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ATCC64974_108230-T1, ATCC64974_108230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108230-T1
Unique NameATCC64974_108230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3936953..3937942-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108230-T1 ID=ATCC64974_108230-T1|Name=ATCC64974_108230-T1|organism=Aspergillus niger N402|type=mRNA|length=990bp|location=Sequence derived from alignment at OGUI01000017.1:3936953..3937942- (Aspergillus niger N402)
ATGCCATACATCAACACAGACCCCTGCTCCAAACCAAATCCCTCTCCGAA
CAATGGGTTCGAGAACCTCGTCCAAGATCTAAGTGACGCTCTGGGTCCGA
GTTCGGGTCTAGATTCCGATGACATTGATCCAATGGACATTCTGCGCTTA
ATGGAACGCTATGACTCGAATCCAGATGAATGGCTCCCCTTTGCGCTGGG
GGACTCGAAAAAGAATTACACAAGGAACCTCATCGACGAGGGCAATGGCA
AGAGCAATCTAGTGAGTTCCTCGTATCTTGCTTATGTCATGCACCTTTCG
TACAGTTGCCTAAAGACAAAGCCATTGGAGATCTGTACTGACAGAGTATG
TTCAAGCTCATTCTGGTCTGGAGTCCAGGAAAGGGAAGCGCAATACATGA
TCACGCTAATGCACACTGCGTCATGAAGGTACTATCATATTCTCCTTAGG
AATAAGTTATCCGTCTGCGAACTAAGCTAACCAACTATTCAAACAATCTA
ATGGCAGATCCTGAAAGGCTCTCTAAAAGAAACACTCTACGCCTGGCCAG
ACCAAGGCAAGCTTCAAAATGGAGAATCCTCTCCACCGCAAATAAAAAAG
GAGACTATATACGGTGAGAATCAGGTTACGTATATGTCCGACAAGGTTTG
TCTATCAGTCCCTGTGTCTTAAATAATTTACTGGTTTATACTATCACTGA
GTGAAGTATGGCTAATGCATGGGTCACGTCGTGCGTTTTACAGCTGGGTC
TTCATCGAATCTCGAACCCAGACCCTAATGATTATGCCGTATCATTGCAT
CGTAGGTTCCGCCGTCATTCTCGTTATGGCTGTTCTACGTGAGATTACAT
GCTAATATTGTGATTCATTGAAAGTATACACGCCTCCTAACGCAGCAACG
CACGGCTTCTCCATCTTCGACGATAAGACCGGCAAGGCCTGTCATATCAA
GACGTCGCATGTTTATTCGGTTCGGGGAGAGCGGTGCTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3936953..3937942-

>ATCC64974_108230-T1 ID=ATCC64974_108230-T1|Name=ATCC64974_108230-T1|organism=Aspergillus niger N402|type=CDS|length=3225bp|location=Sequence derived from alignment at OGUI01000017.1:3936953..3937942- (Aspergillus niger N402)
TATACACGCCTCCTAACGCAGCAACGCACGGCTTCTCCATCTTCGACGAT
AAGACCGGCAAGGCCTGTCATATCAAGACGTCGCATGTTTATTCGGTTCG
GGGAGAGCGGTGCTGACTGGGTCTTCATCGAATCTCGAACCCAGACCCTA
ATGATTATGCCGTATCATTGCATCATCCTGAAAGGCTCTCTAAAAGAAAC
ACTCTACGCCTGGCCAGACCAAGGCAAGCTTCAAAATGGAGAATCCTCTC
CACCGCAAATAAAAAAGGAGACTATATACGGTGAGAATCAGGTTACGTAT
ATGTCCGACAAGCTCATTCTGGTCTGGAGTCCAGGAAAGGGAAGCGCAAT
ACATGATCACGCTAATGCACACTGCGTCATGAAGATGCCATACATCAACA
CAGACCCCTGCTCCAAACCAAATCCCTCTCCGAACAATGGGTTCGAGAAC
CTCGTCCAAGATCTAAGTGACGCTCTGGGTCCGAGTTCGGGTCTAGATTC
CGATGACATTGATCCAATGGACATTCTGCGCTTAATGGAACGCTATGACT
CGAATCCAGATGAATGGCTCCCCTTTGCGCTGGGGGACTCGAAAAAGAAT
