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ATCC64974_108070-T1, ATCC64974_108070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108070-T1
Unique NameATCC64974_108070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3894647..3895649-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108070-T1 ID=ATCC64974_108070-T1|Name=ATCC64974_108070-T1|organism=Aspergillus niger N402|type=mRNA|length=1003bp|location=Sequence derived from alignment at OGUI01000017.1:3894647..3895649- (Aspergillus niger N402)
ATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAA
GGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGGTATGTGCT
ATCTACGCTGGCCTACCCGCTCCCGGGCAATCCCATACCCCTCCCACTCC
CCGTGGTAGTAGCCTCGTGGCATCCAGCATCGCCGCCGCCTCCCCCCTTG
CTTGCTGCCCAGTCCCGTCAAACGTACAGCGCGAGCATTCCTGATAACCC
CACCGTTGAAATTGAATTTGCGTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCCCGCAAACTTGGCTTTTTCTTGGAATCCTCCACTTGCCTCAAATTTCG
TATCTAATTCAAATCCCCCACAGACAAGAACGACGAGTCTCTCAACCGCT
GGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAAT
GATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACG
TCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCA
AGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTC
GTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGT
GGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGGTAA
GTACTCTCATCTCGACAATCGCAGGATGTAAGCCATGTACTCACTCGCTT
ATAGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGA
AGTGTAAGCCACTACCCTACTATATGACACAAGTAGAAAGGAAAAAGATA
TAAAAGTACTAACCCGACGCAGTCAACGCCGAGGAAGCCCCCTCAGGCAT
GATGTACCGTGGCCACTACAACGCCGTGTCCAAGTTCGTCGACGATGACA
ACCACACCCACCTCCAGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGG
TAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3894647..3895649-

>ATCC64974_108070-T1 ID=ATCC64974_108070-T1|Name=ATCC64974_108070-T1|organism=Aspergillus niger N402|type=CDS|length=2376bp|location=Sequence derived from alignment at OGUI01000017.1:3894647..3895649- (Aspergillus niger N402)
TCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAAC
GCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGA
GTGGTCCTTCGACATCGCCAAGGACTGGTAGGGAAGCTACGCTCCCAGCA
CCACCGACAAGCCCGTCTACGAGAAGAAGTACAAGAACGACGAGTCTCTC
AACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGA
CCCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGC
AGGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAG
ACCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACAT
CAAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACC
TGCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATG
CTGATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTT
CAAGGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGTCAACG
CCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGCCGTG
TCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGTGGTC
CTTCGACATCGCCAAGGACTGGTAGGGAAGCTACGCTCCCAGCACCACCG
ACAAGCCCGTCTACGAGAAGAAGTACAAGAACGACGAGTCTCTCAACCGC
TGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAA
TGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGAC
GTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTC
AAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGT
CGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGG
TGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGATG
CCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGT
CGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGTCAACGCCGAGG
AAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGCCGTGTCCAAG
TTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGTGGTCCTTCGA
CATCGCCAAGGACTGGTAGGGAAGCTACGCTCCCAGCACCACCGACAAGC
CCGTCTACGAGAAGAAGTACAAGAACGACGAGTCTCTCAACCGCTGGAAG
GCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAATGATCC
CAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACGTCCCG
ATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCAAGGAC
AAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTCGTCTT
CCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGTGGTGA
AGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGATGCCTGAG
CACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGA
GAAGAAGACCATTGAAGAGTACCAGAACCTTGTCAACGCCGAGGAAGCCC
CCTCAGGCATGATGTACCGTGGCCACTACAACGCCGTGTCCAAGTTCGTC
GACGATGACAACCACACCCACCTCCAGTTCGAGTGGTCCTTCGACATCGC
CAAGGACTGGTAGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCT
ACGAGAAGAAGTACAAGAACGACGAGTCTCTCAACCGCTGGAAGGCCTCT
CTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAATGATCCCAGAAA
GTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACGTCCCGATGTTG
TGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCAAGGACAAGCCC
TTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTCGTCTTCCAGGT
GCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGTGGTGAAGCGCA
AGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGATGCCTGAGCACGAA
GAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAAGAA
GACCATTGAAGAGTACCAGAACCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_108070ATCC64974_108070Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108070-T1ATCC64974_108070-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108070-T1.cdsATCC64974_108070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108070-T1.exon4ATCC64974_108070-T1.exon4Aspergillus niger N402exon
ATCC64974_108070-T1.exon3ATCC64974_108070-T1.exon3Aspergillus niger N402exon
ATCC64974_108070-T1.exon2ATCC64974_108070-T1.exon2Aspergillus niger N402exon
ATCC64974_108070-T1.exon1ATCC64974_108070-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264KK7
DBxrefInterPro:IPR014756
DBxrefInterPro:IPR000406
DBxrefInterPro:IPR024792
DBxrefPFAM:PF02115
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3894647..3895649 -
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