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ATCC64974_106850-T1, ATCC64974_106850-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106850-T1
Unique NameATCC64974_106850-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3525065..3526111-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106850-T1 ID=ATCC64974_106850-T1|Name=ATCC64974_106850-T1|organism=Aspergillus niger N402|type=mRNA|length=1047bp|location=Sequence derived from alignment at OGUI01000017.1:3525065..3526111- (Aspergillus niger N402)
ATGGCTCCTTCAAAGTGGGGTATGTCCTCTTTTGGAGATTTTTGTGGCCC
TCGCCCGCAATAGGGACATACATTGCGGGACAACATGGCGAATCATTCAC
GATACTGACGGCTTCTTTCAGATGACGAAGAAGAGAGTGTCTCTCCCCCT
CCTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTGAG
TTTTTGCCGCCCCTCCCCCCTCCTTTTCCATTTTTGCCTCACAATTTGCC
CCGCGCTGTTTCTCTTGGCCTCAGTCGCTGAAAACTCGCGCCCCCCCCCC
CCCCCCCCCCCCCCCCCACGATCTGACCGAATGAACTAGGTCCTCGACTC
CTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCGCCAAGG
CAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAACAAGAAG
AGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCAGATGC
CGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGCGGAGAG
CCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCCGAGGAC
CTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGCCCCCAA
GGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCGATCTGT
CGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCCGCGTT
ACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCCCAGTA
TGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCTGCCCA
GCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCAATGAG
AAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACCAAGGC
GGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGATTGAAA
CCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATGTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3525065..3526111-

>ATCC64974_106850-T1 ID=ATCC64974_106850-T1|Name=ATCC64974_106850-T1|organism=Aspergillus niger N402|type=CDS|length=2403bp|location=Sequence derived from alignment at OGUI01000017.1:3525065..3526111- (Aspergillus niger N402)
GTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAA
GGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCG
CCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGG
AAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGC
CGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGC
ACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGC
AGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGC
CGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGT
TCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAG
AAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAA
GGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTC
TCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAG
AAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAA
CAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACT
TCATGTGAATGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCCC
GCCGCAAGTTCGACGACGAGGAAGAGGAAGATATGGCTCCTTCAAAGTGG
GGTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGA
AGGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCC
GCCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCG
GAAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGG
CCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAG
CACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCG
CAGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGG
CCGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAG
TTCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAA
GAAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCA
AGGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACT
CTCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAA
GAAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGA
ACAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGAC
TTCATGTGAATGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCC
CGCCGCAAGTTCGACGACGAGGAAGAGGAAGATATGGCTCCTTCAAAGTG
GGGTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAG
AAGGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGC
CGCCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGC
GGAAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAG
GCCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAA
GCACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACC
GCAGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAG
GCCGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCA
GTTCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGA
AGAAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTC
AAGGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTAC
TCTCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACA
AGAAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAG
AACAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGA
CTTCATGTGAATGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGC
CCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATATGGCTCCTTCAAAGT
GGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HCR1ATCC64974_106850Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106850-T1ATCC64974_106850-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106850-T1.cdsATCC64974_106850-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106850-T1.exon3ATCC64974_106850-T1.exon3Aspergillus niger N402exon
ATCC64974_106850-T1.exon2ATCC64974_106850-T1.exon2Aspergillus niger N402exon
ATCC64974_106850-T1.exon1ATCC64974_106850-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR023194
DBxrefInterPro:IPR013906
DBxrefPFAM:PF08597
ProductTranslation initiation factor 3 subunit J component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3525065..3526111 -
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