You are here

Home

ATCC64974_108080-T1, ATCC64974_108080-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108080-T1
Unique NameATCC64974_108080-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3897568..3899155+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108080-T1 ID=ATCC64974_108080-T1|Name=ATCC64974_108080-T1|organism=Aspergillus niger N402|type=mRNA|length=1588bp|location=Sequence derived from alignment at OGUI01000017.1:3897568..3899155+ (Aspergillus niger N402)
ATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCCTTGCGGACGT
GGCTCCTGCTTGTAAGTTGTGATTCCAGCTAGCGCCCGAGCTCAGACTCG
ATCGTGGCATGCCGATATCTCCACCAAAGCGTGCGCCAGGCTAACCCGTC
TCCTCCTATCTCCGCGATATCAGACGATGAACTTCTCTCGCGCCGTCGTC
TGGGAAAGACCAACCTCGCCGTGAAACCCACCCAGGTTGGCACGTCAAAT
GCGACAAAGCCTGAAAACCTCGGCCCCTTCGAGTATGCACACTTGCGCGC
GCCGCTGCCTAGAGACCTCAAGGGCTCCGAGATTTTCCCCTCACACTCGC
CTCAACAACATCCCGAAACCTACTTTTTGATGGTAAGGATGGCTGATGAC
GAACAAAATGTGATGTCATAGAATGGCTGTTGACCTGTCGCTATAGAGAC
GTAGCAAAGATGGATTCGTCAGTGCTACCGGAATGTTCAAGATTGCCTTC
CCTTGGGCAAAGCTCGATGAAGAACGGTCTGAGCGGGAGTATCTGAAGAC
CCGGACGGAGACTAGTGAAGATGAGATCGCCGGCAATGTTTGGATCTCGC
CTCTGCTCGGTAAGCGTCACAATTCCGCAGATATGAATGTTGCTCTGATG
ACTTTTAGCCCTTGAGCTAGCAAAGGAGTATCAAATGTACGATTGGGTTA
GGGCCCTTCTCGATCCTACCGACATCGTTCAAAGTCCCTCGTCCGCGAAG
AAGCAAATTACCCCTCCCCCTCGGTTTGATTTGCCGCCGATCGAAGCCCC
GGCCATTCTCACTGCACCACGTCTCCGTAGGGGACGGTCCGCTTCTCCAA
GCAAGAAGTCGACCTCCCCACGCAAGCCCCGCCAGACTCGCGCCATGAAA
GAGGCCAACGCTGCGGCGACCAGTGCTGCCAACGCCAGCCTCCAGTCTTC
TTTGGACTTGACGGCTTCCACAGTGGAGTCGGAATCGGTCACCGGCACCG
TTCATCAGAGTGTGGAGGTGGACGACAACGAGAAGCCCGCTCCTACCCCG
AAGAAACCGGCATCAGCATCCAAGGCAAAGAGGACGGCTGCTCGGGTGGA
AGAGCCCGAGGAGAAGGAGGAGAAGGAACCTGAGAAGGTGAAGGTCGATG
TTGAGACCAATGCGGAAGCTGTTGACGAGGCCAAAACCACCCAAACCACC
GTTTCCGTTGAGATGCCTATCAGCCTTCCTGAGGCACCGTCTGCTGCCGA
TACTGAGCAGATGATTGCCAAGGCGAAAGAAATGGTAGAAGAAGCGGTCA
AGCTTCAGACCGAGACGGCAGAGCCATCGTCGGCCAAGGCAGCCCAGAAG
CGCAAGACGGAAGTGCTCAGCGAAGATGACGAGGAAGAAGATGAAGAAGC
CAAGACCCTCCGGGTGAAGAGGGCCAAGGTTCTGGAGGAGAAGCTGAAGC
AGGAGCGTGTGCGGAACCGTGCTCTTGTTGGTGTTACAGCTGCCTTTGCG
CTCGCGTAAGTCTTGCATGCCAAATGCTAAATCTCCCGTGCACATTGCTA
ACCTGCCTTGCAGAGCCTCTATTCCGTATTTCTTCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3897568..3899155+

>ATCC64974_108080-T1 ID=ATCC64974_108080-T1|Name=ATCC64974_108080-T1|organism=Aspergillus niger N402|type=CDS|length=6525bp|location=Sequence derived from alignment at OGUI01000017.1:3897568..3899155+ (Aspergillus niger N402)
ATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCCTTGCGGACGT
GGCTCCTGCTTACGATGAACTTCTCTCGCGCCGTCGTCTGGGAAAGACCA
ACCTCGCCGTGAAACCCACCCAGGTTGGCACGTCAAATGCGACAAAGCCT
GAAAACCTCGGCCCCTTCGAGTATGCACACTTGCGCGCGCCGCTGCCTAG
AGACCTCAAGGGCTCCGAGATTTTCCCCTCACACTCGCCTCAACAACATC
CCGAAACCTACTTTTTGATGAGACGTAGCAAAGATGGATTCGTCAGTGCT
ACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAAGCTCGATGAAGAACG
GTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGACTAGTGAAGATGAGA
TCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGCCCTTGAGCTAGCAAAG
GAGTATCAAATGTACGATTGGGTTAGGGCCCTTCTCGATCCTACCGACAT
CGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCCCTCCCCCTCGGT
TTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACTGCACCACGTCTC
CGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGACCTCCCCACGCAA
GCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTGCGGCGACCAGTG
CTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACGGCTTCCACAGTG
GAGTCGGAATCGGTCACCGGCACCGTTCATCAGAGTGTGGAGGTGGACGA
CAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCATCAGCATCCAAGG
CAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAAGGAGGAGAAG
GAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGCGGAAGCTGTTGA
CGAGGCCAAAACCACCCAAACCACCGTTTCCGTTGAGATGCCTATCAGCC
TTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAGATGATTGCCAAGGCG
AAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGAGACGGCAGAGCC
ATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAGTGCTCAGCGAAG
ATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGGGTGAAGAGGGCC
AAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGAACCGTGCTCT
TGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGCCTCTATTCCGTATTTCT
TCTAGATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCCTTGCG
GACGTGGCTCCTGCTTACGATGAACTTCTCTCGCGCCGTCGTCTGGGAAA
GACCAACCTCGCCGTGAAACCCACCCAGGTTGGCACGTCAAATGCGACAA
AGCCTGAAAACCTCGGCCCCTTCGAGTATGCACACTTGCGCGCGCCGCTG
CCTAGAGACCTCAAGGGCTCCGAGATTTTCCCCTCACACTCGCCTCAACA
ACATCCCGAAACCTACTTTTTGATGAGACGTAGCAAAGATGGATTCGTCA
GTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAAGCTCGATGAA
GAACGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGACTAGTGAAGA
TGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGCCCTTGAGCTAG
CAAAGGAGTATCAAATGTACGATTGGGTTAGGGCCCTTCTCGATCCTACC
GACATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCCCTCCCCC
TCGGTTTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACTGCACCAC
GTCTCCGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGACCTCCCCA
CGCAAGCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTGCGGCGAC
CAGTGCTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACGGCTTCCA
CAGTGGAGTCGGAATCGGTCACCGGCACCGTTCATCAGAGTGTGGAGGTG
GACGACAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCATCAGCATC
CAAGGCAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAAGGAGG
AGAAGGAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGCGGAAGCT
GTTGACGAGGCCAAAACCACCCAAACCACCGTTTCCGTTGAGATGCCTAT
CAGCCTTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAGATGATTGCCA
AGGCGAAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGAGACGGCA
GAGCCATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAGTGCTCAG
CGAAGATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGGGTGAAGA
GGGCCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGAACCGT
GCTCTTGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGCCTCTATTCCGTA
TTTCTTCTAGATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCTCATCC
TTGCGGACGTGGCTCCTGCTTACGATGAACTTCTCTCGCGCCGTCGTCTG
GGAAAGACCAACCTCGCCGTGAAACCCACCCAGGTTGGCACGTCAAATGC
GACAAAGCCTGAAAACCTCGGCCCCTTCGAGTATGCACACTTGCGCGCGC
CGCTGCCTAGAGACCTCAAGGGCTCCGAGATTTTCCCCTCACACTCGCCT
CAACAACATCCCGAAACCTACTTTTTGATGAGACGTAGCAAAGATGGATT
CGTCAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAAGCTCG
ATGAAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGACTAGT
GAAGATGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGCCCTTGA
GCTAGCAAAGGAGTATCAAATGTACGATTGGGTTAGGGCCCTTCTCGATC
CTACCGACATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTACCCCT
CCCCCTCGGTTTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTCACTGC
ACCACGTCTCCGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTCGACCT
CCCCACGCAAGCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACGCTGCG
GCGACCAGTGCTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTGACGGC
TTCCACAGTGGAGTCGGAATCGGTCACCGGCACCGTTCATCAGAGTGTGG
AGGTGGACGACAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGGCATCA
GCATCCAAGGCAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAGGAGAA
GGAGGAGAAGGAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAATGCGG
AAGCTGTTGACGAGGCCAAAACCACCCAAACCACCGTTTCCGTTGAGATG
CCTATCAGCCTTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAGATGAT
TGCCAAGGCGAAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGACCGAGA
CGGCAGAGCCATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGGAAGTG
CTCAGCGAAGATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTCCGGGT
GAAGAGGGCCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGTGCGGA
ACCGTGCTCTTGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGCCTCTATT
CCGTATTTCTTCTAGATGGTGCGCTCACTGCCGAAGAAAAACAACCCTCT
CATCCTTGCGGACGTGGCTCCTGCTTACGATGAACTTCTCTCGCGCCGTC
GTCTGGGAAAGACCAACCTCGCCGTGAAACCCACCCAGGTTGGCACGTCA
AATGCGACAAAGCCTGAAAACCTCGGCCCCTTCGAGTATGCACACTTGCG
CGCGCCGCTGCCTAGAGACCTCAAGGGCTCCGAGATTTTCCCCTCACACT
CGCCTCAACAACATCCCGAAACCTACTTTTTGATGAGACGTAGCAAAGAT
GGATTCGTCAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGGGCAAA
GCTCGATGAAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGGACGGAGA
CTAGTGAAGATGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGCTCGCC
CTTGAGCTAGCAAAGGAGTATCAAATGTACGATTGGGTTAGGGCCCTTCT
CGATCCTACCGACATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCAAATTA
CCCCTCCCCCTCGGTTTGATTTGCCGCCGATCGAAGCCCCGGCCATTCTC
ACTGCACCACGTCTCCGTAGGGGACGGTCCGCTTCTCCAAGCAAGAAGTC
GACCTCCCCACGCAAGCCCCGCCAGACTCGCGCCATGAAAGAGGCCAACG
CTGCGGCGACCAGTGCTGCCAACGCCAGCCTCCAGTCTTCTTTGGACTTG
