You are here

Home

ATCC64974_106490-T1, ATCC64974_106490-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106490-T1
Unique NameATCC64974_106490-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3426513..3427357+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106490-T1 ID=ATCC64974_106490-T1|Name=ATCC64974_106490-T1|organism=Aspergillus niger N402|type=mRNA|length=845bp|location=Sequence derived from alignment at OGUI01000017.1:3426513..3427357+ (Aspergillus niger N402)
ATGTGGATCCTACCCTTGGTAGGGTATTTGGGGGTCATTGTCGGGTTCGC
TTTCCTTACCTTAGCGATAGGTATGATATGCCCGCAATGCGCGCGATGAT
GATGACGACGACTGGTCTTGCTCTCGTCACCATAGACAATAGGACGAGAT
GCCAAGCTCACATGACTTGTGATACTATCTGTATTCATCAGGCTGACCTC
TTTCTAGCCTCCGGCCTTTACTACCTCTCGGAGCTTGTGGAGGAGCATAC
AGTTCTTGCCCGTCGGCTGTTGTACCGGCTGATATACAGCATCATCGCCG
TTCAGATCCTCCTCTACGTATTTGACCGATTTCCTTTCTCCTTGACCGCC
CTCAGCATCGGCTCGCATATCGTATATGCCAGCAATCTCCGCCGGTTCCC
CATAGTCAAGTTGTCCGACCCTCTCTTCATCCTGTCATGTGGGCTCGTCG
GTTTGAATCATTGGCTCTGGTTTCGCCATTTTTCACAGCCATTACCTTCA
TCGCGCGGCGCCACAAGCTGGCGCCAGCCGTATCAGATTAATGTGGAGGA
TATGCCCACCTTCACGGAGGTTGCGTCTTACTTTGGACTCTGTGTCTGGC
TGGTACCATTTGCGCTCTTCGTCAGCCTCAGCGCGGGCGATAATGTCTTG
CCTACTATGGGCTCCGAGTATGCCACAGGTGACCGTGTGCCTACTTCGGG
GTTTACCCCGGGTACGTTTTCGTCCGATGGCAAGTCCAAGAACAAGGGAA
TGGCCAAGGCCCTGGTGGATGGTGTGCGGGACTGGGTTAAGGATAACGGG
GAATTGATGGGTTTCTGGAAAGGTGAACGGGCAAAAGGCTTCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3426513..3427357+

>ATCC64974_106490-T1 ID=ATCC64974_106490-T1|Name=ATCC64974_106490-T1|organism=Aspergillus niger N402|type=CDS|length=1416bp|location=Sequence derived from alignment at OGUI01000017.1:3426513..3427357+ (Aspergillus niger N402)
ATGTGGATCCTACCCTTGGTAGGGTATTTGGGGGTCATTGTCGGGTTCGC
TTTCCTTACCTTAGCGATAGCCTCCGGCCTTTACTACCTCTCGGAGCTTG
TGGAGGAGCATACAGTTCTTGCCCGTCGGCTGTTGTACCGGCTGATATAC
AGCATCATCGCCGTTCAGATCCTCCTCTACGTATTTGACCGATTTCCTTT
CTCCTTGACCGCCCTCAGCATCGGCTCGCATATCGTATATGCCAGCAATC
TCCGCCGGTTCCCCATAGTCAAGTTGTCCGACCCTCTCTTCATCCTGTCA
TGTGGGCTCGTCGGTTTGAATCATTGGCTCTGGTTTCGCCATTTTTCACA
GCCATTACCTTCATCGCGCGGCGCCACAAGCTGGCGCCAGCCGTATCAGA
TTAATGTGGAGGATATGCCCACCTTCACGGAGGTTGCGTCTTACTTTGGA
CTCTGTGTCTGGCTGGTACCATTTGCGCTCTTCGTCAGCCTCAGCGCGGG
CGATAATGTCTTGCCTACTATGGGCTCCGAGTATGCCACAGGTGACCGTG
TGCCTACTTCGGGGTTTACCCCGGGTACGTTTTCGTCCGATGGCAAGTCC
AAGAACAAGGGAATGGCCAAGGCCCTGGTGGATGGTGTGCGGGACTGGGT
TAAGGATAACGGGGAATTGATGGGTTTCTGGAAAGGTGAACGGGCAAAAG
GCTTCTAGATGTGGATCCTACCCTTGGTAGGGTATTTGGGGGTCATTGTC
GGGTTCGCTTTCCTTACCTTAGCGATAGCCTCCGGCCTTTACTACCTCTC
GGAGCTTGTGGAGGAGCATACAGTTCTTGCCCGTCGGCTGTTGTACCGGC
TGATATACAGCATCATCGCCGTTCAGATCCTCCTCTACGTATTTGACCGA
TTTCCTTTCTCCTTGACCGCCCTCAGCATCGGCTCGCATATCGTATATGC
CAGCAATCTCCGCCGGTTCCCCATAGTCAAGTTGTCCGACCCTCTCTTCA
TCCTGTCATGTGGGCTCGTCGGTTTGAATCATTGGCTCTGGTTTCGCCAT
TTTTCACAGCCATTACCTTCATCGCGCGGCGCCACAAGCTGGCGCCAGCC
GTATCAGATTAATGTGGAGGATATGCCCACCTTCACGGAGGTTGCGTCTT
ACTTTGGACTCTGTGTCTGGCTGGTACCATTTGCGCTCTTCGTCAGCCTC
AGCGCGGGCGATAATGTCTTGCCTACTATGGGCTCCGAGTATGCCACAGG
TGACCGTGTGCCTACTTCGGGGTTTACCCCGGGTACGTTTTCGTCCGATG
GCAAGTCCAAGAACAAGGGAATGGCCAAGGCCCTGGTGGATGGTGTGCGG
GACTGGGTTAAGGATAACGGGGAATTGATGGGTTTCTGGAAAGGTGAACG
GGCAAAAGGCTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0097020COPII adaptor activity
Vocabulary: Biological Process
TermDefinition
GO:0006888endoplasmic reticulum to Golgi vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106490ATCC64974_106490Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106490-T1.exon1ATCC64974_106490-T1.exon1Aspergillus niger N402exon
ATCC64974_106490-T1.exon2ATCC64974_106490-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106490-T1.cdsATCC64974_106490-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106490-T1ATCC64974_106490-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007277
DBxrefPFAM:PF04148
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3426513..3427357 +
Powered by Drupal