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ATCC64974_106610-T1, ATCC64974_106610-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106610-T1
Unique NameATCC64974_106610-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3453815..3455094+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106610-T1 ID=ATCC64974_106610-T1|Name=ATCC64974_106610-T1|organism=Aspergillus niger N402|type=mRNA|length=1280bp|location=Sequence derived from alignment at OGUI01000017.1:3453815..3455094+ (Aspergillus niger N402)
ATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCA
TTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATG
TGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTC
AAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGG
GCGTATCGTTACTTGTTCTCAGGGTAAGTTAACCCCCTCTCCCTTGTCCT
GCAATAGTTCCGTCTAAGTGACCACGGGAACAGACCGCAACGCCTACGTC
TGGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGAT
AAACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAACAGAAGTTCG
CTGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAG
AATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTAT
TACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGA
CTGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACG
CGCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTG
TGGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCT
CTCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACC
GTCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCAT
CGCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACG
AGATCATCGCCGCAGGCCACGTATGTCTTCTAAACAATCAATTTCAGCAG
ATGATCCAGTACGACACGTGTCGCTAACAGGAATTAACAGGATTGCGAAC
CGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATT
GAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCT
TAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCC
AACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAG
GAGGCCGATGGCGTCGTTCGCAAGTTCAGCAGTAAGAGATGCTCCCCTGC
TAAGTTGTCCTGTGGGTTGCGCTAACATCTAGATAATAGCGAGCGGAGTC
GATGGCCGTGTTGTTATCTGGACCATCTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3453815..3455094+

>ATCC64974_106610-T1 ID=ATCC64974_106610-T1|Name=ATCC64974_106610-T1|organism=Aspergillus niger N402|type=CDS|length=4368bp|location=Sequence derived from alignment at OGUI01000017.1:3453815..3455094+ (Aspergillus niger N402)
ATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCA
TTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATG
TGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTC
AAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGG
GCGTATCGTTACTTGTTCTCAGGACCGCAACGCCTACGTCTGGGAGCGGA
CCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCT
GCTACATTTGTACGGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGATC
TGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGT
GGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTT
GCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCA
TGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGC
CCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTC
TTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGG
AGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATATC
CGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGT
CTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGC
CGCAGGCCACGATTGCGAACCGTACCGCCTTCGCGGTGACGAGAACGGAT
GGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGCTGGAAGC
GCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCAAATGGATCTTAAGGG
ACAAACCCAGGCCGATACCCAACTTAAGACTACGCATCAGAATACCATCA
GCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAAGTTCAGC
ACGAGCGGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAGATGGCCGC
TCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCATTCTTTCT
CTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATGTGGAGCTT
TATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTCAAGGGCCA
TGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGGGCGTATCG
TTACTTGTTCTCAGGACCGCAACGCCTACGTCTGGGAGCGGACCCCCACG
GGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATT
TGTACGGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCTC
GCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCG
AAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCA
TCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGG
TGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCC
TGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGA
CTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGC
TTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCG
CCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCC
TTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCC
ACGATTGCGAACCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTT
GCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGA
GGAGTCTGCTCTTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCC
AGGCCGATACCCAACTTAAGACTACGCATCAGAATACCATCAGCACCGTT
AGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAAGTTCAGCACGAGCGG
AGTCGATGGCCGTGTTGTTATCTGGACCATCTAGATGGCCGCTCCCGAAG
CTCATCACCTCTTCCACAACCCAATCGCCGATCATTCTTTCTCTCCGGAT
AAGGCGACCCTTGCAGTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAA
GTCAGGCAACAAGTTCTCGTTGACCGATGAACTCAAGGGCCATGAGAAGA
CGGTGACTGGTGTGGATATCGCTCCTAACAGTGGGCGTATCGTTACTTGT
TCTCAGGACCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTGGAA
GCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTACGGT
GGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTGATC
GCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCACTT
GAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAAACT
CCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTTTCT
AGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGGTGA
ACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGGCGG
GCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTTT
ACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGAACA
GCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCAACA
GTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACGATTGC
GAACCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGAC
CATTGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTG
CTCTTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGAT
ACCCAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTA
CGAGGAGGCCGATGGCGTCGTTCGCAAGTTCAGCACGAGCGGAGTCGATG
GCCGTGTTGTTATCTGGACCATCTAGATGGCCGCTCCCGAAGCTCATCAC
CTCTTCCACAACCCAATCGCCGATCATTCTTTCTCTCCGGATAAGGCGAC
CCTTGCAGTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCA
ACAAGTTCTCGTTGACCGATGAACTCAAGGGCCATGAGAAGACGGTGACT
GGTGTGGATATCGCTCCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGA
CCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTGGAAGCCAACGC
TGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTACGGTGGTCACCA
TCTGAACAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTGATCGCGGTGTG
CTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCACTTGAAGAAGC
CCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAAACTCCGTTCTT
CTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTTTCTAGCTTCAT
CAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGC
CTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGGCGGGCTGGATT
CAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTTTACTGGCCA
TGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGAACAGCCGCCTC
GGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCAACAGTCTGATC
TGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACGATTGCGAACCGTA
CCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGA
GCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAAC
ATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACT
TAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGG
CCGATGGCGTCGTTCGCAAGTTCAGCACGAGCGGAGTCGATGGCCGTGTT
GTTATCTGGACCATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106610ATCC64974_106610Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106610-T1.exon1ATCC64974_106610-T1.exon1Aspergillus niger N402exon
ATCC64974_106610-T1.exon2ATCC64974_106610-T1.exon2Aspergillus niger N402exon
ATCC64974_106610-T1.exon3ATCC64974_106610-T1.exon3Aspergillus niger N402exon
ATCC64974_106610-T1.exon4ATCC64974_106610-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106610-T1.cdsATCC64974_106610-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106610-T1ATCC64974_106610-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262VPD
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR017383
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3453815..3455094 +
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