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ATCC64974_107060-T1, ATCC64974_107060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107060-T1
Unique NameATCC64974_107060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3593755..3595183+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107060-T1 ID=ATCC64974_107060-T1|Name=ATCC64974_107060-T1|organism=Aspergillus niger N402|type=mRNA|length=1429bp|location=Sequence derived from alignment at OGUI01000017.1:3593755..3595183+ (Aspergillus niger N402)
ATGTCGACGTGGGGTGATTACTTCCGGGTCACCACGTAAGTCTTCTGAGT
CAGCCCCAGTCTATGATGATGGTGACATCGCACACCATCACCACCACACA
GACATAAACACCTCTGTTCATATACGCCCACATACTAATCGCATTGTTTC
TCTTCTCAGTTATGGTGAATCGCACTGCCGCTCTGTCGGCTGCATCGTCG
ACGGCTGCCCCCCAGGAATGGAACTCACCGAGGACGACATCCAGCCCCAG
ATGACCCGCAGACGTCCCGGTCAGAGTGCTCTGACGACGCCTCGTAATGA
GAAGGACCGCGTTGAAATCCAGTCCGGAACGGAGTTTGGAGTTACCCTGG
GAACTCCGATTGGCATGATGGTGCGCAACGAAGACCAGAGACCCAAGGAC
TACGGCAACAGCACCATGGACCTGTACCCCCGCCCCAGTCACGCCGACTT
GACCTATCTGGAGAAGTACGGCGTCAAGGCCAGCAGCGGTGGTGGTCGCA
GTAGTGCCCGTGAGACGATTGGTGAGTGAACCGCTTATCCCCAGATGGAG
TCCCATTGACACAATTTTTCCCCGGTTTCAGGCCGTGTGGCTGCCGGTGC
CATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGAGATTGTCGCTT
TCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTACTCCCGAGCAC
CCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTCAAGACCATCAC
CCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCCCAACGCCGATG
CCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCGACAACCACGAC
AGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCT
GGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGC
TCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGC
TGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATCGTCTCCGATGT
CCCGACCCAACTCGGCCCCAACACCACCACCAAGCAGCGCCTCACCACCA
AGACCAACAACTCCGGTGGTATCCAGGGCGGTATCTCCAACGGTGCCGAC
ATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATTGGCCAGGCCCA
GAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGAAGCCAAGGGCC
GTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTGTCGAGGCCATG
TCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTACTCCCGCGAGAG
CGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCCCACTCGTCCCA
CTCTCGGCACCAACGGTCACAGCGCATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3593755..3595183+

>ATCC64974_107060-T1 ID=ATCC64974_107060-T1|Name=ATCC64974_107060-T1|organism=Aspergillus niger N402|type=CDS|length=3735bp|location=Sequence derived from alignment at OGUI01000017.1:3593755..3595183+ (Aspergillus niger N402)
ATGTCGACGTGGGGTGATTACTTCCGGGTCACCACTTATGGTGAATCGCA
CTGCCGCTCTGTCGGCTGCATCGTCGACGGCTGCCCCCCAGGAATGGAAC
TCACCGAGGACGACATCCAGCCCCAGATGACCCGCAGACGTCCCGGTCAG
AGTGCTCTGACGACGCCTCGTAATGAGAAGGACCGCGTTGAAATCCAGTC
CGGAACGGAGTTTGGAGTTACCCTGGGAACTCCGATTGGCATGATGGTGC
GCAACGAAGACCAGAGACCCAAGGACTACGGCAACAGCACCATGGACCTG
TACCCCCGCCCCAGTCACGCCGACTTGACCTATCTGGAGAAGTACGGCGT
CAAGGCCAGCAGCGGTGGTGGTCGCAGTAGTGCCCGTGAGACGATTGGCC
GTGTGGCTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGC
GTCGAGATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCC
TCCTACTCCCGAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACC
TCCTCAAGACCATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGC
TGCCCCAACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTT
CCGCGACAACCACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTA
ACGTCCCCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAG
CTCGCCCACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGG
CTCCGGTTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCT
TCATCGTCTCCGATGTCCCGACCCAACTCGGCCCCAACACCACCACCAAG
CAGCGCCTCACCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGGTAT
CTCCAACGGTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCA
CCATTGGCCAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATC
CTCGAAGCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCC
CATTGTCGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTC
AGTACTCCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACC
CTGCCCACTCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAAATGTC
GACGTGGGGTGATTACTTCCGGGTCACCACTTATGGTGAATCGCACTGCC
GCTCTGTCGGCTGCATCGTCGACGGCTGCCCCCCAGGAATGGAACTCACC
GAGGACGACATCCAGCCCCAGATGACCCGCAGACGTCCCGGTCAGAGTGC
TCTGACGACGCCTCGTAATGAGAAGGACCGCGTTGAAATCCAGTCCGGAA
CGGAGTTTGGAGTTACCCTGGGAACTCCGATTGGCATGATGGTGCGCAAC
GAAGACCAGAGACCCAAGGACTACGGCAACAGCACCATGGACCTGTACCC
CCGCCCCAGTCACGCCGACTTGACCTATCTGGAGAAGTACGGCGTCAAGG
CCAGCAGCGGTGGTGGTCGCAGTAGTGCCCGTGAGACGATTGGCCGTGTG
GCTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGA
GATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTA
CTCCCGAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTC
AAGACCATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCC
CAACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCG
ACAACCACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTC
CCCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGC
CCACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCG
GTTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATC
GTCTCCGATGTCCCGACCCAACTCGGCCCCAACACCACCACCAAGCAGCG
CCTCACCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGGTATCTCCA
ACGGTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATT
GGCCAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGA
AGCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTG
TCGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTAC
TCCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCC
CACTCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAAATGTCGACGT
GGGGTGATTACTTCCGGGTCACCACTTATGGTGAATCGCACTGCCGCTCT
GTCGGCTGCATCGTCGACGGCTGCCCCCCAGGAATGGAACTCACCGAGGA
CGACATCCAGCCCCAGATGACCCGCAGACGTCCCGGTCAGAGTGCTCTGA
CGACGCCTCGTAATGAGAAGGACCGCGTTGAAATCCAGTCCGGAACGGAG
TTTGGAGTTACCCTGGGAACTCCGATTGGCATGATGGTGCGCAACGAAGA
CCAGAGACCCAAGGACTACGGCAACAGCACCATGGACCTGTACCCCCGCC
CCAGTCACGCCGACTTGACCTATCTGGAGAAGTACGGCGTCAAGGCCAGC
AGCGGTGGTGGTCGCAGTAGTGCCCGTGAGACGATTGGCCGTGTGGCTGC
CGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGAGATTG
TCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTACTCCC
GAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTCAAGAC
CATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCCCAACG
CCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCGACAAC
CACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGT
CGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACG
CCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCGGTTTC
GGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATCGTCTC
CGATGTCCCGACCCAACTCGGCCCCAACACCACCACCAAGCAGCGCCTCA
CCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGGTATCTCCAACGGT
GCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATTGGCCA
GGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGAAGCCA
AGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTGTCGAG
GCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTACTCCCG
CGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCCCACTC
GTCCCACTCTCGGCACCAACGGTCACAGCGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009073aromatic amino acid family biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004107chorismate synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARO2ATCC64974_107060Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107060-T1.exon1ATCC64974_107060-T1.exon1Aspergillus niger N402exon
ATCC64974_107060-T1.exon2ATCC64974_107060-T1.exon2Aspergillus niger N402exon
ATCC64974_107060-T1.exon3ATCC64974_107060-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107060-T1.cdsATCC64974_107060-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107060-T1ATCC64974_107060-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262DUV
DBxrefInterPro:IPR020541
DBxrefInterPro:IPR000453
DBxrefInterPro:IPR035904
DBxrefPFAM:PF01264
Productbifunctional chorismate synthase/riboflavin reductase [NAD(P)H] aro2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3593755..3595183 +
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