You are here

Home

ATCC64974_107150-T1, ATCC64974_107150-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107150-T1
Unique NameATCC64974_107150-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3628234..3630447+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107150-T1 ID=ATCC64974_107150-T1|Name=ATCC64974_107150-T1|organism=Aspergillus niger N402|type=mRNA|length=2214bp|location=Sequence derived from alignment at OGUI01000017.1:3628234..3630447+ (Aspergillus niger N402)
ATGTCCTCCCGTGCGCTCCGCAAGCTGCAGAAGCAGCGCGAACAAGAGCT
GCAGCTGGCACAAGTCGAACAAGAAAACGATGACTCGAGCGATGAAGAGC
CAGTGGTCCGGCCGTCGAAGCCGAAGCTCAACGCCTTCGATCTGTTGAAC
TCAGTCGACGATGACGAAGACGAGCAGGAGTCCGAAAATGAAGCTGAGAT
TGAGGAACCTGAGCCGGTGACTCAACCTAAAGAGGTTCCTGCACCTGCAC
CTGCACCTAAGCCAGCAGCCCCGGGAAAGAAGAATAAGAAGAACAAGAAA
AAAAAGAAGGCTGGAGCTAAATCGGGGGCCGGTGCTGCTACTTCCGAGAC
TACAGGACTGGATGATATCGACAAAGCGCTGAAAGACTTGGCCGTCAACC
CTAAACATTCCGCACACACTGGTGGTCCAGGCGCCGCAGAAGACCGTGAT
GCTGGATTCCCGAAAACACCGGAAGCGCTTCTCGCCATTGATCCTAGATG
CCTGAATGCGACGAACGAGATGCGCAAATTATTTGGGAATGTCGTGTTGG
AAAACTTCGATCAAGATACTGGATCAGGTCGCAGAAGGGATAGAGGGCGA
GAGACGCTTGACTTAGGGCAGGCACTGACAGGTCGGTACAGCCCTGCCAG
TAGGGGTCAGAGTCTGGCTGGCGTGACGCAGCGGCGGAACGTTCTCATGC
AGGGCAGGGATGAGTGGCCTCGATCTCCCAGTGGTGGTCTTGGAATGGAG
CTAGTCGAAAAGCTCCAAAATGGCTCTACTATGTACAAGATTGTGCACAA
TTCATCCTATACAGACGTGCAGAGACAGTTCGATATGTGCGTGGAGTCGA
TGGATCCCCAAAGAATGATCCACCTCTTACAATACAACCCCTACCACATC
TCTACCCTCCTACAGGTGTCTGAGATAGCAAAGCATCAGGGTGATCATGC
AGTCTCGGCCGATCTACTCGAGCGCGCACTGTTCAACATCGGGCGTTCAG
CCCATTCGTCTTTCAGCAACCTCGTTAAGCAAGGCCAGGCAAAACTTGAC
TTTGTGCATATGGAGAACCGCGAGCTGTGGCTGGTTGGCTGGAGGTACAT
TGCTAATCTGGGGATGAAGGGTACTTGGCGGACGGCGTATGAGTGGGCGA
AATTACTACTGAGTCTCAATGAGACTGACCCCTACTGCATCCGGCTTCTT
ATCGATCACTTGGCCCTGCGAGGCCGAGAATATGCCCATTTCGTGGATCT
CTGCACACAGACGCGTCTGAGCAAGGAGTGGGACACCCTTCCCAATATAC
AGTGTTCGCTCGCGCTGGCCTATCTACGACTCAACAAACCGAAGGAATGC
CGCGAGCAGCTGCGGCGAGCCATGTCGCGCTACCCGTGGGTATTCTGTAA
GATGGCGCAAGAGCTCGACATCCAGCCCATGCCAAAGAGGATCTGGGGCA
AGATGCCACCCACGGATGCCCACGAACTTTTCACCGAACTCTACATTAGC
CGTGCCAAAGACCTCTGGAACACTCCTGAAGCGGTTTCTTTGATCGTAGA
AGTGGCCGACACGCTTCCCGACGAAGAAGAGCCCGTTGAGCCGCCGGAGA
TATCGCTGGACATCGCACGCCATGTTGTACTGTCCGATATCCCTCGGGTC
ACGACACATCTTCCAAATCGCTTCGTCGCTGGACGTCTCTCCGCATCCGA
CCCCCTTCCTCCGTACGAGTCGGAAGCCTATCGTCAGCAGTCCGACCCCA
CGCCATCCTACTTGTCGCAGGTACCAGATGTAGGGCGGCCACAATGGCTG
CGAGACCTGCTTGATCAGCTGAACAACGGAGCTATTCATTTCCCTCGGTT
CCAGCGTGATGGAGAGGAAGTACACGAAGATGACGTTCCATCGGAGACCG
AAGCTGAGGACAACCGTGCGCCGGCCCACCCCAGCGCCGATCAGCAACCA
GTCCTCGAACAGTGGCTGTTAAACGATGGGATGCACACGTTGGAAGCATT
CATCCAGCAGTATGGAGTTGACCGCGGAAACTGGGGCGAAGTACTCGACT
ATTCCCCGCTGACGGAGTATGTGGATGGCTTGGAATTGGTTCAGCCAGAG
TCGGAGCGCGAGCGTTTGCTGCATGGACCGATTCGGGAGGCGATGGGCGA
CATGGTGGTTTCCATGCTGGAAGACGAGCTCCAGCTGCTTCAGTATGATG
AGGAAGAAGCTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3628234..3630447+

