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ATCC64974_106670-T1, ATCC64974_106670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106670-T1
Unique NameATCC64974_106670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3480282..3481372-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106670-T1 ID=ATCC64974_106670-T1|Name=ATCC64974_106670-T1|organism=Aspergillus niger N402|type=mRNA|length=1091bp|location=Sequence derived from alignment at OGUI01000017.1:3480282..3481372- (Aspergillus niger N402)
ATGGCCACCGAAGCAGCCGGCGTTTATCCTGCCCTGCAGGACCGCCCCCT
CAAGGGCACAATCTGTCTCTTCGATGTCGACAAGACGCTAACGCCTGCCA
GAGCTGTAAGTACGCAAGAATGAAACCCTTATTACCTGGAATTGCTCTGT
TTATCCGCTCAATGCTCTAAAAAACTAACCACTTCTTTACTCCGACTTTA
GAATGTTACCCCGGAGATGCTCACGCTTCTCTCTCAGCTGCGTCACAAGT
GCGCGATCGGATTCGTTAGTTGTCTTCATCCTTCTTAGGGTCAGCGCCCA
GTCTCACATGGTCAGGTCGGTGGCTCGAATCTTCCCAAGCAGCAAGAACA
GCTCGGTAGAAACACTACGGACGTCACAACCCTATTCGATTTCTGCTTCG
CTGAGAACGGATTGACCGCTTTCCGCCTGGGCAAACCTCTTCGCAGCAAC
AGCTTCATCCAATGGCTGGGAGAGGAGAAGTACCAGAAGTTGGTCAACTT
CTTGCTCAAGTACATCGCCAACTTGGAGATTCCTAAGAAGCGCGGCACCT
TCGTTGAATTCCGCAATGGTATGATCAACGTCAGCCCGATTGGCAGGAAT
GCCAGCACCGAGGAGCGGAAGGAATTTGAAGCGTATGTATACGAGCAGTA
GCTCGATGCTCACAGGATAGGACCTTTTGACTGATATCATGAGCAGGTAT
GATAAGATTCACAACATCCGCCGAGACCTTGTAGATGCGCTCAAGAAGGA
GTTCCCTCACTATGGTCTAAGGTATGTAAAAGAATTTCCAGGCCTCTGGT
AACTGCGCAGGGTCATTACAGCCATTAACATTCCTGAACAGCTACTCTAT
TGGTGGTGAAATTTCTTTTGACGTTTTCCCGACCGGCTGGGACAAGACTT
ACTGCCTACAACACGTCGAAGCCGAGAAAGATATCACGGGTATCGATTAC
AAGACGATCCACTTCTTCGGTGACAAGACATTCCCCGGTGGTAATGACTA
CGAGATCTACAGTGACCCTAGGACGATCGGTCACTCCGTTGAGGACCCTG
ATGACACCATGAGGCAGTTGAGGGAGCTCTTCCAGCTCTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3480282..3481372-

>ATCC64974_106670-T1 ID=ATCC64974_106670-T1|Name=ATCC64974_106670-T1|organism=Aspergillus niger N402|type=CDS|length=4050bp|location=Sequence derived from alignment at OGUI01000017.1:3480282..3481372- (Aspergillus niger N402)
CTACTCTATTGGTGGTGAAATTTCTTTTGACGTTTTCCCGACCGGCTGGG
ACAAGACTTACTGCCTACAACACGTCGAAGCCGAGAAAGATATCACGGGT
ATCGATTACAAGACGATCCACTTCTTCGGTGACAAGACATTCCCCGGTGG
TAATGACTACGAGATCTACAGTGACCCTAGGACGATCGGTCACTCCGTTG
AGGACCCTGATGACACCATGAGGCAGTTGAGGGAGCTCTTCCAGCTCTAG
GTATGATAAGATTCACAACATCCGCCGAGACCTTGTAGATGCGCTCAAGA
AGGAGTTCCCTCACTATGGTCTAAGGTCGGTGGCTCGAATCTTCCCAAGC
AGCAAGAACAGCTCGGTAGAAACACTACGGACGTCACAACCCTATTCGAT
TTCTGCTTCGCTGAGAACGGATTGACCGCTTTCCGCCTGGGCAAACCTCT
