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ATCC64974_107700-T1, ATCC64974_107700-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107700-T1
Unique NameATCC64974_107700-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3790115..3791670-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107700-T1 ID=ATCC64974_107700-T1|Name=ATCC64974_107700-T1|organism=Aspergillus niger N402|type=mRNA|length=1556bp|location=Sequence derived from alignment at OGUI01000017.1:3790115..3791670- (Aspergillus niger N402)
ATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGC
GCCCGCACAAGAGAGCGATGTCGAATCTTCCACCCCAGAGCAAACGCAAG
AACCAGAAGCACAAGAGCAAGAACAAGAAGAGGGACAGTCCAAGACATTC
AAGGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGACCATGGG
CTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTC
AAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCA
GCGTTTGCTCTTCCCATCCTCCAAGGTACGTTTCCAGCTACAACAATCTT
GTATCGCCTTTTATCGGCGCTCCCAAATATGACTAGATCAAATAACTAAC
ATCACCCCACAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTC
CTCGCCCCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTC
CCTAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGG
ACATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTG
GCCACCCCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTC
CCTCCGCAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTG
ACATGGACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGT
GAGCGCCGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATC
CCTCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAA
GCAAATACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCC
CAGAAGCACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGG
CCAGAGTACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTG
CGTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAG
CTTTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAG
TCGGAATATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTC
CGTCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGGTGGTATGTATACC
CGGTCTTCTGCTATGGGAGTATTATTGGAGTCGGCTAATGTTTTTATGTA
TTAGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCTGG
AAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTT
GGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACTGC
CCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACG
GCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAGGG
GCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGGAG
GGTTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3790115..3791670-

>ATCC64974_107700-T1 ID=ATCC64974_107700-T1|Name=ATCC64974_107700-T1|organism=Aspergillus niger N402|type=CDS|length=4212bp|location=Sequence derived from alignment at OGUI01000017.1:3790115..3791670- (Aspergillus niger N402)
ATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCTGGAAAG
AGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTTGGCT
GAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACTGCCCTA
AGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACGGCAG
GCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAGGGGCAA
GAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGGAGGGTT
AGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCCCCAA
CCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGGCGCC
AGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGACATGGTCTC
TCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGGCCACCCCTG
GTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCCCTCCGCAAC
CTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGACATGGACTT
CGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGCCGCA
CATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCAACGT
GCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAATACCA
GACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAGCACA
AGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAGTACT
ATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGCGTTCTTGCT
TCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCACAGT
CTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAATATT
CTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCGTTGA
TGTTGTGCTTAACTTTGATTTGCCGGGTGATGCCTGGAGTCAAGAAGCGC
AAGGTCGCCCGTGAGGCACCTGCGCCTGCGCCCGCACAAGAGAGCGATGT
CGAATCTTCCACCCCAGAGCAAACGCAAGAACCAGAAGCACAAGAGCAAG
AACAAGAAGAGGGACAGTCCAAGACATTCAAGGAACTAGGAATCATCGAA
CAGCTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTACACCTAT
TCAGCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTGATCGGTC
TTGCAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCCCATCCTC
CAAGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCTGG
AAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTT
GGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACTGC
CCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACG
GCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAGGG
GCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGGAG
GGTTAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCC
CCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGG
CGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGACATGG
TCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGGCCACC
CCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCCCTCCG
CAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGACATGG
ACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGC
CGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCA
ACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAAT
ACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAG
CACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAG
TACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGCGTTCT
TGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCA
CAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAA
TATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCG
TTGATGTTGTGCTTAACTTTGATTTGCCGGGTGATGCCTGGAGTCAAGAA
GCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGCGCCCGCACAAGAGAGCG
ATGTCGAATCTTCCACCCCAGAGCAAACGCAAGAACCAGAAGCACAAGAG
CAAGAACAAGAAGAGGGACAGTCCAAGACATTCAAGGAACTAGGAATCAT
CGAACAGCTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTACAC
CTATTCAGCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTGATC
GGTCTTGCAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCCCAT
CCTCCAAGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTG
CTGGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAG
GTTTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGA
CTGCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGC
AACGGCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGC
AGGGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGA
GGAGGGTTAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCCT
CGCCCCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCCC
TAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGAC
ATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGGC
CACCCCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCCC
TCCGCAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGAC
ATGGACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTGA
GCGCCGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCCC
TCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAGC
AAATACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCCA
GAAGCACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGCC
AGAGTACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGCG
TTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGCT
TTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGTC
GGAATATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCCG
TCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGGTGATGCCTGGAGTCA
AGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGCGCCCGCACAAGAG
AGCGATGTCGAATCTTCCACCCCAGAGCAAACGCAAGAACCAGAAGCACA
AGAGCAAGAACAAGAAGAGGGACAGTCCAAGACATTCAAGGAACTAGGAA
TCATCGAACAGCTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCT
ACACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTT
GATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTC
CCATCCTCCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RRP3ATCC64974_107700Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107700-T1ATCC64974_107700-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107700-T1.cdsATCC64974_107700-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107700-T1.exon3ATCC64974_107700-T1.exon3Aspergillus niger N402exon
ATCC64974_107700-T1.exon2ATCC64974_107700-T1.exon2Aspergillus niger N402exon
ATCC64974_107700-T1.exon1ATCC64974_107700-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Productribosomal RNA processing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3790115..3791670 -
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