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ATCC64974_106870-T1, ATCC64974_106870-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106870-T1
Unique NameATCC64974_106870-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3529813..3531222+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106870-T1 ID=ATCC64974_106870-T1|Name=ATCC64974_106870-T1|organism=Aspergillus niger N402|type=mRNA|length=1410bp|location=Sequence derived from alignment at OGUI01000017.1:3529813..3531222+ (Aspergillus niger N402)
ATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAA
GAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTC
GCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCTGAAGAGAAC
ATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCA
GCTGGATGAGGAGAGATGTATGTTCATCCCTATTTCTCCCCAATATAACC
TCGACTCCGGGCAGATCCTTGTCCATCGTCTGTCGTTCTCTTTGCCGGTA
TGTGGCTGACCTGATCCAGTCATTGTCAAGGCATCATCCGGACCGCGTTA
TGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCA
CCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCG
AGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCA
GATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCC
GAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTA
GGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGG
AAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCC
TGAAAGGTATACATAATCAACTCCGGGCGCGGGCTTAGGTAGGCCTAGAT
CGCTAACTTCATCCTAGTTGTCTCGTCCGCTATTGTCGACAAATACATCG
GTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACAC
GAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGACG
TTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGG
AGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATC
ATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGC
GGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTC
GCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAG
ATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGA
TCTTCGCAACGTCGTTACGGAAGCGTATGTCTATTTCCCGTTGTTGCTCT
GCCATTTTTATTACATGACTAGGACTAATTCGGAGACAGTGGTCTATTTG
CTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAACAGAGCG
GTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCA
GAAGTTGTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3529813..3531222+

>ATCC64974_106870-T1 ID=ATCC64974_106870-T1|Name=ATCC64974_106870-T1|organism=Aspergillus niger N402|type=CDS|length=4728bp|location=Sequence derived from alignment at OGUI01000017.1:3529813..3531222+ (Aspergillus niger N402)
ATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAA
GAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTC
GCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCTGAAGAGAAC
ATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCA
GCTGGATGAGGAGAGATTCATTGTCAAGGCATCATCCGGACCGCGTTATG
TCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACC
CGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCGAG
AGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCAGA
TCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCCGA
GAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGG
AATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAA
AGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCCTG
AAAGTTGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCGCG
GTTAATAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCA
TCTTCATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGT
ACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCA
GCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGA
ATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGCGGGTCGTCTCGAC
CGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTT
GAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGA
GTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTC
GTTACGGAAGCTGGTCTATTTGCTATCAAGGATTACCGGGACGCGATCAA
CCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGC
TGGAGGGCAAGCTGGAATACCAGAAGTTGTAGATGAACGGCGCCAGCGAT
CCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAGGAGCCTGCTCGAGCT
CCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCATGGGGATCAAGGATT
TGCAACGAGAGTTCGATATCTCTGAAGAGAACATCAAGGCGCTGCAAAGC
GTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCTGGATGAGGAGAGATT
CATTGTCAAGGCATCATCCGGACCGCGTTATGTCGTCGGTTGCCGCTCGA
AGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTGTCGCCCTCGATATG
ACCACACTTACTATAATGAGAATGCTCCCGAGAGAGGTTGATCCGTTGGT
ATACAACATGTCACTGGAGGACCCAGGCCAGATCAACTTTGCAGGCATTG
GTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAGTTATCGAGTTGCCG
CTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATCAAGCCGCCCAAGGG
TGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGACGTTGTTGGCACGAG
CAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAGTTGTCTCGTCCGCT
ATTGTCGACAAATACATCGGTGAATCTGCGCGGTTAATAAGAGAGATGTT
CGGATACGCCAAAGAACACGAGCCTTGCATCATCTTCATGGACGAAATCG
ACGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTTCGGCTGATCGGGAA
ATCCAGCGTACATTGATGGAGCTTCTCAACCAGCTGGATGGTTTTGATTA
CCTTGGAAAGACGAAGATCATCATGGCCACGAATCGGCCTGATACGCTTG
ACCCGGCTCTGCTGCGAGCGGGTCGTCTCGACCGCAAGATCGAGATTCCC
CTGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAGATCCACTCCAGCAC
CGTTCAACTGGATGGCGAGATTGACTTCGAGAGTGTGGTGAAGATGAGTG
ACGGACTCAACGGTGCTGATCTTCGCAACGTCGTTACGGAAGCTGGTCTA
TTTGCTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAACAG
AGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAAT
ACCAGAAGTTGTAGATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCG
CTCGAGGATTACAAGAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAA
GCTCAAGTCTCTTCGCATGGGGATCAAGGATTTGCAACGAGAGTTCGATA
TCTCTGAAGAGAACATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGA
GAAGTGTTGAAGCAGCTGGATGAGGAGAGATTCATTGTCAAGGCATCATC
CGGACCGCGTTATGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGC
TAAAGCAGGGCACCCGTGTCGCCCTCGATATGACCACACTTACTATAATG
AGAATGCTCCCGAGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGA
GGACCCAGGCCAGATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGA
TCCGCGAGCTCCGAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTT
TTCCAAAGAGTAGGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCC
TCCGGGTACCGGAAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGG
AGACCAACTTCCTGAAAGTTGTCTCGTCCGCTATTGTCGACAAATACATC
GGTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACA
CGAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGAC
GTTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATG
GAGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGAT
CATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAG
CGGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGT
CGCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGA
GATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTG
ATCTTCGCAACGTCGTTACGGAAGCTGGTCTATTTGCTATCAAGGATTAC
CGGGACGCGATCAACCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGC
TGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCAGAAGTTGTAGATGA
ACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAGG
AGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCAT
GGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCTGAAGAGAACATCA
AGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCTG
GATGAGGAGAGATTCATTGTCAAGGCATCATCCGGACCGCGTTATGTCGT
CGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTG
TCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCGAGAGAG
GTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCAGATCAA
CTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAG
TTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATC
AAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGAC
GTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAG
TTGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCGCGGTTA
ATAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCATCTT
CATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTT
CGGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCAGCTG
GATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGAATCG
GCCTGATACGCTTGACCCGGCTCTGCTGCGAGCGGGTCGTCTCGACCGCA
AGATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAG
ATCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGAGTGT
GGTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTCGTTA
CGGAAGCTGGTCTATTTGCTATCAAGGATTACCGGGACGCGATCAACCAG
GATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGA
GGGCAAGCTGGAATACCAGAAGTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT4ATCC64974_106870Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106870-T1.exon1ATCC64974_106870-T1.exon1Aspergillus niger N402exon
ATCC64974_106870-T1.exon2ATCC64974_106870-T1.exon2Aspergillus niger N402exon
ATCC64974_106870-T1.exon3ATCC64974_106870-T1.exon3Aspergillus niger N402exon
ATCC64974_106870-T1.exon4ATCC64974_106870-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106870-T1.cdsATCC64974_106870-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106870-T1ATCC64974_106870-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S proteasome subunit rpt4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3529813..3531222 +
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