TCGCAGCAACAGCTTCATCCAATGGCTGGGAGAGGAGAAGTACCAGAAGT
TGGTCAACTTCTTGCTCAAGTACATCGCCAACTTGGAGATTCCTAAGAAG
CGCGGCACCTTCGTTGAATTCCGCAATGGTATGATCAACGTCAGCCCGAT
TGGCAGGAATGCCAGCACCGAGGAGCGGAAGGAATTTGAAGCAATGTTAC
CCCGGAGATGCTCACGCTTCTCTCTCAGCTGCGTCACAAGTGCGCGATCG
GATTCATGGCCACCGAAGCAGCCGGCGTTTATCCTGCCCTGCAGGACCGC
CCCCTCAAGGGCACAATCTGTCTCTTCGATGTCGACAAGACGCTAACGCC
TGCCAGAGCTCTACTCTATTGGTGGTGAAATTTCTTTTGACGTTTTCCCG
ACCGGCTGGGACAAGACTTACTGCCTACAACACGTCGAAGCCGAGAAAGA
TATCACGGGTATCGATTACAAGACGATCCACTTCTTCGGTGACAAGACAT
TCCCCGGTGGTAATGACTACGAGATCTACAGTGACCCTAGGACGATCGGT
CACTCCGTTGAGGACCCTGATGACACCATGAGGCAGTTGAGGGAGCTCTT
CCAGCTCTAGGTATGATAAGATTCACAACATCCGCCGAGACCTTGTAGAT
GCGCTCAAGAAGGAGTTCCCTCACTATGGTCTAAGGTCGGTGGCTCGAAT
CTTCCCAAGCAGCAAGAACAGCTCGGTAGAAACACTACGGACGTCACAAC
CCTATTCGATTTCTGCTTCGCTGAGAACGGATTGACCGCTTTCCGCCTGG
GCAAACCTCTTCGCAGCAACAGCTTCATCCAATGGCTGGGAGAGGAGAAG
TACCAGAAGTTGGTCAACTTCTTGCTCAAGTACATCGCCAACTTGGAGAT
TCCTAAGAAGCGCGGCACCTTCGTTGAATTCCGCAATGGTATGATCAACG
TCAGCCCGATTGGCAGGAATGCCAGCACCGAGGAGCGGAAGGAATTTGAA
GCAATGTTACCCCGGAGATGCTCACGCTTCTCTCTCAGCTGCGTCACAAG
TGCGCGATCGGATTCATGGCCACCGAAGCAGCCGGCGTTTATCCTGCCCT
GCAGGACCGCCCCCTCAAGGGCACAATCTGTCTCTTCGATGTCGACAAGA
CGCTAACGCCTGCCAGAGCTCTACTCTATTGGTGGTGAAATTTCTTTTGA
CGTTTTCCCGACCGGCTGGGACAAGACTTACTGCCTACAACACGTCGAAG
CCGAGAAAGATATCACGGGTATCGATTACAAGACGATCCACTTCTTCGGT
GACAAGACATTCCCCGGTGGTAATGACTACGAGATCTACAGTGACCCTAG
GACGATCGGTCACTCCGTTGAGGACCCTGATGACACCATGAGGCAGTTGA
GGGAGCTCTTCCAGCTCTAGGTATGATAAGATTCACAACATCCGCCGAGA
CCTTGTAGATGCGCTCAAGAAGGAGTTCCCTCACTATGGTCTAAGGTCGG
TGGCTCGAATCTTCCCAAGCAGCAAGAACAGCTCGGTAGAAACACTACGG
ACGTCACAACCCTATTCGATTTCTGCTTCGCTGAGAACGGATTGACCGCT
TTCCGCCTGGGCAAACCTCTTCGCAGCAACAGCTTCATCCAATGGCTGGG
AGAGGAGAAGTACCAGAAGTTGGTCAACTTCTTGCTCAAGTACATCGCCA
ACTTGGAGATTCCTAAGAAGCGCGGCACCTTCGTTGAATTCCGCAATGGT
ATGATCAACGTCAGCCCGATTGGCAGGAATGCCAGCACCGAGGAGCGGAA
GGAATTTGAAGCAATGTTACCCCGGAGATGCTCACGCTTCTCTCTCAGCT
GCGTCACAAGTGCGCGATCGGATTCATGGCCACCGAAGCAGCCGGCGTTT
ATCCTGCCCTGCAGGACCGCCCCCTCAAGGGCACAATCTGTCTCTTCGAT
GTCGACAAGACGCTAACGCCTGCCAGAGCTCTACTCTATTGGTGGTGAAA
TTTCTTTTGACGTTTTCCCGACCGGCTGGGACAAGACTTACTGCCTACAA
CACGTCGAAGCCGAGAAAGATATCACGGGTATCGATTACAAGACGATCCA
CTTCTTCGGTGACAAGACATTCCCCGGTGGTAATGACTACGAGATCTACA
GTGACCCTAGGACGATCGGTCACTCCGTTGAGGACCCTGATGACACCATG
AGGCAGTTGAGGGAGCTCTTCCAGCTCTAGGTATGATAAGATTCACAACA
TCCGCCGAGACCTTGTAGATGCGCTCAAGAAGGAGTTCCCTCACTATGGT
CTAAGGTCGGTGGCTCGAATCTTCCCAAGCAGCAAGAACAGCTCGGTAGA
