You are here

Home

ATCC64974_107140-T1, ATCC64974_107140-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107140-T1
Unique NameATCC64974_107140-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3625879..3627801-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107140-T1 ID=ATCC64974_107140-T1|Name=ATCC64974_107140-T1|organism=Aspergillus niger N402|type=mRNA|length=1923bp|location=Sequence derived from alignment at OGUI01000017.1:3625879..3627801- (Aspergillus niger N402)
ATGCGTCGTGCGGCTTTTCAGGCCCTTCGTACTGCCCGTCGCGTGCCAGC
ATGGAAGGTCACTGGTAGGAAACCGTGCGCCGTGTCCTTCTCTAGCAGTC
GGAGTCTCGGTCTACGTGCTTCCTCCACGGGCAAACACCCCTCTTATCTC
TCCGCCCCCCTACAGTCGTCGATGCATCTTCGGAACTTCTCGCTCGCTGT
CATTTCGACCGTCGTCGCTTCGGGCGCCTGGTACGCTTATCAGGGCACCG
GCCAGACATCGGCGGGTCTGAACCCAACATCGTCGCAATTCCGTTCGTAT
TCGACCGCTGGTGCGCAAGCTGAAGCCCCTGCGGAGGCCACTCGACGTGC
GCTGCTGGTGGATAATGACCAGTTTTTTACCGCCCCTATTTCTGGAGATC
AGCCTTTATCCAAGCACACGGACGATTCCGACCGTCGAGTTCTCGAGATG
TTGACCCCGGAGCAGGCCACACAGAAGCTCAGGAAGAACGAAGAGTCATA
TTTGGTGAACCGGGGCAAGGGAGTGGTCCGTTATGATATTGTTCAGGTGC
CTAGTAATTCTCCGATCGAGGATGATCATGCCGAAAAGATCATTGAGGTG
CCGTCGTCCGTAGCGGCAGCCAATCAAGGCGAATCCAAGAGTGATTGGAT
GTTCTGGGCGGTGTTTGATGGCCATTCGTACGTCTACAGAATTCCATACG
ATCAAGCATCTTCCCCTTACTAACTTATGGTTTTTCAGAGGCTGGACAAC
ATCTGCCAAATTGCGCAATGTTCTCATCTCCTACGTCGCTCGTGAATTGA
ACACTACCTACAAAGCCGCAGCTGCAGACCCCTCTCTGTTGACGCCCTCG
TCCGCTGCCATAGACGCCGCGATCAAGCAAGGGTTCACTCGTTTGGACGA
CGATATCGTGCACAGCAGTGTCGACAAGGTGCTCAAGTCCAACTCCCGCC
GGGTCGCAGCCGAGATGCTTGCGCCTGCTCTTTCCGGATCTTGCGCTCTT
CTTGCTTTCTACGACTCTCAATCTAAGGATTTGAAGGTCGCCTGCGCAGG
TGACTCCAGAGCTGTTCTGGGTCGTCGCGCTGCGAACGGTAAATGGTCGG
CAACACCTCTTTCCGAAGACCAGACTGGTGGAACTCCGTCGGAGATGAAG
CGTCTACGGGAGGAGCATCCCGGGGAGCCCAACGTTGTGCGCAACGGACG
GATTCTCGGACAGCTTGAGCCGAGTCGCTCTTTTGGAGATGCTTTCTACA
AGTGGAGCAGGGATACGCAGGACAAGATCAAGCGACAGTTCTTTGGTCGC
ACTCCCCATCCCCTGTTGAAGACCCCTCCCTACGTGACTGCCGAGCCAAT
CATCACCACCACAAAGATGGACCCCGGCAGCGGTGACTTCCTCGTCCTCG
CAACCGACGGTCTCTGGGAGATGTTGAGCAACGAGGAAGTTGTCGGTCTT
GTTGGCCAGTGGGTTGAGCAGCAGCAGCAATTCGGCGCCAGTGGCAGCAA
CAAGGCCTGGCTGAAGAGCTGGTTTAGCTTTGGCAACAAGTCAGAGCTGC
CCGTGGAAGGGCCCAAGGAGACCGACGCTGAAGGCCAACGCCGTCCCATT
CGCCAGCAGCAATACGACATTGCTGGAGCAGCCAGCCGGTTCACTGTTGA
GGATCAAAACGCTGCGACTCACCTTGTGCGCAATGCCATGGGAGGAAAGG
