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ATCC64974_106920-T1, ATCC64974_106920-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106920-T1
Unique NameATCC64974_106920-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3545643..3546542-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106920-T1 ID=ATCC64974_106920-T1|Name=ATCC64974_106920-T1|organism=Aspergillus niger N402|type=mRNA|length=900bp|location=Sequence derived from alignment at OGUI01000017.1:3545643..3546542- (Aspergillus niger N402)
ATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCGCGCACCAGCATCATGA
GCTTCTTCAACAGCTGGCCGGGTTGACGGCCATGCAACCCCGTCACCGCC
TGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAAGCCAGGCTTGACCAAC
ACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTGTCGAATTGCAGCGCCT
TAATAAGATGCTCAATGGAGGCATGTTCTATACCCAAGTAGTCGGTCCCG
TGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTCGTCGGGAGATCCAGAT
GTCTCCATGTCCGGATTGGAGGAGAAGCCATCGTCATCTTCGTCTTCTTA
CAGTTATGAGGATCAGCCCTGGAAACTCGAATTTAGAGATATCCCCGAGG
CAGGCACTCGATCCGCGGTAACTGCTCGGCTGATGGCTAGTGCCACGCTG
CCTAAAGGTGATATCACGGCGCCCATGAATGCCTGGGGTTATAGGTTAGT
AGCTTCCCATGCCATTCGGTGTTATATCAGCTCCTCCATATCTTGATTGG
TCCTAGTCGGCTGACAAACTGGGTTCAGCTTTGTCACTGAGTACGTGGTG
GAAGGAGATGTCTTTGTTCTCAATGACATCGTTATCTTCCTACACCGTGT
CCTGCTTTACCCGACTGGGGCGCAGGAATCACATGGACCTCGTCGGCAGC
TGCCTGCGTATCAGGAGCTCTCACCGCTGGAACGGACAGGGAGCTATGTC
CTGCAAGCTGCTATCACCGTCCAGGATGGCGGGAATCAGGAGATGATGAG
GACGGCTTCGCAGCATTTGTTCGGGCTTCGCGAGCAGCTCAAGTCGGCTG
TCCGTCTAGAAATGGCGGACCGGCTGTCTCTGGATACGCGAGCGAAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3545643..3546542-

>ATCC64974_106920-T1 ID=ATCC64974_106920-T1|Name=ATCC64974_106920-T1|organism=Aspergillus niger N402|type=CDS|length=1632bp|location=Sequence derived from alignment at OGUI01000017.1:3545643..3546542- (Aspergillus niger N402)
CTTTGTCACTGAGTACGTGGTGGAAGGAGATGTCTTTGTTCTCAATGACA
TCGTTATCTTCCTACACCGTGTCCTGCTTTACCCGACTGGGGCGCAGGAA
TCACATGGACCTCGTCGGCAGCTGCCTGCGTATCAGGAGCTCTCACCGCT
GGAACGGACAGGGAGCTATGTCCTGCAAGCTGCTATCACCGTCCAGGATG
GCGGGAATCAGGAGATGATGAGGACGGCTTCGCAGCATTTGTTCGGGCTT
CGCGAGCAGCTCAAGTCGGCTGTCCGTCTAGAAATGGCGGACCGGCTGTC
TCTGGATACGCGAGCGAAGTAAATGCATGAGCTTCTGCTCTTCGCCTCGG
TTCCCGCGCACCAGCATCATGAGCTTCTTCAACAGCTGGCCGGGTTGACG
GCCATGCAACCCCGTCACCGCCTGGAAAGACGCTTGGTTTTCAAGGCCTA
CCGCAAGCCAGGCTTGACCAACACCCGGGTTGGGGCCAGTCAAGATCTGC
AGGGTGTCGAATTGCAGCGCCTTAATAAGATGCTCAATGGAGGCATGTTC
TATACCCAAGTAGTCGGTCCCGTGGCCAAAGCCGACTTTGGCGGGAACCC
TTCCTCGTCGGGAGATCCAGATGTCTCCATGTCCGGATTGGAGGAGAAGC
CATCGTCATCTTCGTCTTCTTACAGTTATGAGGATCAGCCCTGGAAACTC
GAATTTAGAGATATCCCCGAGGCAGGCACTCGATCCGCGGTAACTGCTCG
GCTGATGGCTAGTGCCACGCTGCCTAAAGGTGATATCACGGCGCCCATGA
ATGCCTGGGGTTATAGCTTTGTCACTGAGTACGTGGTGGAAGGAGATGTC
TTTGTTCTCAATGACATCGTTATCTTCCTACACCGTGTCCTGCTTTACCC
GACTGGGGCGCAGGAATCACATGGACCTCGTCGGCAGCTGCCTGCGTATC
AGGAGCTCTCACCGCTGGAACGGACAGGGAGCTATGTCCTGCAAGCTGCT
ATCACCGTCCAGGATGGCGGGAATCAGGAGATGATGAGGACGGCTTCGCA
GCATTTGTTCGGGCTTCGCGAGCAGCTCAAGTCGGCTGTCCGTCTAGAAA
TGGCGGACCGGCTGTCTCTGGATACGCGAGCGAAGTAAATGCATGAGCTT
CTGCTCTTCGCCTCGGTTCCCGCGCACCAGCATCATGAGCTTCTTCAACA
GCTGGCCGGGTTGACGGCCATGCAACCCCGTCACCGCCTGGAAAGACGCT
TGGTTTTCAAGGCCTACCGCAAGCCAGGCTTGACCAACACCCGGGTTGGG
GCCAGTCAAGATCTGCAGGGTGTCGAATTGCAGCGCCTTAATAAGATGCT
CAATGGAGGCATGTTCTATACCCAAGTAGTCGGTCCCGTGGCCAAAGCCG
ACTTTGGCGGGAACCCTTCCTCGTCGGGAGATCCAGATGTCTCCATGTCC
GGATTGGAGGAGAAGCCATCGTCATCTTCGTCTTCTTACAGTTATGAGGA
TCAGCCCTGGAAACTCGAATTTAGAGATATCCCCGAGGCAGGCACTCGAT
CCGCGGTAACTGCTCGGCTGATGGCTAGTGCCACGCTGCCTAAAGGTGAT
ATCACGGCGCCCATGAATGCCTGGGGTTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SRB5ATCC64974_106920Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106920-T1ATCC64974_106920-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106920-T1.cdsATCC64974_106920-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106920-T1.exon2ATCC64974_106920-T1.exon2Aspergillus niger N402exon
ATCC64974_106920-T1.exon1ATCC64974_106920-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR019095
DBxrefPFAM:PF09637
ProductMediator of RNA polymerase II transcription subunit 18
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3545643..3546542 -
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