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ATCC64974_106680-T1, ATCC64974_106680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106680-T1
Unique NameATCC64974_106680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3481933..3482765-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106680-T1 ID=ATCC64974_106680-T1|Name=ATCC64974_106680-T1|organism=Aspergillus niger N402|type=mRNA|length=833bp|location=Sequence derived from alignment at OGUI01000017.1:3481933..3482765- (Aspergillus niger N402)
ATGCCTAGTAAGTGCACACAAACGTGCTTTATGGTTCTAACGGATGAACT
GACTGTGGATAGAACAACGCGATTATTGTACGGGATGCCAACGTCTAGAT
ACTGTATAGAAAGTGCTGTAACTAACGAAGGCTGAATATAGACAAGATAC
TGGGAGTGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGCATACAAA
AGGTGAGTCAGTATTCATCAAGGTGCAACTATGCTCAGTTCTGAACCGTG
CAGGGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATTCACCAG
AGAGGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCTTATTAC
ACGTTGTCAGATGTATCACGCCGACGGGAGTATGATGCGATGAGGATGGC
AGGCGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTGCAGGAG
GATTCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAGCAACGC
GCATCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGAAGAGGG
CCTAGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCACACCCGA
CGTCTCGGTTCTGGTCCGTTATAGGTGGAATTAGTGGTGGTGCTCTCGGT
TTTATCGTAGCCAATGCTCCTGGAGCATTGGCTGGCGCAGTTGCTGGCAA
TCGTCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACGATGTCT
TCCTCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAATTAGCA
GCCAAGGTTTTTCAGACGACTATGGGCCGCTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3481933..3482765-

>ATCC64974_106680-T1 ID=ATCC64974_106680-T1|Name=ATCC64974_106680-T1|organism=Aspergillus niger N402|type=CDS|length=2652bp|location=Sequence derived from alignment at OGUI01000017.1:3481933..3482765- (Aspergillus niger N402)
GGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATTCACCAGAGA
GGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCTTATTACACG
TTGTCAGATGTATCACGCCGACGGGAGTATGATGCGATGAGGATGGCAGG
CGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTGCAGGAGGAT
TCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAGCAACGCGCA
TCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGAAGAGGGCCT
AGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCACACCCGACGT
CTCGGTTCTGGTCCGTTATAGGTGGAATTAGTGGTGGTGCTCTCGGTTTT
ATCGTAGCCAATGCTCCTGGAGCATTGGCTGGCGCAGTTGCTGGCAATCG
TCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACGATGTCTTCC
TCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAATTAGCAGCC
AAGGTTTTTCAGACGACTATGGGCCGCTGAACAAGATACTGGGAGTGTCT
CCCAAAGCAACACAACAAGAAATTCGCAATGCATACAAAAGAACAACGCG
ATTATTATGCCTAGGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTC
GATTCACCAGAGAGGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGA
TGCTTATTACACGTTGTCAGATGTATCACGCCGACGGGAGTATGATGCGA
TGAGGATGGCAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGA
GGTGCAGGAGGATTCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAG
TGAGCAACGCGCATCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGC
GTGAAGAGGGCCTAGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGT
TCACACCCGACGTCTCGGTTCTGGTCCGTTATAGGTGGAATTAGTGGTGG
TGCTCTCGGTTTTATCGTAGCCAATGCTCCTGGAGCATTGGCTGGCGCAG
TTGCTGGCAATCGTCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTT
TACGATGTCTTCCTCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAG
TGAATTAGCAGCCAAGGTTTTTCAGACGACTATGGGCCGCTGAACAAGAT
ACTGGGAGTGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGCATACA
AAAGAACAACGCGATTATTATGCCTAGGAATCCCTGAAGTCTCATCCAGA
CAGAGTTCCTGTCGATTCACCAGAGAGGGCGGCTCGGACACGCAAGTTCC
AGGAGATTAGCGATGCTTATTACACGTTGTCAGATGTATCACGCCGACGG
GAGTATGATGCGATGAGGATGGCAGGCGGTGTCGAGGAGGAAGAGGAGGA
AGTACCCCGTGGAGGTGCAGGAGGATTCCCCTGGTCTGCTTTTGGCTTTG
GCACGGCCGATAGTGAGCAACGCGCATCCGAGCAATTCGGGTCGGTGTTT
GAAGAAATGCTGCGTGAAGAGGGCCTAGCCAGCGAAGGCACAGATGCTGA
CGGTCAGACTCGTTCACACCCGACGTCTCGGTTCTGGTCCGTTATAGGTG
GAATTAGTGGTGGTGCTCTCGGTTTTATCGTAGCCAATGCTCCTGGAGCA
TTGGCTGGCGCAGTTGCTGGCAATCGTCTTGGTGCAGTGCGAGATGCCAA
AGGAAAGAGTGTTTACGATGTCTTCCTCCAGCTTCCTCAGACCGATCGTG
CACGGCTTTTGAGTGAATTAGCAGCCAAGGTTTTTCAGACGACTATGGGC
CGCTGAACAAGATACTGGGAGTGTCTCCCAAAGCAACACAACAAGAAATT
CGCAATGCATACAAAAGAACAACGCGATTATTATGCCTAGGAATCCCTGA
AGTCTCATCCAGACAGAGTTCCTGTCGATTCACCAGAGAGGGCGGCTCGG
ACACGCAAGTTCCAGGAGATTAGCGATGCTTATTACACGTTGTCAGATGT
ATCACGCCGACGGGAGTATGATGCGATGAGGATGGCAGGCGGTGTCGAGG
AGGAAGAGGAGGAAGTACCCCGTGGAGGTGCAGGAGGATTCCCCTGGTCT
GCTTTTGGCTTTGGCACGGCCGATAGTGAGCAACGCGCATCCGAGCAATT
CGGGTCGGTGTTTGAAGAAATGCTGCGTGAAGAGGGCCTAGCCAGCGAAG
GCACAGATGCTGACGGTCAGACTCGTTCACACCCGACGTCTCGGTTCTGG
TCCGTTATAGGTGGAATTAGTGGTGGTGCTCTCGGTTTTATCGTAGCCAA
TGCTCCTGGAGCATTGGCTGGCGCAGTTGCTGGCAATCGTCTTGGTGCAG
TGCGAGATGCCAAAGGAAAGAGTGTTTACGATGTCTTCCTCCAGCTTCCT
CAGACCGATCGTGCACGGCTTTTGAGTGAATTAGCAGCCAAGGTTTTTCA
GACGACTATGGGCCGCTGAACAAGATACTGGGAGTGTCTCCCAAAGCAAC
ACAACAAGAAATTCGCAATGCATACAAAAGAACAACGCGATTATTATGCC
TA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106680ATCC64974_106680Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106680-T1ATCC64974_106680-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106680-T1.cdsATCC64974_106680-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106680-T1.exon4ATCC64974_106680-T1.exon4Aspergillus niger N402exon
ATCC64974_106680-T1.exon3ATCC64974_106680-T1.exon3Aspergillus niger N402exon
ATCC64974_106680-T1.exon2ATCC64974_106680-T1.exon2Aspergillus niger N402exon
ATCC64974_106680-T1.exon1ATCC64974_106680-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3481933..3482765 -
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