ACAAGGAAATGGTCTCCGCCTTGCTCACACTTCCCAGTCCTTATTCTCGC
AGATACCGGTATGCTTCCTTCCCTACTTTATCTTTTCTAGGATCCCGCTA
ACTTCACCCAGTGACGACGTAACTGTCGAGGTTATCTTCTTCGGCGAGGG
CCCTGACAACCGCACCGTCACCATCAACGAAGAGGCCAGCGCATCCGAGG
AGAGCGTCAAGGCCAAGCTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3625879..3627801-

>ATCC64974_107140-T1 ID=ATCC64974_107140-T1|Name=ATCC64974_107140-T1|organism=Aspergillus niger N402|type=CDS|length=5427bp|location=Sequence derived from alignment at OGUI01000017.1:3625879..3627801- (Aspergillus niger N402)
TGACGACGTAACTGTCGAGGTTATCTTCTTCGGCGAGGGCCCTGACAACC
GCACCGTCACCATCAACGAAGAGGCCAGCGCATCCGAGGAGAGCGTCAAG
GCCAAGCTGTAGAGGCTGGACAACATCTGCCAAATTGCGCAATGTTCTCA
TCTCCTACGTCGCTCGTGAATTGAACACTACCTACAAAGCCGCAGCTGCA
GACCCCTCTCTGTTGACGCCCTCGTCCGCTGCCATAGACGCCGCGATCAA
GCAAGGGTTCACTCGTTTGGACGACGATATCGTGCACAGCAGTGTCGACA
AGGTGCTCAAGTCCAACTCCCGCCGGGTCGCAGCCGAGATGCTTGCGCCT
GCTCTTTCCGGATCTTGCGCTCTTCTTGCTTTCTACGACTCTCAATCTAA
GGATTTGAAGGTCGCCTGCGCAGGTGACTCCAGAGCTGTTCTGGGTCGTC
GCGCTGCGAACGGTAAATGGTCGGCAACACCTCTTTCCGAAGACCAGACT
GGTGGAACTCCGTCGGAGATGAAGCGTCTACGGGAGGAGCATCCCGGGGA
GCCCAACGTTGTGCGCAACGGACGGATTCTCGGACAGCTTGAGCCGAGTC
GCTCTTTTGGAGATGCTTTCTACAAGTGGAGCAGGGATACGCAGGACAAG
ATCAAGCGACAGTTCTTTGGTCGCACTCCCCATCCCCTGTTGAAGACCCC
TCCCTACGTGACTGCCGAGCCAATCATCACCACCACAAAGATGGACCCCG
GCAGCGGTGACTTCCTCGTCCTCGCAACCGACGGTCTCTGGGAGATGTTG
AGCAACGAGGAAGTTGTCGGTCTTGTTGGCCAGTGGGTTGAGCAGCAGCA
GCAATTCGGCGCCAGTGGCAGCAACAAGGCCTGGCTGAAGAGCTGGTTTA
GCTTTGGCAACAAGTCAGAGCTGCCCGTGGAAGGGCCCAAGGAGACCGAC
GCTGAAGGCCAACGCCGTCCCATTCGCCAGCAGCAATACGACATTGCTGG
AGCAGCCAGCCGGTTCACTGTTGAGGATCAAAACGCTGCGACTCACCTTG
TGCGCAATGCCATGGGAGGAAAGGACAAGGAAATGGTCTCCGCCTTGCTC
ACACTTCCCAGTCCTTATTCTCGCAGATACCGATGCGTCGTGCGGCTTTT
CAGGCCCTTCGTACTGCCCGTCGCGTGCCAGCATGGAAGGTCACTGGTAG
GAAACCGTGCGCCGTGTCCTTCTCTAGCAGTCGGAGTCTCGGTCTACGTG
CTTCCTCCACGGGCAAACACCCCTCTTATCTCTCCGCCCCCCTACAGTCG
TCGATGCATCTTCGGAACTTCTCGCTCGCTGTCATTTCGACCGTCGTCGC
TTCGGGCGCCTGGTACGCTTATCAGGGCACCGGCCAGACATCGGCGGGTC
TGAACCCAACATCGTCGCAATTCCGTTCGTATTCGACCGCTGGTGCGCAA
GCTGAAGCCCCTGCGGAGGCCACTCGACGTGCGCTGCTGGTGGATAATGA
CCAGTTTTTTACCGCCCCTATTTCTGGAGATCAGCCTTTATCCAAGCACA
CGGACGATTCCGACCGTCGAGTTCTCGAGATGTTGACCCCGGAGCAGGCC
ACACAGAAGCTCAGGAAGAACGAAGAGTCATATTTGGTGAACCGGGGCAA
GGGAGTGGTCCGTTATGATATTGTTCAGGTGCCTAGTAATTCTCCGATCG