ACGGCTTCCACAGTGGAGTCGGAATCGGTCACCGGCACCGTTCATCAGAG
TGTGGAGGTGGACGACAACGAGAAGCCCGCTCCTACCCCGAAGAAACCGG
CATCAGCATCCAAGGCAAAGAGGACGGCTGCTCGGGTGGAAGAGCCCGAG
GAGAAGGAGGAGAAGGAACCTGAGAAGGTGAAGGTCGATGTTGAGACCAA
TGCGGAAGCTGTTGACGAGGCCAAAACCACCCAAACCACCGTTTCCGTTG
AGATGCCTATCAGCCTTCCTGAGGCACCGTCTGCTGCCGATACTGAGCAG
ATGATTGCCAAGGCGAAAGAAATGGTAGAAGAAGCGGTCAAGCTTCAGAC
CGAGACGGCAGAGCCATCGTCGGCCAAGGCAGCCCAGAAGCGCAAGACGG
AAGTGCTCAGCGAAGATGACGAGGAAGAAGATGAAGAAGCCAAGACCCTC
CGGGTGAAGAGGGCCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAGCGTGT
GCGGAACCGTGCTCTTGTTGGTGTTACAGCTGCCTTTGCGCTCGCAGCCT
CTATTCCGTATTTCTTCTAGATGGTGCGCTCACTGCCGAAGAAAAACAAC
CCTCTCATCCTTGCGGACGTGGCTCCTGCTTACGATGAACTTCTCTCGCG
CCGTCGTCTGGGAAAGACCAACCTCGCCGTGAAACCCACCCAGGTTGGCA
CGTCAAATGCGACAAAGCCTGAAAACCTCGGCCCCTTCGAGTATGCACAC
TTGCGCGCGCCGCTGCCTAGAGACCTCAAGGGCTCCGAGATTTTCCCCTC
ACACTCGCCTCAACAACATCCCGAAACCTACTTTTTGATGAGACGTAGCA
AAGATGGATTCGTCAGTGCTACCGGAATGTTCAAGATTGCCTTCCCTTGG
GCAAAGCTCGATGAAGAACGGTCTGAGCGGGAGTATCTGAAGACCCGGAC
GGAGACTAGTGAAGATGAGATCGCCGGCAATGTTTGGATCTCGCCTCTGC
TCGCCCTTGAGCTAGCAAAGGAGTATCAAATGTACGATTGGGTTAGGGCC
CTTCTCGATCCTACCGACATCGTTCAAAGTCCCTCGTCCGCGAAGAAGCA
AATTACCCCTCCCCCTCGGTTTGATTTGCCGCCGATCGAAGCCCCGGCCA
TTCTCACTGCACCACGTCTCCGTAGGGGACGGTCCGCTTCTCCAAGCAAG
AAGTCGACCTCCCCACGCAAGCCCCGCCAGACTCGCGCCATGAAAGAGGC
CAACGCTGCGGCGACCAGTGCTGCCAACGCCAGCCTCCAGTCTTCTTTGG
ACTTGACGGCTTCCACAGTGGAGTCGGAATCGGTCACCGGCACCGTTCAT
CAGAGTGTGGAGGTGGACGACAACGAGAAGCCCGCTCCTACCCCGAAGAA
ACCGGCATCAGCATCCAAGGCAAAGAGGACGGCTGCTCGGGTGGAAGAGC
CCGAGGAGAAGGAGGAGAAGGAACCTGAGAAGGTGAAGGTCGATGTTGAG
ACCAATGCGGAAGCTGTTGACGAGGCCAAAACCACCCAAACCACCGTTTC
CGTTGAGATGCCTATCAGCCTTCCTGAGGCACCGTCTGCTGCCGATACTG
AGCAGATGATTGCCAAGGCGAAAGAAATGGTAGAAGAAGCGGTCAAGCTT
CAGACCGAGACGGCAGAGCCATCGTCGGCCAAGGCAGCCCAGAAGCGCAA
GACGGAAGTGCTCAGCGAAGATGACGAGGAAGAAGATGAAGAAGCCAAGA
CCCTCCGGGTGAAGAGGGCCAAGGTTCTGGAGGAGAAGCTGAAGCAGGAG
CGTGTGCGGAACCGTGCTCTTGTTGGTGTTACAGCTGCCTTTGCGCTCGC
AGCCTCTATTCCGTATTTCTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_108080ATCC64974_108080Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108080-T1ATCC64974_108080-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108080-T1.exon1ATCC64974_108080-T1.exon1Aspergillus niger N402exon
ATCC64974_108080-T1.exon2ATCC64974_108080-T1.exon2Aspergillus niger N402exon
ATCC64974_108080-T1.exon3ATCC64974_108080-T1.exon3Aspergillus niger N402exon
ATCC64974_108080-T1.exon4ATCC64974_108080-T1.exon4Aspergillus niger N402exon
ATCC64974_108080-T1.exon5ATCC64974_108080-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108080-T1.cdsATCC64974_108080-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR003163
DBxrefInterPro:IPR036887
DBxrefInterPro:IPR018004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3897568..3899155 +
Powered by Drupal