AACACTACGGACGTCACAACCCTATTCGATTTCTGCTTCGCTGAGAACGG
ATTGACCGCTTTCCGCCTGGGCAAACCTCTTCGCAGCAACAGCTTCATCC
AATGGCTGGGAGAGGAGAAGTACCAGAAGTTGGTCAACTTCTTGCTCAAG
TACATCGCCAACTTGGAGATTCCTAAGAAGCGCGGCACCTTCGTTGAATT
CCGCAATGGTATGATCAACGTCAGCCCGATTGGCAGGAATGCCAGCACCG
AGGAGCGGAAGGAATTTGAAGCAATGTTACCCCGGAGATGCTCACGCTTC
TCTCTCAGCTGCGTCACAAGTGCGCGATCGGATTCATGGCCACCGAAGCA
GCCGGCGTTTATCCTGCCCTGCAGGACCGCCCCCTCAAGGGCACAATCTG
TCTCTTCGATGTCGACAAGACGCTAACGCCTGCCAGAGCTCTACTCTATT
GGTGGTGAAATTTCTTTTGACGTTTTCCCGACCGGCTGGGACAAGACTTA
CTGCCTACAACACGTCGAAGCCGAGAAAGATATCACGGGTATCGATTACA
AGACGATCCACTTCTTCGGTGACAAGACATTCCCCGGTGGTAATGACTAC
GAGATCTACAGTGACCCTAGGACGATCGGTCACTCCGTTGAGGACCCTGA
TGACACCATGAGGCAGTTGAGGGAGCTCTTCCAGCTCTAGGTATGATAAG
ATTCACAACATCCGCCGAGACCTTGTAGATGCGCTCAAGAAGGAGTTCCC
TCACTATGGTCTAAGGTCGGTGGCTCGAATCTTCCCAAGCAGCAAGAACA
GCTCGGTAGAAACACTACGGACGTCACAACCCTATTCGATTTCTGCTTCG
CTGAGAACGGATTGACCGCTTTCCGCCTGGGCAAACCTCTTCGCAGCAAC
AGCTTCATCCAATGGCTGGGAGAGGAGAAGTACCAGAAGTTGGTCAACTT
CTTGCTCAAGTACATCGCCAACTTGGAGATTCCTAAGAAGCGCGGCACCT
TCGTTGAATTCCGCAATGGTATGATCAACGTCAGCCCGATTGGCAGGAAT
GCCAGCACCGAGGAGCGGAAGGAATTTGAAGCAATGTTACCCCGGAGATG
CTCACGCTTCTCTCTCAGCTGCGTCACAAGTGCGCGATCGGATTCATGGC
CACCGAAGCAGCCGGCGTTTATCCTGCCCTGCAGGACCGCCCCCTCAAGG
GCACAATCTGTCTCTTCGATGTCGACAAGACGCTAACGCCTGCCAGAGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009298GDP-mannose biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004615phosphomannomutase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMM1ATCC64974_106670Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106670-T1ATCC64974_106670-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106670-T1.cdsATCC64974_106670-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106670-T1.exon5ATCC64974_106670-T1.exon5Aspergillus niger N402exon
ATCC64974_106670-T1.exon4ATCC64974_106670-T1.exon4Aspergillus niger N402exon
ATCC64974_106670-T1.exon3ATCC64974_106670-T1.exon3Aspergillus niger N402exon
ATCC64974_106670-T1.exon2ATCC64974_106670-T1.exon2Aspergillus niger N402exon
ATCC64974_106670-T1.exon1ATCC64974_106670-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263YFH
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR005002
DBxrefInterPro:IPR006379
DBxrefInterPro:IPR023214
DBxrefPFAM:PF03332
ProductPhosphomannomutase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3480282..3481372 -
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