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ATCC64974_106380-T1, ATCC64974_106380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106380-T1
Unique NameATCC64974_106380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3400877..3401951-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106380-T1 ID=ATCC64974_106380-T1|Name=ATCC64974_106380-T1|organism=Aspergillus niger N402|type=mRNA|length=1075bp|location=Sequence derived from alignment at OGUI01000017.1:3400877..3401951- (Aspergillus niger N402)
ATGCGAGTAAGAGGGGCACCCGCTATTGCCATTGTAGCGGCCCTCGCTCT
TGCATCCGAGCTTCATAGGCTCATGGCATGCAATAACATACCTTCGGAAG
CCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCTCGATTATCTCGTGAGC
AGCAGGCCCACAGCAGTGAATCTTGCCGATGCTGCTCGGAAACTCAGGGC
CGTGGCGAGTGATCATACACAAAGGCCTGGATCGACCGGGCGCAGCGTCG
CTACTGCTTTGATACAAGCAGCAGAGGAAATGCTGAAGAAGGATATCGAG
GACAATAAAAACATAGGAAAGCATGGTGCCCAATGGATCATGGCCAATGC
CGCGGGTAAGCCGAAGGCTACTGTTCTCACTCATTGCAATACGGGGTAAG
TACAGCGAAGCTCAACTGCAGGTTATCCGGTTCTAACCCGCTGTCAGCTC
CCTTGCAACATCAGGATACGGCACTGCGCTCGGGGTTATCCGCGCCCTTG
CGTCTGCAGACAATTTGAACCATGCTTACTGCACCGAGACACGACCCTAC
AATCAAGGATCTCGGTTGACTGCGTTCGAATTGGTCCACGACCGTCTCCC
CGCCACCCTCATAACAGACTCCATGGCCGCTGCTCTACTTGCGAAGTCTG
GTTCTAAGGTAGATGCCATCGTAGTGGGGGCGGATAGGGTGGCTGCTAAC
GGAGATACGGCGAATAAAATTGGTACTTATGGCCTCGCTGTGCTTGCAAG
GTATCACGGTGTAAAGTTCCTCGTCGCTGCACCGCTTACTACAATTGATC
TGGCCACCCCATCCGGGAATGAAATCATAATCGAGGAACGTGCGGCCTCC
GAGGTCACAAATGTCAGAGGGCCGCGTGCCAGCAATTCTACCAATGGGAT
TGAACTAGAAACTGTGCGCATAGCCGCCGATGGCATCGATGTCTGGAACC
CGGCCTTTGATGTCACACCGTCCACACTTATTGACGGTATCATTACAGAG
AGGGGCGTGGTCGAGAAGGACGCCAGTGGACAATTTCACTTGGAGGACTT
GTTTCGCAACTCATCTTCAACATGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3400877..3401951-

>ATCC64974_106380-T1 ID=ATCC64974_106380-T1|Name=ATCC64974_106380-T1|organism=Aspergillus niger N402|type=CDS|length=2046bp|location=Sequence derived from alignment at OGUI01000017.1:3400877..3401951- (Aspergillus niger N402)
CTCCCTTGCAACATCAGGATACGGCACTGCGCTCGGGGTTATCCGCGCCC
TTGCGTCTGCAGACAATTTGAACCATGCTTACTGCACCGAGACACGACCC
TACAATCAAGGATCTCGGTTGACTGCGTTCGAATTGGTCCACGACCGTCT
CCCCGCCACCCTCATAACAGACTCCATGGCCGCTGCTCTACTTGCGAAGT
CTGGTTCTAAGGTAGATGCCATCGTAGTGGGGGCGGATAGGGTGGCTGCT
AACGGAGATACGGCGAATAAAATTGGTACTTATGGCCTCGCTGTGCTTGC
AAGGTATCACGGTGTAAAGTTCCTCGTCGCTGCACCGCTTACTACAATTG
ATCTGGCCACCCCATCCGGGAATGAAATCATAATCGAGGAACGTGCGGCC
TCCGAGGTCACAAATGTCAGAGGGCCGCGTGCCAGCAATTCTACCAATGG
GATTGAACTAGAAACTGTGCGCATAGCCGCCGATGGCATCGATGTCTGGA
ACCCGGCCTTTGATGTCACACCGTCCACACTTATTGACGGTATCATTACA
GAGAGGGGCGTGGTCGAGAAGGACGCCAGTGGACAATTTCACTTGGAGGA
CTTGTTTCGCAACTCATCTTCAACATGAATGCGAGTAAGAGGGGCACCCG
CTATTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTC
ATGGCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTAT
TGCGAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATC
TTGCCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAA
AGGCCTGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGC
AGAGGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGC
ATGGTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACT
GTTCTCACTCATTGCAATACGGGCTCCCTTGCAACATCAGGATACGGCAC
TGCGCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATG
CTTACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCG
TTCGAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCAT
GGCCGCTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAG
TGGGGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGT
ACTTATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGT
CGCTGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAA
TCATAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCG
CGTGCCAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGC
CGCCGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCA
CACTTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCC
AGTGGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATG
AATGCGAGTAAGAGGGGCACCCGCTATTGCCATTGTAGCGGCCCTCGCTC
TTGCATCCGAGCTTCATAGGCTCATGGCATGCAATAACATACCTTCGGAA
GCCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCTCGATTATCTCGTGAG
CAGCAGGCCCACAGCAGTGAATCTTGCCGATGCTGCTCGGAAACTCAGGG
CCGTGGCGAGTGATCATACACAAAGGCCTGGATCGACCGGGCGCAGCGTC
GCTACTGCTTTGATACAAGCAGCAGAGGAAATGCTGAAGAAGGATATCGA
GGACAATAAAAACATAGGAAAGCATGGTGCCCAATGGATCATGGCCAATG
CCGCGGGTAAGCCGAAGGCTACTGTTCTCACTCATTGCAATACGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0044249cellular biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRI1ATCC64974_106380Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106380-T1ATCC64974_106380-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106380-T1.cdsATCC64974_106380-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106380-T1.exon2ATCC64974_106380-T1.exon2Aspergillus niger N402exon
ATCC64974_106380-T1.exon1ATCC64974_106380-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR042529
DBxrefInterPro:IPR000649
DBxrefInterPro:IPR005251
DBxrefInterPro:IPR011559
DBxrefPFAM:PF01008
ProductS-methyl-5-thioribose-1-phosphate isomerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3400877..3401951 -
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