AGGATGATCATGCCGAAAAGATCATTGAGGTGCCGTCGTCCGTAGCGGCA
GCCAATCAAGGCGAATCCAAGAGTGATTGGATGTTCTGGGCGGTGTTTGA
TGGCCATTCTGACGACGTAACTGTCGAGGTTATCTTCTTCGGCGAGGGCC
CTGACAACCGCACCGTCACCATCAACGAAGAGGCCAGCGCATCCGAGGAG
AGCGTCAAGGCCAAGCTGTAGAGGCTGGACAACATCTGCCAAATTGCGCA
ATGTTCTCATCTCCTACGTCGCTCGTGAATTGAACACTACCTACAAAGCC
GCAGCTGCAGACCCCTCTCTGTTGACGCCCTCGTCCGCTGCCATAGACGC
CGCGATCAAGCAAGGGTTCACTCGTTTGGACGACGATATCGTGCACAGCA
GTGTCGACAAGGTGCTCAAGTCCAACTCCCGCCGGGTCGCAGCCGAGATG
CTTGCGCCTGCTCTTTCCGGATCTTGCGCTCTTCTTGCTTTCTACGACTC
TCAATCTAAGGATTTGAAGGTCGCCTGCGCAGGTGACTCCAGAGCTGTTC
TGGGTCGTCGCGCTGCGAACGGTAAATGGTCGGCAACACCTCTTTCCGAA
GACCAGACTGGTGGAACTCCGTCGGAGATGAAGCGTCTACGGGAGGAGCA
TCCCGGGGAGCCCAACGTTGTGCGCAACGGACGGATTCTCGGACAGCTTG
AGCCGAGTCGCTCTTTTGGAGATGCTTTCTACAAGTGGAGCAGGGATACG
CAGGACAAGATCAAGCGACAGTTCTTTGGTCGCACTCCCCATCCCCTGTT
GAAGACCCCTCCCTACGTGACTGCCGAGCCAATCATCACCACCACAAAGA
TGGACCCCGGCAGCGGTGACTTCCTCGTCCTCGCAACCGACGGTCTCTGG
GAGATGTTGAGCAACGAGGAAGTTGTCGGTCTTGTTGGCCAGTGGGTTGA
GCAGCAGCAGCAATTCGGCGCCAGTGGCAGCAACAAGGCCTGGCTGAAGA
GCTGGTTTAGCTTTGGCAACAAGTCAGAGCTGCCCGTGGAAGGGCCCAAG
GAGACCGACGCTGAAGGCCAACGCCGTCCCATTCGCCAGCAGCAATACGA
CATTGCTGGAGCAGCCAGCCGGTTCACTGTTGAGGATCAAAACGCTGCGA
CTCACCTTGTGCGCAATGCCATGGGAGGAAAGGACAAGGAAATGGTCTCC
GCCTTGCTCACACTTCCCAGTCCTTATTCTCGCAGATACCGATGCGTCGT
GCGGCTTTTCAGGCCCTTCGTACTGCCCGTCGCGTGCCAGCATGGAAGGT
CACTGGTAGGAAACCGTGCGCCGTGTCCTTCTCTAGCAGTCGGAGTCTCG
GTCTACGTGCTTCCTCCACGGGCAAACACCCCTCTTATCTCTCCGCCCCC
CTACAGTCGTCGATGCATCTTCGGAACTTCTCGCTCGCTGTCATTTCGAC
CGTCGTCGCTTCGGGCGCCTGGTACGCTTATCAGGGCACCGGCCAGACAT
CGGCGGGTCTGAACCCAACATCGTCGCAATTCCGTTCGTATTCGACCGCT
GGTGCGCAAGCTGAAGCCCCTGCGGAGGCCACTCGACGTGCGCTGCTGGT
GGATAATGACCAGTTTTTTACCGCCCCTATTTCTGGAGATCAGCCTTTAT
CCAAGCACACGGACGATTCCGACCGTCGAGTTCTCGAGATGTTGACCCCG
GAGCAGGCCACACAGAAGCTCAGGAAGAACGAAGAGTCATATTTGGTGAA
CCGGGGCAAGGGAGTGGTCCGTTATGATATTGTTCAGGTGCCTAGTAATT
CTCCGATCGAGGATGATCATGCCGAAAAGATCATTGAGGTGCCGTCGTCC
GTAGCGGCAGCCAATCAAGGCGAATCCAAGAGTGATTGGATGTTCTGGGC
GGTGTTTGATGGCCATTCTGACGACGTAACTGTCGAGGTTATCTTCTTCG
GCGAGGGCCCTGACAACCGCACCGTCACCATCAACGAAGAGGCCAGCGCA
TCCGAGGAGAGCGTCAAGGCCAAGCTGTAGAGGCTGGACAACATCTGCCA
AATTGCGCAATGTTCTCATCTCCTACGTCGCTCGTGAATTGAACACTACC
TACAAAGCCGCAGCTGCAGACCCCTCTCTGTTGACGCCCTCGTCCGCTGC
CATAGACGCCGCGATCAAGCAAGGGTTCACTCGTTTGGACGACGATATCG
