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ATCC64974_106520-T1, ATCC64974_106520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106520-T1
Unique NameATCC64974_106520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3436212..3437121+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106520-T1 ID=ATCC64974_106520-T1|Name=ATCC64974_106520-T1|organism=Aspergillus niger N402|type=mRNA|length=910bp|location=Sequence derived from alignment at OGUI01000017.1:3436212..3437121+ (Aspergillus niger N402)
ATGCTTGCACCCACAGCTTTACGGCAAACTGCCGAAGTAGCAATGGCAGA
GACGCCTGTTGCGCCTACTATGTCAGGTCAGTCCCCGCCAGCGCTTTACG
GGAACCCGACTGGGTGGCCATCCTAACGTCCATTAGAGCAAGATGAGGAA
ATTTTGATCGACGCCCAAACGTCGGCAGATCAGGTCTCTGCAGGACTCGC
GCCTGAGATTGAGCCTACTCAAGACAGCGATATGCGTATTGACGAAGAGG
GACGGCCCCTCTTCACACCAGCAAAAGACACTAGCAGGGTATATCGAGTT
GAAAGCAGGAAGGTTCCTGTACCACCGCATAGGATGACTCCATTGAAGGC
TAGCTGGGCACGCATCTATCCCCCGCTTGTCGAACACCTCAAACTTCAAG
TGCGGATGAACATCAAGAACCGAGCTGTGGAGCTACGTACGTCACGATTC
ACGACCGATACGGAAGCCCTGCAGAAGGGCGAGGACTTCGTCAAAGCTTT
TACTCTTGGATTTGATGTCGACGACGCTATCGCACTTCTCAGATTGGATG
ATCTTTACATACGTTCATTCGAGATTCGGGATATCAAAGCCCTTAACGGA
GAGCACCTCAGTCGTGCAATTGGACGCTGTGCTGGTAAAGATGGGCGAAC
AAAGTTTGCTATAGAGAACGCTACTCGGACAAGAATCGTCATTGCAGACC
AGAAGATTCACTTGCTAGGCGCAGTGAAGAATGTCGACTGTGCCCAGCAG
GCCATTGTTAGCTTGATTCTTGGCAGTCCACCGGTCAGTAACCTTGTGCC
AATCCTTTCTATTGTCGTTTCAGAAGATGCAACATCTGCTAACTCCTCAA
TAGGGCAAAGTGTATGGGAACCTTCGTAAGGTGGCTTCTCGCATGAAGGA
GCGTTTTTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3436212..3437121+

>ATCC64974_106520-T1 ID=ATCC64974_106520-T1|Name=ATCC64974_106520-T1|organism=Aspergillus niger N402|type=CDS|length=2340bp|location=Sequence derived from alignment at OGUI01000017.1:3436212..3437121+ (Aspergillus niger N402)
ATGCTTGCACCCACAGCTTTACGGCAAACTGCCGAAGTAGCAATGGCAGA
GACGCCTGTTGCGCCTACTATGTCAGAGCAAGATGAGGAAATTTTGATCG
ACGCCCAAACGTCGGCAGATCAGGTCTCTGCAGGACTCGCGCCTGAGATT
GAGCCTACTCAAGACAGCGATATGCGTATTGACGAAGAGGGACGGCCCCT
CTTCACACCAGCAAAAGACACTAGCAGGGTATATCGAGTTGAAAGCAGGA
AGGTTCCTGTACCACCGCATAGGATGACTCCATTGAAGGCTAGCTGGGCA
CGCATCTATCCCCCGCTTGTCGAACACCTCAAACTTCAAGTGCGGATGAA
CATCAAGAACCGAGCTGTGGAGCTACGTACGTCACGATTCACGACCGATA
CGGAAGCCCTGCAGAAGGGCGAGGACTTCGTCAAAGCTTTTACTCTTGGA
TTTGATGTCGACGACGCTATCGCACTTCTCAGATTGGATGATCTTTACAT
ACGTTCATTCGAGATTCGGGATATCAAAGCCCTTAACGGAGAGCACCTCA
GTCGTGCAATTGGACGCTGTGCTGGTAAAGATGGGCGAACAAAGTTTGCT
ATAGAGAACGCTACTCGGACAAGAATCGTCATTGCAGACCAGAAGATTCA
