCGATTTGAAATCAATGGCTTTCGAGAGCACAG
AGGGTATACTACGGGCAGGAGCTGGTATTATTGTGAGCTACTTTGTGCCC
GACTTTCTGGATTGGCTTTCTTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3309424..3310597-

>ATCC64974_106370-T1 ID=ATCC64974_106370-T1|Name=ATCC64974_106370-T1|organism=Aspergillus niger N402|type=CDS|length=2250bp|location=Sequence derived from alignment at OGUI01000017.1:3309424..3310597- (Aspergillus niger N402)
GAGATGCTCATATATCCCCTTTTCATTACCGATAACCCTGATGAGGAGAC
GCCTATTCCATCCCTTCCAAATCAGTATCGCCGAGGGCTGAATCGGTTGG
TCCCCTTCTTAAGACCATTAGTACAGAAAGGCCTGCGTTCCGTGATTCTG
TTCGGTGTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGGAACCGCTGC
AGATGACCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTCTTCGTTCGC
GCTTTCCTCAACTTTATATCGTGACGGATGTTTGTCTTTGTGAATATACC
TCACATGGTCATTGCGGGATACTACGTGAGGATGGGACGCTCGATAACGC
ACAGTCCGTTGATAGAATCTCAGATGTAGCCCTCGCCTATGCTGCTGCCG
GTGCTCACTGCGTGGCTCCGTCAGATATGAATGACGGCAGAGTCCGCGCC
ATAAAGCTGAAGCTTATTGAAGCTGGTATAGCTCATCGTGTCCTCCTAAT
GTCCTACAGTGCAAAATTCAGTGGATGTCTATATGGTCCCTTCCGAGATG
CCGCAGGCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTACCAATTACCC
CCAGGTGGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGATATTGGTGA
GGGCGCAGACATCATAATGGTGAAGCCCGCTAGTAGCTATTTGGATATCA
TACGGGACGCCAAGGAGCTCGCCAAAGACATGCCAGTTGCCGCTTACCAA
GTTAGCGGAGAGTATGCCATGATACATGCAGGGGCTAAGGCTGGCGTTTT
CGATTTGAAATCAATGGCTTTCGAGAGCACAGAGGGTATACTACGGGCAG
GAGCTGGTATTATTGTGAGCTACTTTGTGCCCGACTTTCTGGATTGGCTT
TCTTAAATGTCGTTTTCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGC
TCAGGATGACCGAAGTTCTCAAATATCCCATGCACGGTCTCAAGCTACCG
CTCGATCATATACCAGCACGGCTGCGACCAGCGTTAGCATATCTGGTGAT
ATCTCTAGCCAGCTTCATTCTGGCTATAGTCATCCACTGAGTAGATCATG
GCAAGCCGAGAAGCAGTTGACCAAGGAGATGCTCATATATCCCCTTTTCA
TTACCGATAACCCTGATGAGGAGACGCCTATTCCATCCCTTCCAAATCAG
TATCGCCGAGGGCTGAATCGGTTGGTCCCCTTCTTAAGACCATTAGTACA
GAAAGGCCTGCGTTCCGTGATTCTGTTCGGTGTCCCTTTGCATCCATCTG
CAAAGGATGCGCTGGGAACCGCTGCAGATGACCCGACCGGTCCAGTAGTT
CAGGCCATCCGCCTTCTTCGTTCGCGCTTTCCTCAACTTTATATCGTGAC
GGATGTTTGTCTTTGTGAATATACCTCACATGGTCATTGCGGGATACTAC
GTGAGGATGGGACGCTCGATAACGCACAGTCCGTTGATAGAATCTCAGAT
GTAGCCCTCGCCTATGCTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGA
TATGAATGACGGCAGAGTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTG
GTATAGCTCATCGTGTCCTCCTAATGTCCTACAGTGCAAAATTCAGTGGA
TGTCTATATGGTCCCTTCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGG
AGACCGCAGGTGTTACCAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGC
GAGCGATACAGCGCGATATTGGTGAGGGCGCAGACATCATAATGGTGAAG
CCCGCTAGTAGCTATTTGGATATCATACGGGACGCCAAGGAGCTCGCCAA
AGACATGCCAGTTGCCGCTTACCAAGTTAGCGGAGAGTATGCCATGATAC
ATGCAGGGGCTAAGGCTGGCGTTTTCGATTTGAAATCAATGGCTTTCGAG
AGCACAGAGGGTATACTACGGGCAGGAGCTGGTATTATTGTGAGCTACTT
TGTGCCCGACTTTCTGGATTGGCTTTCTTAAATGTCGTTTTCAAACCTTG
TTTCTGACCTTGCGTTCAGAGACGCTCAGGATGACCGAAGTTCTCAAATA
TCCCATGCACGGTCTCAAGCTACCGCTCGATCATATACCAGCACGGCTGC
GACCAGCGTTAGCATATCTGGTGATATCTCTAGCCAGCTTCATTCTGGCT
ATAGTCATCCACTGAGTAGATCATGGCAAGCCGAGAAGCAGTTGACCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004655porphobilinogen synthase activity
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HEM2ATCC64974_106370Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106370-T1ATCC64974_106370-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106370-T1.cdsATCC64974_106370-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106370-T1.exon2ATCC64974_106370-T1.exon2Aspergillus niger N402exon
ATCC64974_106370-T1.exon1ATCC64974_106370-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092630N3
DBxrefInterPro:IPR030656
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001731
DBxrefPFAM:PF00490
ProductAminolevulinate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3309424..3310597 -
Powered by Drupal