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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3577939..3578878+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_106990-T1 ID=ATCC64974_106990-T1|Name=ATCC64974_106990-T1|organism=Aspergillus niger N402|type=mRNA|length=940bp|location=Sequence derived from alignment at OGUI01000017.1:3577939..3578878+ (Aspergillus niger N402)
ATGGCTGAAATCCGCCGCAAGCTCGTCATCGTGGGCGATGGTGCCTGCGG
TAAGACTTGTCTTTTGATGTGAGTACCCTCCCCTTCTTCCATTCTTTGCT
GGGTAGGGATCAAACAGCGAACTGACCTTGGCTTCTTCTTCGACCAGTGT
CTTCTCCAAGGGTACCTTCCCTGAGGTTAGCTTCCACCGACCCTCCTGGC
CTGATCCCTAATGCCGTCTTTCCAACCCCCCCATCGTCAATCCGAGTTAT
CTGGATAGCCTTCCGGTCAAACACTCCGCTTCTATCAAACTGACCCTATC
ACGCTTTAGGTGTACGTCCCTACTGTGTTCGAGAATTACGTCGCCGACGT
AGAGGTCGATGGCAAGCACGTCGAGCTTGCCCTTTGGGATACGGCTGGTC
AGGAAGATTACGACCGTCTCCGTCCCCTCTCATACCCTGACTCCCATGTC
ATCCTGATCTGTTTCGCGGTTGACTCTCCCGACTCCCTCGACAACGTCCA
GGAGAAGGTTAGTCCTCCGTCACATGCCTGGTCTCCTTGGCGGGCATATG
GGCAAAGAATCTGCCCTCCAGGTAACTAACATGATTACAGTGGATCTCTG
AAGTCCTTCACTTCTGCCAGGGACTTCCCATCATCCTCGTTGGCTGCAAG
ATGGATCTGCGCCATGACCCCAAGACCATTGAGGAGCTTCACAAGACCTC
CCAGAAGCCGGTTACCCCTGAGCAGGTATGTGGCACACGACCAAGAGGAT
GCATTATCCCTTGAGATAGCGGCTAATATGCGATTAGGGTGAGGAGGTTC
GCAAGAAGATCGGTGCTTACAAGTACCTTGAGTGCTCTGCGCGCACCAAC
GAGGGTGTCCGCGAGGTCTTTGAGGCTGCCACCCGGGCTGCCCTATTGAC
CAAGACCCACAAGAGCAAGAAGAAGTGCACCATCCTGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3577939..3578878+ >ATCC64974_106990-T1 ID=ATCC64974_106990-T1|Name=ATCC64974_106990-T1|organism=Aspergillus niger N402|type=CDS|length=2910bp|location=Sequence derived from alignment at OGUI01000017.1:3577939..3578878+ (Aspergillus niger N402)
ATGGCTGAAATCCGCCGCAAGCTCGTCATCGTGGGCGATGGTGCCTGCGG
TAAGACTTGTCTTTTGATTGTCTTCTCCAAGGGTACCTTCCCTGAGGTGT
ACGTCCCTACTGTGTTCGAGAATTACGTCGCCGACGTAGAGGTCGATGGC
AAGCACGTCGAGCTTGCCCTTTGGGATACGGCTGGTCAGGAAGATTACGA
CCGTCTCCGTCCCCTCTCATACCCTGACTCCCATGTCATCCTGATCTGTT
TCGCGGTTGACTCTCCCGACTCCCTCGACAACGTCCAGGAGAAGTGGATC
TCTGAAGTCCTTCACTTCTGCCAGGGACTTCCCATCATCCTCGTTGGCTG
CAAGATGGATCTGCGCCATGACCCCAAGACCATTGAGGAGCTTCACAAGA
CCTCCCAGAAGCCGGTTACCCCTGAGCAGGGTGAGGAGGTTCGCAAGAAG
ATCGGTGCTTACAAGTACCTTGAGTGCTCTGCGCGCACCAACGAGGGTGT
CCGCGAGGTCTTTGAGGCTGCCACCCGGGCTGCCCTATTGACCAAGACCC
ACAAGAGCAAGAAGAAGTGCACCATCCTGTAAATGGCTGAAATCCGCCGC
AAGCTCGTCATCGTGGGCGATGGTGCCTGCGGTAAGACTTGTCTTTTGAT
TGTCTTCTCCAAGGGTACCTTCCCTGAGGTGTACGTCCCTACTGTGTTCG
AGAATTACGTCGCCGACGTAGAGGTCGATGGCAAGCACGTCGAGCTTGCC
CTTTGGGATACGGCTGGTCAGGAAGATTACGACCGTCTCCGTCCCCTCTC
ATACCCTGACTCCCATGTCATCCTGATCTGTTTCGCGGTTGACTCTCCCG