TGCACAGCAGTGTCGACAAGGTGCTCAAGTCCAACTCCCGCCGGGTCGCA
GCCGAGATGCTTGCGCCTGCTCTTTCCGGATCTTGCGCTCTTCTTGCTTT
CTACGACTCTCAATCTAAGGATTTGAAGGTCGCCTGCGCAGGTGACTCCA
GAGCTGTTCTGGGTCGTCGCGCTGCGAACGGTAAATGGTCGGCAACACCT
CTTTCCGAAGACCAGACTGGTGGAACTCCGTCGGAGATGAAGCGTCTACG
GGAGGAGCATCCCGGGGAGCCCAACGTTGTGCGCAACGGACGGATTCTCG
GACAGCTTGAGCCGAGTCGCTCTTTTGGAGATGCTTTCTACAAGTGGAGC
AGGGATACGCAGGACAAGATCAAGCGACAGTTCTTTGGTCGCACTCCCCA
TCCCCTGTTGAAGACCCCTCCCTACGTGACTGCCGAGCCAATCATCACCA
CCACAAAGATGGACCCCGGCAGCGGTGACTTCCTCGTCCTCGCAACCGAC
GGTCTCTGGGAGATGTTGAGCAACGAGGAAGTTGTCGGTCTTGTTGGCCA
GTGGGTTGAGCAGCAGCAGCAATTCGGCGCCAGTGGCAGCAACAAGGCCT
GGCTGAAGAGCTGGTTTAGCTTTGGCAACAAGTCAGAGCTGCCCGTGGAA
GGGCCCAAGGAGACCGACGCTGAAGGCCAACGCCGTCCCATTCGCCAGCA
GCAATACGACATTGCTGGAGCAGCCAGCCGGTTCACTGTTGAGGATCAAA
ACGCTGCGACTCACCTTGTGCGCAATGCCATGGGAGGAAAGGACAAGGAA
ATGGTCTCCGCCTTGCTCACACTTCCCAGTCCTTATTCTCGCAGATACCG
ATGCGTCGTGCGGCTTTTCAGGCCCTTCGTACTGCCCGTCGCGTGCCAGC
ATGGAAGGTCACTGGTAGGAAACCGTGCGCCGTGTCCTTCTCTAGCAGTC
GGAGTCTCGGTCTACGTGCTTCCTCCACGGGCAAACACCCCTCTTATCTC
TCCGCCCCCCTACAGTCGTCGATGCATCTTCGGAACTTCTCGCTCGCTGT
CATTTCGACCGTCGTCGCTTCGGGCGCCTGGTACGCTTATCAGGGCACCG
GCCAGACATCGGCGGGTCTGAACCCAACATCGTCGCAATTCCGTTCGTAT
TCGACCGCTGGTGCGCAAGCTGAAGCCCCTGCGGAGGCCACTCGACGTGC
GCTGCTGGTGGATAATGACCAGTTTTTTACCGCCCCTATTTCTGGAGATC
AGCCTTTATCCAAGCACACGGACGATTCCGACCGTCGAGTTCTCGAGATG
TTGACCCCGGAGCAGGCCACACAGAAGCTCAGGAAGAACGAAGAGTCATA
TTTGGTGAACCGGGGCAAGGGAGTGGTCCGTTATGATATTGTTCAGGTGC
CTAGTAATTCTCCGATCGAGGATGATCATGCCGAAAAGATCATTGAGGTG
CCGTCGTCCGTAGCGGCAGCCAATCAAGGCGAATCCAAGAGTGATTGGAT
GTTCTGGGCGGTGTTTGATGGCCATTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_107140ATCC64974_107140Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107140-T1ATCC64974_107140-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107140-T1.cdsATCC64974_107140-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107140-T1.exon3ATCC64974_107140-T1.exon3Aspergillus niger N402exon
ATCC64974_107140-T1.exon2ATCC64974_107140-T1.exon2Aspergillus niger N402exon
ATCC64974_107140-T1.exon1ATCC64974_107140-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036457
DBxrefInterPro:IPR001932
DBxrefPFAM:PF13672
DBxrefPFAM:PF00481
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3625879..3627801 -
Powered by Drupal