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ATCC64974_107370-T1, ATCC64974_107370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107370-T1
Unique NameATCC64974_107370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3687219..3688108+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107370-T1 ID=ATCC64974_107370-T1|Name=ATCC64974_107370-T1|organism=Aspergillus niger N402|type=mRNA|length=890bp|location=Sequence derived from alignment at OGUI01000017.1:3687219..3688108+ (Aspergillus niger N402)
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCGTAAGTCGCCCCATCCAGCTTC
GAGTCAGGTCTGCCTCGGTGCATATCATCATCAGGATTTCAAGGGGGCCA
TCTGAGCCTGTCTATCGCTTTTCATCAGTCTATGGAGGATTGTTCTGTCT
CAATGGATCTGCGGCTGATGAGCTGGTCGTCTAGTTACACTATCTTCTAC
CCCTTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCT
GCGTCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTG
AGGCTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAG
GATGGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCAT
CTACTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGA
GTGAGTAACCAGTAAATTCATGTGTAGGTCATGAGACTCCTACTAACGAT
ATTACGTAGCTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTG
CTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGA
AATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCGCTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3687219..3688108+

>ATCC64974_107370-T1 ID=ATCC64974_107370-T1|Name=ATCC64974_107370-T1|organism=Aspergillus niger N402|type=CDS|length=2025bp|location=Sequence derived from alignment at OGUI01000017.1:3687219..3688108+ (Aspergillus niger N402)
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCTTACACTATCTTCTACCCCTTC
GAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCGTCG
CTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGGCTA
TCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGATGGA
AGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTACTG
CGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGACTTCCA
ACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAACAAGGAG
AAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGCTGCTAT
CAGAGCCGATGCTCCTTACCGCTAAATGGCCGCCCCCAAGTCCGTCGCCA
GGCTCGTCGCCTACTCTCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCC
TTGGGATCCATCGCAAACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCC
AGCTGGTCCCCCCCAACCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGG
ACGAAGGTGCTGAGTCTTCTCTCGACAAGGCCGGAAAGTACTTCCTTATG
GCTGAGTTGTTGCGCGGCATGTACGTCGTGCTGGAGCAGTTCTTCAGACC
TCCTTACACTATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCCGTT
TCCGTGGTGAACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGTTGC
ATTGCCTGCAAGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCACCAT
CGAGGCTGAGGAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACGATA
TCGACATGACCAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGCCCT
GTCGACGCTATTGTTGAGACTTCCAACGCCGAATATGCCACCGAGACCCG
TGAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGACAAGT
GGGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCGCTAA
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCTTACACTATCTTCTACCCCTTC
GAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCGTCG
CTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGGCTA
TCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGATGGA
AGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTACTG
CGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGACTTCCA
ACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAACAAGGAG
AAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGCTGCTAT
CAGAGCCGATGCTCCTTACCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0016651oxidoreductase activity, acting on NAD(P)H
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_107370ATCC64974_107370Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107370-T1.exon1ATCC64974_107370-T1.exon1Aspergillus niger N402exon
ATCC64974_107370-T1.exon2ATCC64974_107370-T1.exon2Aspergillus niger N402exon
ATCC64974_107370-T1.exon3ATCC64974_107370-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107370-T1.cdsATCC64974_107370-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107370-T1ATCC64974_107370-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR017900
DBxrefInterPro:IPR010226
DBxrefInterPro:IPR017896
DBxrefPFAM:PF13187
DBxrefPFAM:PF12838
DBxrefPFAM:PF12800
DBxrefPFAM:PF13237
DBxrefPFAM:PF00037
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3687219..3688108 +
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