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ATCC64974_107900-T1, ATCC64974_107900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107900-T1
Unique NameATCC64974_107900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3841544..3843112+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107900-T1 ID=ATCC64974_107900-T1|Name=ATCC64974_107900-T1|organism=Aspergillus niger N402|type=mRNA|length=1569bp|location=Sequence derived from alignment at OGUI01000017.1:3841544..3843112+ (Aspergillus niger N402)
ATGGGGTGAGTCAAGACAACGATCATCATCTGACAAAGGAAGGACATGGG
CTAACGGATATCTTCTACAACAGTAAGGAGGACAAGACTCACATCAACAT
CGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACC
TGATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAG
AAGGTAAGGAGGATTATACATCTGAAAGAAGAATATCAAGACATGGTGCT
AACAACATCCTACAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTA
CGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCA
TCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTC
ATTGGTAAGTACTATCACAGAGTTCTCTCGATCAAATTAACATACTAACG
TACATGATAGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCAC
TGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTG
GTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCT
CTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAA
GATGGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGG
AGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCT
TTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCC
CAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGG
TCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTC
CGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGAT
CTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTG
CCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTC
AAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGA
CAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTG
GTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGC
TTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGG
TTACGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCG
CTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCT
TCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCC
CTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTC
GTTTCGCTGTCCGCGACATGCGCCAGACTGTTGCTGTCGGTGTTATCAAG
GCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCA
GAAGGCCGGTAAGAAATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3841544..3843112+

>ATCC64974_107900-T1 ID=ATCC64974_107900-T1|Name=ATCC64974_107900-T1|organism=Aspergillus niger N402|type=CDS|length=5532bp|location=Sequence derived from alignment at OGUI01000017.1:3841544..3843112+ (Aspergillus niger N402)
ATGGGTAAGGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGT
CGATTCCGGCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTG
GTATCGACCAGCGTACCATCGAGAAGTTCGAGAAGGAAGCCGCCGAGCTC
GGTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGA
GCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTG
GCAAGTATGAGGTCACCGTCATTGACGCCCCCGGTCACCGTGACTTCATC
AAGAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCAT
TGCCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGA
CTCGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATT
GTTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAA
CGAAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACC
CCAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATG
CTCGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGAC
CAAGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCA
TCGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAG
GATGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGA
GACCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACG
TCACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAG
GGTGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAA
GGAGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTC
TTGGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGT
CAGGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACAT
TGCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAA
AGTCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATC
GTCAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTA
CCCCCCTCTTGGTCGTTTCGCTGTCCGCGACATGCGCCAGACTGTTGCTG
TCGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTT
ACCAAGGCCGCCCAGAAGGCCGGTAAGAAATAAATGGGTAAGGAGGACAA
GACTCACATCAACATCGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCA
CCACCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGACCAGCGTACC
ATCGAGAAGTTCGAGAAGGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAA
GTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCA
CCATCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACC
GTCATTGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGG
TACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTGGTG
AGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCTCTG
CTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGAT
GGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGGAGA
CCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCTTTC
GTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCCCAA
CTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCA
CCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTCCGT
CCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGATCTC
CGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTGCCC
CTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTCAAG
TCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAA
CGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTA
ACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGCTTC
ACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGGTTA
CGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCGCTG
AGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCTTCC
CCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCCCTC
CAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTCGTT
TCGCTGTCCGCGACATGCGCCAGACTGTTGCTGTCGGTGTTATCAAGGCT
GTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAA
GGCCGGTAAGAAATAAATGGGTAAGGAGGACAAGACTCACATCAACATCG
TCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACCTG
ATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAGAA
GGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTG
ACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTC
TGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTCATTGACGCCCCCGG
TCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGACT
GCGCTATCCTCATCATTGCCTCCGGTACTGGTGAGTTCGAGGCTGGTATC
TCCAAGGATGGCCAGACTCGTGAGCACGCTCTGCTTGCTTTCACCCTCGG
TGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACCTGCAAGTGGT
CCGAGGACCGTTACAACGAAATCGTTAAGGAGACCTCCAACTTCATCAAG
AAGGTCGGCTACAACCCCAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTT
CAACGGTGACAACATGCTCGAGCCCTCCCCCAACTGCCCCTGGTACAAGG
GTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCACCGGTAAGACCCTCCTC
GAGGCCATCGACGCCATCGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCT
CCGTCTTCCCCTCCAGGATGTCTACAAGATCTCCGGTATTGGAACTGTTC
CCGTCGGTCGTGTCGAGACCGGTATCATTGCCCCTGGTATGGTCGTGACC
TTCGCTCCCGCCAACGTCACCACTGAAGTCAAGTCCGTTGAGATGCACCA
CCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAACGTTGGTTTCAACGTCA
AGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGCCGGTGACTCC
AAGAACGACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCCAGGTCATCGT
CCTCAACCACCCCGGTCAGGTCGGCGCTGGTTACGCTCCCGTCCTGGACT
GCCACACTGCTCACATTGCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATT
GACCGCCGTACCGGAAAGTCTGTTGAATCTTCCCCCAAGTTCATCAAGTC
CGGTGACGCTGCCATCGTCAAGATGATTCCCTCCAAGCCCATGTGTGTTG
AGGCTTTCACTGACTACCCCCCTCTTGGTCGTTTCGCTGTCCGCGACATG
CGCCAGACTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGG
TGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGTAAGAAATAAA
TGGGTAAGGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGTC
GATTCCGGCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTGG
TATCGACCAGCGTACCATCGAGAAGTTCGAGAAGGAAGCCGCCGAGCTCG
GTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAG
CGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTGG
CAAGTATGAGGTCACCGTCATTGACGCCCCCGGTCACCGTGACTTCATCA
AGAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATT
GCCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGAC
TCGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTG
TTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAAC
GAAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCC
CAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGC
TCGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACC
AAGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCAT
CGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGG
ATGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAG
ACCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGT
CACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGG
GTGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAG
GAGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCT
TGGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTC
AGGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACATT
GCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAA
GTCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCG
TCAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTAC
CCCCCTCTTGGTCGTTTCGCTGTCCGCGACATGCGCCAGACTGTTGCTGT
CGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTA
CCAAGGCCGCCCAGAAGGCCGGTAAGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TEF1ATCC64974_107900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107900-T1.exon1ATCC64974_107900-T1.exon1Aspergillus niger N402exon
ATCC64974_107900-T1.exon2ATCC64974_107900-T1.exon2Aspergillus niger N402exon
ATCC64974_107900-T1.exon3ATCC64974_107900-T1.exon3Aspergillus niger N402exon
ATCC64974_107900-T1.exon4ATCC64974_107900-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107900-T1.cdsATCC64974_107900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107900-T1ATCC64974_107900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR031157
DBxrefInterPro:IPR004539
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation elongation factor EF-1 alpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3841544..3843112 +
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