You are here

Home

ATCC64974_106400-T1, ATCC64974_106400-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106400-T1
Unique NameATCC64974_106400-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3405119..3405624+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106400-T1 ID=ATCC64974_106400-T1|Name=ATCC64974_106400-T1|organism=Aspergillus niger N402|type=mRNA|length=506bp|location=Sequence derived from alignment at OGUI01000017.1:3405119..3405624+ (Aspergillus niger N402)
ATGAAGCTCATCACTGTCAATTTCCTAGCCTGTGCTGTGAAGGGGTGCAA
AACAGCAGCAGCATCATATCCGCTGCATTTTCGAGATGCGGAATTAGAAT
TGCAAGAACTTGAGTTCCAGCCAGAGTTCATATTGAATATCATTCCTCGG
ATTGATTGGGAAGGCCTGCGAGTCATGGCAAATGAGGTGCGTGTACATTG
ATCCAATGCAAATCATACCATATGCTGTATAGGCCGTTTGAACTCACCCG
GACATAGCTCGGTTTTCCCAAAATTCCTGACACTAAACCGGAAGGTGATG
CGCTTAATGATGAGCAGCTTCTAAAGGAACTCCACAAGCTCTTGTTGGAA
ACACAAGTTGTTGAAGGAAGATTGTGTTGCGGAAATTGCGGCCACGAATA
TATGATCAAGGAAGGAATCGCTAACTTTCTTCTTCCTAGTCATTTGGGTC
TGATAATCCTTTCCGGTTGATTTGTCTTTGGACCTTGCTGACCAAGCACA
GTTTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3405119..3405624+

>ATCC64974_106400-T1 ID=ATCC64974_106400-T1|Name=ATCC64974_106400-T1|organism=Aspergillus niger N402|type=CDS|length=1143bp|location=Sequence derived from alignment at OGUI01000017.1:3405119..3405624+ (Aspergillus niger N402)
ATGAAGCTCATCACTGTCAATTTCCTAGCCTGTGCTGTGAAGGGGTGCAA
AACAGCAGCAGCATCATATCCGCTGCATTTTCGAGATGCGGAATTAGAAT
TGCAAGAACTTGAGTTCCAGCCAGAGTTCATATTGAATATCATTCCTCGG
ATTGATTGGGAAGGCCTGCGAGTCATGGCAAATGAGCTCGGTTTTCCCAA
AATTCCTGACACTAAACCGGAAGGTGATGCGCTTAATGATGAGCAGCTTC
TAAAGGAACTCCACAAGCTCTTGTTGGAAACACAAGTTGTTGAAGGAAGA
TTGTGTTGCGGAAATTGCGGCCACGAATATATGATCAAGGAAGGAATCGC
TAACTTTCTTCTTCCTAGTCATTTGGTTTAAATGAAGCTCATCACTGTCA
ATTTCCTAGCCTGTGCTGTGAAGGGGTGCAAAACAGCAGCAGCATCATAT
CCGCTGCATTTTCGAGATGCGGAATTAGAATTGCAAGAACTTGAGTTCCA
GCCAGAGTTCATATTGAATATCATTCCTCGGATTGATTGGGAAGGCCTGC
GAGTCATGGCAAATGAGCTCGGTTTTCCCAAAATTCCTGACACTAAACCG
GAAGGTGATGCGCTTAATGATGAGCAGCTTCTAAAGGAACTCCACAAGCT
CTTGTTGGAAACACAAGTTGTTGAAGGAAGATTGTGTTGCGGAAATTGCG
GCCACGAATATATGATCAAGGAAGGAATCGCTAACTTTCTTCTTCCTAGT
CATTTGGTTTAAATGAAGCTCATCACTGTCAATTTCCTAGCCTGTGCTGT
GAAGGGGTGCAAAACAGCAGCAGCATCATATCCGCTGCATTTTCGAGATG
CGGAATTAGAATTGCAAGAACTTGAGTTCCAGCCAGAGTTCATATTGAAT
ATCATTCCTCGGATTGATTGGGAAGGCCTGCGAGTCATGGCAAATGAGCT
CGGTTTTCCCAAAATTCCTGACACTAAACCGGAAGGTGATGCGCTTAATG
ATGAGCAGCTTCTAAAGGAACTCCACAAGCTCTTGTTGGAAACACAAGTT
GTTGAAGGAAGATTGTGTTGCGGAAATTGCGGCCACGAATATATGATCAA
GGAAGGAATCGCTAACTTTCTTCTTCCTAGTCATTTGGTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106400ATCC64974_106400Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106400-T1.exon1ATCC64974_106400-T1.exon1Aspergillus niger N402exon
ATCC64974_106400-T1.exon2ATCC64974_106400-T1.exon2Aspergillus niger N402exon
ATCC64974_106400-T1.exon3ATCC64974_106400-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106400-T1.cdsATCC64974_106400-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106400-T1ATCC64974_106400-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265F2Y
DBxrefInterPro:IPR005651
DBxrefPFAM:PF03966
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3405119..3405624 +
Powered by Drupal