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ATCC64974_106600-T1, ATCC64974_106600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106600-T1
Unique NameATCC64974_106600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3452737..3453444-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106600-T1 ID=ATCC64974_106600-T1|Name=ATCC64974_106600-T1|organism=Aspergillus niger N402|type=mRNA|length=708bp|location=Sequence derived from alignment at OGUI01000017.1:3452737..3453444- (Aspergillus niger N402)
ATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGATCAAGGTAAACCCGC
TTCTGCTACCGGACTCCCTAACCAAACGTTAGTCTTGAATACTGCTTCCC
AATTCAAAGTGGGCACCATGGCTGACCCCAATTGCAGTTTGTATTGTACC
AACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATAT
GCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTCGCCATGAAGACCC
AAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGC
ACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAAT
GGTATGTTTTTGCATAGTGCAGTGCGGTTGTTCCTCGCTCATTGACTCGG
GAATATAGAAAATCGTGTATGCTAAGGGTCCCTCGGACGTCATTGCCCGG
CTGCGCGGAACGTATAATGTGCCCACTACAACATCTGCCAGTCAAGCCAC
GGGAGCATCCACAGAGCTCCAAAAATCGATATTTAGCGGGCCCCCAGGAT
CGGCGGCTTTGCCGTCGAAGCCCAGCGGAGAAGTTAATGGAGAACCCCAA
GCAGGCCAAGGTGTCAAGCGGCCTCGTGAAGATGAAAGCGACGAAGAGGA
AGCCCCTATGGACGAGGACAGTGATGTGCCAATGGAAGCTTCATCGGATG
AAGATTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3452737..3453444-

>ATCC64974_106600-T1 ID=ATCC64974_106600-T1|Name=ATCC64974_106600-T1|organism=Aspergillus niger N402|type=CDS|length=1773bp|location=Sequence derived from alignment at OGUI01000017.1:3452737..3453444- (Aspergillus niger N402)
AAAATCGTGTATGCTAAGGGTCCCTCGGACGTCATTGCCCGGCTGCGCGG
AACGTATAATGTGCCCACTACAACATCTGCCAGTCAAGCCACGGGAGCAT
CCACAGAGCTCCAAAAATCGATATTTAGCGGGCCCCCAGGATCGGCGGCT
TTGCCGTCGAAGCCCAGCGGAGAAGTTAATGGAGAACCCCAAGCAGGCCA
AGGTGTCAAGCGGCCTCGTGAAGATGAAAGCGACGAAGAGGAAGCCCCTA
TGGACGAGGACAGTGATGTGCCAATGGAAGCTTCATCGGATGAAGATTAA
TTTGTATTGTACCAACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGC
TATCCCTCTATATGCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTC
GCCATGAAGACCCAAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGA
TGTTCAAGCTAGCACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTT
TCGGCAAACAAATGATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGAT
CAAGGTAAACCCGCTTCTGCTACCGGACTCCCTAACCAAACAAAATCGTG
TATGCTAAGGGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAA
TGTGCCCACTACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGC
TCCAAAAATCGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCG
AAGCCCAGCGGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAA
GCGGCCTCGTGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGG
ACAGTGATGTGCCAATGGAAGCTTCATCGGATGAAGATTAATTTGTATTG
TACCAACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCT
ATATGCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTCGCCATGAAG
ACCCAAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGC
TAGCACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAAC
AAATGATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGATCAAGGTAAA
CCCGCTTCTGCTACCGGACTCCCTAACCAAACAAAATCGTGTATGCTAAG
GGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAATGTGCCCAC
TACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGCTCCAAAAAT
CGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCGAAGCCCAGC
GGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAAGCGGCCTCG
TGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGGACAGTGATG
TGCCAATGGAAGCTTCATCGGATGAAGATTAATTTGTATTGTACCAACCT
CCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATATGCTTT
TTTCAACCTACGGCACCGTTCTTGATGTTGTCGCCATGAAGACCCAAAAG
ATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGCACACA
GGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAATGATGG
CAACCAGAGTTCTTCCAGCGCGCGGTGGTGATCAAGGTAAACCCGCTTCT
GCTACCGGACTCCCTAACCAAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106600ATCC64974_106600Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106600-T1ATCC64974_106600-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106600-T1.cdsATCC64974_106600-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106600-T1.exon3ATCC64974_106600-T1.exon3Aspergillus niger N402exon
ATCC64974_106600-T1.exon2ATCC64974_106600-T1.exon2Aspergillus niger N402exon
ATCC64974_106600-T1.exon1ATCC64974_106600-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3452737..3453444 -
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