ACTCCCTCGACAACGTCCAGGAGAAGTGGATCTCTGAAGTCCTTCACTTC
TGCCAGGGACTTCCCATCATCCTCGTTGGCTGCAAGATGGATCTGCGCCA
TGACCCCAAGACCATTGAGGAGCTTCACAAGACCTCCCAGAAGCCGGTTA
CCCCTGAGCAGGGTGAGGAGGTTCGCAAGAAGATCGGTGCTTACAAGTAC
CTTGAGTGCTCTGCGCGCACCAACGAGGGTGTCCGCGAGGTCTTTGAGGC
TGCCACCCGGGCTGCCCTATTGACCAAGACCCACAAGAGCAAGAAGAAGT
GCACCATCCTGTAAATGGCTGAAATCCGCCGCAAGCTCGTCATCGTGGGC
GATGGTGCCTGCGGTAAGACTTGTCTTTTGATTGTCTTCTCCAAGGGTAC
CTTCCCTGAGGTGTACGTCCCTACTGTGTTCGAGAATTACGTCGCCGACG
TAGAGGTCGATGGCAAGCACGTCGAGCTTGCCCTTTGGGATACGGCTGGT
CAGGAAGATTACGACCGTCTCCGTCCCCTCTCATACCCTGACTCCCATGT
CATCCTGATCTGTTTCGCGGTTGACTCTCCCGACTCCCTCGACAACGTCC
AGGAGAAGTGGATCTCTGAAGTCCTTCACTTCTGCCAGGGACTTCCCATC
ATCCTCGTTGGCTGCAAGATGGATCTGCGCCATGACCCCAAGACCATTGA
GGAGCTTCACAAGACCTCCCAGAAGCCGGTTACCCCTGAGCAGGGTGAGG
AGGTTCGCAAGAAGATCGGTGCTTACAAGTACCTTGAGTGCTCTGCGCGC
ACCAACGAGGGTGTCCGCGAGGTCTTTGAGGCTGCCACCCGGGCTGCCCT
ATTGACCAAGACCCACAAGAGCAAGAAGAAGTGCACCATCCTGTAAATGG
CTGAAATCCGCCGCAAGCTCGTCATCGTGGGCGATGGTGCCTGCGGTAAG
ACTTGTCTTTTGATTGTCTTCTCCAAGGGTACCTTCCCTGAGGTGTACGT
CCCTACTGTGTTCGAGAATTACGTCGCCGACGTAGAGGTCGATGGCAAGC
ACGTCGAGCTTGCCCTTTGGGATACGGCTGGTCAGGAAGATTACGACCGT
CTCCGTCCCCTCTCATACCCTGACTCCCATGTCATCCTGATCTGTTTCGC
GGTTGACTCTCCCGACTCCCTCGACAACGTCCAGGAGAAGTGGATCTCTG
AAGTCCTTCACTTCTGCCAGGGACTTCCCATCATCCTCGTTGGCTGCAAG
ATGGATCTGCGCCATGACCCCAAGACCATTGAGGAGCTTCACAAGACCTC
CCAGAAGCCGGTTACCCCTGAGCAGGGTGAGGAGGTTCGCAAGAAGATCG
GTGCTTACAAGTACCTTGAGTGCTCTGCGCGCACCAACGAGGGTGTCCGC
GAGGTCTTTGAGGCTGCCACCCGGGCTGCCCTATTGACCAAGACCCACAA
GAGCAAGAAGAAGTGCACCATCCTGTAAATGGCTGAAATCCGCCGCAAGC
TCGTCATCGTGGGCGATGGTGCCTGCGGTAAGACTTGTCTTTTGATTGTC
TTCTCCAAGGGTACCTTCCCTGAGGTGTACGTCCCTACTGTGTTCGAGAA
TTACGTCGCCGACGTAGAGGTCGATGGCAAGCACGTCGAGCTTGCCCTTT
GGGATACGGCTGGTCAGGAAGATTACGACCGTCTCCGTCCCCTCTCATAC
CCTGACTCCCATGTCATCCTGATCTGTTTCGCGGTTGACTCTCCCGACTC
CCTCGACAACGTCCAGGAGAAGTGGATCTCTGAAGTCCTTCACTTCTGCC
AGGGACTTCCCATCATCCTCGTTGGCTGCAAGATGGATCTGCGCCATGAC
CCCAAGACCATTGAGGAGCTTCACAAGACCTCCCAGAAGCCGGTTACCCC
TGAGCAGGGTGAGGAGGTTCGCAAGAAGATCGGTGCTTACAAGTACCTTG
AGTGCTCTGCGCGCACCAACGAGGGTGTCCGCGAGGTCTTTGAGGCTGCC
ACCCGGGCTGCCCTATTGACCAAGACCCACAAGAGCAAGAAGAAGTGCAC
CATCCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_106990-T1 | ATCC64974_106990-T1-protein | Aspergillus niger N402 | polypeptide |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003578 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR001806 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF00025 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3577939..3578878 + |
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