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ATCC64974_107420-T1, ATCC64974_107420-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107420-T1
Unique NameATCC64974_107420-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3698415..3699670+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107420-T1 ID=ATCC64974_107420-T1|Name=ATCC64974_107420-T1|organism=Aspergillus niger N402|type=mRNA|length=1256bp|location=Sequence derived from alignment at OGUI01000017.1:3698415..3699670+ (Aspergillus niger N402)
ATGATTGTTCGGCAACTTGTGCGGCAAAGTGAGTTACTCCATGGATTGGG
TTTATTGATAGGAAATATTGATGCTGATTCCCCCGTCCCCATCTAGGCCG
CCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTT
CCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAA
GCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGG
TACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGTAAGT
ACCGCAATATTCTAGCTGTTACGCCTGTCGCTGCCCGAAGGGAAAGCTAA
TATACATCCTCTGGTTCAGGAGTCAAATTCCACAGTCTCGGTAGCGATGT
GACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCA
CCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACAC
TCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAG
GGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCC
GTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTC
TTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGA
ATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGA
CCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGC
TTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCG
TGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTG
TCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATC
GACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGA
CGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAG
GAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTG
ACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCT
AGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCT
CTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGAC
GAATAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3698415..3699670+

>ATCC64974_107420-T1 ID=ATCC64974_107420-T1|Name=ATCC64974_107420-T1|organism=Aspergillus niger N402|type=CDS|length=3339bp|location=Sequence derived from alignment at OGUI01000017.1:3698415..3699670+ (Aspergillus niger N402)
ATGATTGTTCGGCAACTTGTGCGGCAAAGCCGCCAGCTTCGGGCTCTTCC
CCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGACGACTGGCC
AGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAATTAGAGACG
CCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAGA
GAGATTGGATCCGAACACGCTCCGCCGAGTCAAATTCCACAGTCTCGGTA
GCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCT
CAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCT
TGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCG
GTATCAGGGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTAC
CTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATT
GATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAG
CTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGT
AGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGT
GAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAAT
CTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAG
AACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGG
TATCATCGACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTG
CGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGA
CGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGG
TCACTTGACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGC
AGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAA
GTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAA
GGATGACGAATAGATGATTGTTCGGCAACTTGTGCGGCAAAGCCGCCAGC
TTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACG
GAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACC
TCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGT
CTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGAGTCAAATTC
CACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCT
CAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCA
ACCAGACACACCTTGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCG
CGCTATATCTTCGGTATCAGGGAGGGAACTCACATCATCTCCCTTGATGT
GACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCT
ACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGT
GCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCG
TTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCG
AAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAA
GAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTT
GAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACG
TCCCGACTATCGGTATCATCGACACCGACGCCGACCCTACCCGTGTCACA
TACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGC
TGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGA
GAGCGCGCAAGGGTCACTTGACGTATGAACATATGGAGCCACTCCGTGTC
CAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGC
CTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGG
AAGAGGCTTCCAAGGATGACGAATAGATGATTGTTCGGCAACTTGTGCGG
CAAAGCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCG
ATTCTCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTG
CGGAGCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGG
GAGCCTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCG
CCGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGC
CAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAA
ATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAA
CCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCA
TCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTG
GAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAA
GGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATC
ACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATC
TTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGA
TGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACC
TTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGT
GGTCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCC
TACCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCG
TGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGG
AGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGA
GCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGAC
AGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTC
GAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_107420ATCC64974_107420Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107420-T1.exon1ATCC64974_107420-T1.exon1Aspergillus niger N402exon
ATCC64974_107420-T1.exon2ATCC64974_107420-T1.exon2Aspergillus niger N402exon
ATCC64974_107420-T1.exon3ATCC64974_107420-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107420-T1.cdsATCC64974_107420-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107420-T1ATCC64974_107420-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263J7D
DBxrefInterPro:IPR023591
DBxrefInterPro:IPR005706
DBxrefInterPro:IPR001865
DBxrefPFAM:PF00318
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3698415..3699670 +
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