>ATCC64974_107150-T1 ID=ATCC64974_107150-T1|Name=ATCC64974_107150-T1|organism=Aspergillus niger N402|type=CDS|length=2214bp|location=Sequence derived from alignment at OGUI01000017.1:3628234..3630447+ (Aspergillus niger N402)
ATGTCCTCCCGTGCGCTCCGCAAGCTGCAGAAGCAGCGCGAACAAGAGCT
GCAGCTGGCACAAGTCGAACAAGAAAACGATGACTCGAGCGATGAAGAGC
CAGTGGTCCGGCCGTCGAAGCCGAAGCTCAACGCCTTCGATCTGTTGAAC
TCAGTCGACGATGACGAAGACGAGCAGGAGTCCGAAAATGAAGCTGAGAT
TGAGGAACCTGAGCCGGTGACTCAACCTAAAGAGGTTCCTGCACCTGCAC
CTGCACCTAAGCCAGCAGCCCCGGGAAAGAAGAATAAGAAGAACAAGAAA
AAAAAGAAGGCTGGAGCTAAATCGGGGGCCGGTGCTGCTACTTCCGAGAC
TACAGGACTGGATGATATCGACAAAGCGCTGAAAGACTTGGCCGTCAACC
CTAAACATTCCGCACACACTGGTGGTCCAGGCGCCGCAGAAGACCGTGAT
GCTGGATTCCCGAAAACACCGGAAGCGCTTCTCGCCATTGATCCTAGATG
CCTGAATGCGACGAACGAGATGCGCAAATTATTTGGGAATGTCGTGTTGG
AAAACTTCGATCAAGATACTGGATCAGGTCGCAGAAGGGATAGAGGGCGA
GAGACGCTTGACTTAGGGCAGGCACTGACAGGTCGGTACAGCCCTGCCAG
TAGGGGTCAGAGTCTGGCTGGCGTGACGCAGCGGCGGAACGTTCTCATGC
AGGGCAGGGATGAGTGGCCTCGATCTCCCAGTGGTGGTCTTGGAATGGAG
CTAGTCGAAAAGCTCCAAAATGGCTCTACTATGTACAAGATTGTGCACAA
TTCATCCTATACAGACGTGCAGAGACAGTTCGATATGTGCGTGGAGTCGA
TGGATCCCCAAAGAATGATCCACCTCTTACAATACAACCCCTACCACATC
TCTACCCTCCTACAGGTGTCTGAGATAGCAAAGCATCAGGGTGATCATGC
AGTCTCGGCCGATCTACTCGAGCGCGCACTGTTCAACATCGGGCGTTCAG
CCCATTCGTCTTTCAGCAACCTCGTTAAGCAAGGCCAGGCAAAACTTGAC
TTTGTGCATATGGAGAACCGCGAGCTGTGGCTGGTTGGCTGGAGGTACAT
TGCTAATCTGGGGATGAAGGGTACTTGGCGGACGGCGTATGAGTGGGCGA
AATTACTACTGAGTCTCAATGAGACTGACCCCTACTGCATCCGGCTTCTT
ATCGATCACTTGGCCCTGCGAGGCCGAGAATATGCCCATTTCGTGGATCT
CTGCACACAGACGCGTCTGAGCAAGGAGTGGGACACCCTTCCCAATATAC
AGTGTTCGCTCGCGCTGGCCTATCTACGACTCAACAAACCGAAGGAATGC
CGCGAGCAGCTGCGGCGAGCCATGTCGCGCTACCCGTGGGTATTCTGTAA
GATGGCGCAAGAGCTCGACATCCAGCCCATGCCAAAGAGGATCTGGGGCA
AGATGCCACCCACGGATGCCCACGAACTTTTCACCGAACTCTACATTAGC
CGTGCCAAAGACCTCTGGAACACTCCTGAAGCGGTTTCTTTGATCGTAGA
AGTGGCCGACACGCTTCCCGACGAAGAAGAGCCCGTTGAGCCGCCGGAGA
TATCGCTGGACATCGCACGCCATGTTGTACTGTCCGATATCCCTCGGGTC
ACGACACATCTTCCAAATCGCTTCGTCGCTGGACGTCTCTCCGCATCCGA
CCCCCTTCCTCCGTACGAGTCGGAAGCCTATCGTCAGCAGTCCGACCCCA
CGCCATCCTACTTGTCGCAGGTACCAGATGTAGGGCGGCCACAATGGCTG
CGAGACCTGCTTGATCAGCTGAACAACGGAGCTATTCATTTCCCTCGGTT
CCAGCGTGATGGAGAGGAAGTACACGAAGATGACGTTCCATCGGAGACCG
AAGCTGAGGACAACCGTGCGCCGGCCCACCCCAGCGCCGATCAGCAACCA
GTCCTCGAACAGTGGCTGTTAAACGATGGGATGCACACGTTGGAAGCATT
CATCCAGCAGTATGGAGTTGACCGCGGAAACTGGGGCGAAGTACTCGACT
ATTCCCCGCTGACGGAGTATGTGGATGGCTTGGAATTGGTTCAGCCAGAG
TCGGAGCGCGAGCGTTTGCTGCATGGACCGATTCGGGAGGCGATGGGCGA
CATGGTGGTTTCCATGCTGGAAGACGAGCTCCAGCTGCTTCAGTATGATG
AGGAAGAAGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_107150ATCC64974_107150Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107150-T1.exon1ATCC64974_107150-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107150-T1.cdsATCC64974_107150-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107150-T1ATCC64974_107150-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09260TDY
DBxrefInterPro:IPR006994
DBxrefInterPro:IPR011990
DBxrefPFAM:PF04910
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3628234..3630447 +
Powered by Drupal