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ATCC64974_107580-T1, ATCC64974_107580-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107580-T1
Unique NameATCC64974_107580-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3742578..3743434+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107580-T1 ID=ATCC64974_107580-T1|Name=ATCC64974_107580-T1|organism=Aspergillus niger N402|type=mRNA|length=857bp|location=Sequence derived from alignment at OGUI01000017.1:3742578..3743434+ (Aspergillus niger N402)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGGTAGGTGACAGCAGAAAAACAGCAA
CTAGGCAACAACAAATGATGTCTAACGGGTTATTGATCTGTATAGCGGCT
AAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGAC
GACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGG
CGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCG
ATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAAT
GTATGTTGTTTCGTTACGGTATCATTTGAGTGATGGGAACACGGCAACTG
ACTATGGTCTAGGGATACACTTCGCGAACAGCACCAACTCAGCACCGAAA
TCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCC
GATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCG
GATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTAC
CTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTAT
GAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3742578..3743434+

>ATCC64974_107580-T1 ID=ATCC64974_107580-T1|Name=ATCC64974_107580-T1|organism=Aspergillus niger N402|type=CDS|length=2676bp|location=Sequence derived from alignment at OGUI01000017.1:3742578..3743434+ (Aspergillus niger N402)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGCGGCTAAGAACGCCCTTCGACGGAA
GAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGC
TAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACT
TTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTC
CATGACGCTTGATACGGTGGATCAGACAATGGATACACTTCGCGAACAGC
ACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTC
GACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCA
GGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAG
ACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAATCAAATCCAAA
CCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGC
GGAAATGGCCATGGGATAAATGTGGTCTTGGTTCGGCGGATCCGCCGCTC
AGAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAG
CTGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGA
GCAGGATGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGCGGCTA
AGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACG
ACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGC
GAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGA
TGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATG
GATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCAT
TACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGG
AACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACA
GGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAA
TGGAGAAATCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAG
AACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAATGTGGTCTTGG
TTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGAT
CCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATT
TGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACG
TCAAACAAGGCCGCGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGA
GAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGA
TCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATG
GAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGA
TACGGTGGATCAGACAATGGATACACTTCGCGAACAGCACCAACTCAGCA
CCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGAC
GAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGA
CGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACC
GTTTACCTCCTGCGGCAAATGGAGAAATCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAAATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAG
ATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTC
CAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAAT
TGCTCGGAAGAACGTAACGTCAAACAAGGCCGCGGCTAAGAACGCCCTTC
GACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATC
GTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCA
GGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCC
ATGGCTCCATGACGCTTGATACGGTGGATCAGACAATGGATACACTTCGC
GAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAA
TCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCT
TGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCG
GTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAATCAA
ATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGC
TACGTGCGGAAATGGCCATGGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7ATCC64974_107580Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107580-T1.exon1ATCC64974_107580-T1.exon1Aspergillus niger N402exon
ATCC64974_107580-T1.exon2ATCC64974_107580-T1.exon2Aspergillus niger N402exon
ATCC64974_107580-T1.exon3ATCC64974_107580-T1.exon3Aspergillus niger N402exon
ATCC64974_107580-T1.exon4ATCC64974_107580-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107580-T1.cdsATCC64974_107580-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107580-T1ATCC64974_107580-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264W71
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3742578..3743434 +
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