CTTGCTAGGCGCAGTGAAGAATGTCGACTGTGCCCAGCAGGCCATTGTTA
GCTTGATTCTTGGCAGTCCACCGGGCAAAGTGTATGGGAACCTTCGTAAG
GTGGCTTCTCGCATGAAGGAGCGTTTTTAAATGCTTGCACCCACAGCTTT
ACGGCAAACTGCCGAAGTAGCAATGGCAGAGACGCCTGTTGCGCCTACTA
TGTCAGAGCAAGATGAGGAAATTTTGATCGACGCCCAAACGTCGGCAGAT
CAGGTCTCTGCAGGACTCGCGCCTGAGATTGAGCCTACTCAAGACAGCGA
TATGCGTATTGACGAAGAGGGACGGCCCCTCTTCACACCAGCAAAAGACA
CTAGCAGGGTATATCGAGTTGAAAGCAGGAAGGTTCCTGTACCACCGCAT
AGGATGACTCCATTGAAGGCTAGCTGGGCACGCATCTATCCCCCGCTTGT
CGAACACCTCAAACTTCAAGTGCGGATGAACATCAAGAACCGAGCTGTGG
AGCTACGTACGTCACGATTCACGACCGATACGGAAGCCCTGCAGAAGGGC
GAGGACTTCGTCAAAGCTTTTACTCTTGGATTTGATGTCGACGACGCTAT
CGCACTTCTCAGATTGGATGATCTTTACATACGTTCATTCGAGATTCGGG
ATATCAAAGCCCTTAACGGAGAGCACCTCAGTCGTGCAATTGGACGCTGT
GCTGGTAAAGATGGGCGAACAAAGTTTGCTATAGAGAACGCTACTCGGAC
AAGAATCGTCATTGCAGACCAGAAGATTCACTTGCTAGGCGCAGTGAAGA
ATGTCGACTGTGCCCAGCAGGCCATTGTTAGCTTGATTCTTGGCAGTCCA
CCGGGCAAAGTGTATGGGAACCTTCGTAAGGTGGCTTCTCGCATGAAGGA
GCGTTTTTAAATGCTTGCACCCACAGCTTTACGGCAAACTGCCGAAGTAG
CAATGGCAGAGACGCCTGTTGCGCCTACTATGTCAGAGCAAGATGAGGAA
ATTTTGATCGACGCCCAAACGTCGGCAGATCAGGTCTCTGCAGGACTCGC
GCCTGAGATTGAGCCTACTCAAGACAGCGATATGCGTATTGACGAAGAGG
GACGGCCCCTCTTCACACCAGCAAAAGACACTAGCAGGGTATATCGAGTT
GAAAGCAGGAAGGTTCCTGTACCACCGCATAGGATGACTCCATTGAAGGC
TAGCTGGGCACGCATCTATCCCCCGCTTGTCGAACACCTCAAACTTCAAG
TGCGGATGAACATCAAGAACCGAGCTGTGGAGCTACGTACGTCACGATTC
ACGACCGATACGGAAGCCCTGCAGAAGGGCGAGGACTTCGTCAAAGCTTT
TACTCTTGGATTTGATGTCGACGACGCTATCGCACTTCTCAGATTGGATG
ATCTTTACATACGTTCATTCGAGATTCGGGATATCAAAGCCCTTAACGGA
GAGCACCTCAGTCGTGCAATTGGACGCTGTGCTGGTAAAGATGGGCGAAC
AAAGTTTGCTATAGAGAACGCTACTCGGACAAGAATCGTCATTGCAGACC
AGAAGATTCACTTGCTAGGCGCAGTGAAGAATGTCGACTGTGCCCAGCAG
GCCATTGTTAGCTTGATTCTTGGCAGTCCACCGGGCAAAGTGTATGGGAA
CCTTCGTAAGGTGGCTTCTCGCATGAAGGAGCGTTTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PNO1ATCC64974_106520Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106520-T1.exon1ATCC64974_106520-T1.exon1Aspergillus niger N402exon
ATCC64974_106520-T1.exon2ATCC64974_106520-T1.exon2Aspergillus niger N402exon
ATCC64974_106520-T1.exon3ATCC64974_106520-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106520-T1.cdsATCC64974_106520-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106520-T1ATCC64974_106520-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264SQJ
DBxrefInterPro:IPR036612
Productpre-rRNA-processing protein pno1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3436212..3437121 +
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