TACACAAGGAACCTCATCGACGAGGGCAATGGCAAGAGCAATCTATATAC
ACGCCTCCTAACGCAGCAACGCACGGCTTCTCCATCTTCGACGATAAGAC
CGGCAAGGCCTGTCATATCAAGACGTCGCATGTTTATTCGGTTCGGGGAG
AGCGGTGCTGACTGGGTCTTCATCGAATCTCGAACCCAGACCCTAATGAT
TATGCCGTATCATTGCATCATCCTGAAAGGCTCTCTAAAAGAAACACTCT
ACGCCTGGCCAGACCAAGGCAAGCTTCAAAATGGAGAATCCTCTCCACCG
CAAATAAAAAAGGAGACTATATACGGTGAGAATCAGGTTACGTATATGTC
CGACAAGCTCATTCTGGTCTGGAGTCCAGGAAAGGGAAGCGCAATACATG
ATCACGCTAATGCACACTGCGTCATGAAGATGCCATACATCAACACAGAC
CCCTGCTCCAAACCAAATCCCTCTCCGAACAATGGGTTCGAGAACCTCGT
CCAAGATCTAAGTGACGCTCTGGGTCCGAGTTCGGGTCTAGATTCCGATG
ACATTGATCCAATGGACATTCTGCGCTTAATGGAACGCTATGACTCGAAT
CCAGATGAATGGCTCCCCTTTGCGCTGGGGGACTCGAAAAAGAATTACAC
AAGGAACCTCATCGACGAGGGCAATGGCAAGAGCAATCTATATACACGCC
TCCTAACGCAGCAACGCACGGCTTCTCCATCTTCGACGATAAGACCGGCA
AGGCCTGTCATATCAAGACGTCGCATGTTTATTCGGTTCGGGGAGAGCGG
TGCTGACTGGGTCTTCATCGAATCTCGAACCCAGACCCTAATGATTATGC
CGTATCATTGCATCATCCTGAAAGGCTCTCTAAAAGAAACACTCTACGCC
TGGCCAGACCAAGGCAAGCTTCAAAATGGAGAATCCTCTCCACCGCAAAT
AAAAAAGGAGACTATATACGGTGAGAATCAGGTTACGTATATGTCCGACA
AGCTCATTCTGGTCTGGAGTCCAGGAAAGGGAAGCGCAATACATGATCAC
GCTAATGCACACTGCGTCATGAAGATGCCATACATCAACACAGACCCCTG
CTCCAAACCAAATCCCTCTCCGAACAATGGGTTCGAGAACCTCGTCCAAG
ATCTAAGTGACGCTCTGGGTCCGAGTTCGGGTCTAGATTCCGATGACATT
GATCCAATGGACATTCTGCGCTTAATGGAACGCTATGACTCGAATCCAGA
TGAATGGCTCCCCTTTGCGCTGGGGGACTCGAAAAAGAATTACACAAGGA
ACCTCATCGACGAGGGCAATGGCAAGAGCAATCTATATACACGCCTCCTA
ACGCAGCAACGCACGGCTTCTCCATCTTCGACGATAAGACCGGCAAGGCC
TGTCATATCAAGACGTCGCATGTTTATTCGGTTCGGGGAGAGCGGTGCTG
ACTGGGTCTTCATCGAATCTCGAACCCAGACCCTAATGATTATGCCGTAT
CATTGCATCATCCTGAAAGGCTCTCTAAAAGAAACACTCTACGCCTGGCC
AGACCAAGGCAAGCTTCAAAATGGAGAATCCTCTCCACCGCAAATAAAAA
AGGAGACTATATACGGTGAGAATCAGGTTACGTATATGTCCGACAAGCTC
ATTCTGGTCTGGAGTCCAGGAAAGGGAAGCGCAATACATGATCACGCTAA
TGCACACTGCGTCATGAAGATGCCATACATCAACACAGACCCCTGCTCCA
AACCAAATCCCTCTCCGAACAATGGGTTCGAGAACCTCGTCCAAGATCTA
AGTGACGCTCTGGGTCCGAGTTCGGGTCTAGATTCCGATGACATTGATCC
AATGGACATTCTGCGCTTAATGGAACGCTATGACTCGAATCCAGATGAAT
GGCTCCCCTTTGCGCTGGGGGACTCGAAAAAGAATTACACAAGGAACCTC
ATCGACGAGGGCAATGGCAAGAGCAATCTATATACACGCCTCCTAACGCA
GCAACGCACGGCTTCTCCATCTTCGACGATAAGACCGGCAAGGCCTGTCA
TATCAAGACGTCGCATGTTTATTCGGTTCGGGGAGAGCGGTGCTGACTGG
GTCTTCATCGAATCTCGAACCCAGACCCTAATGATTATGCCGTATCATTG
CATCATCCTGAAAGGCTCTCTAAAAGAAACACTCTACGCCTGGCCAGACC
AAGGCAAGCTTCAAAATGGAGAATCCTCTCCACCGCAAATAAAAAAGGAG
ACTATATACGGTGAGAATCAGGTTACGTATATGTCCGACAAGCTCATTCT
GGTCTGGAGTCCAGGAAAGGGAAGCGCAATACATGATCACGCTAATGCAC
ACTGCGTCATGAAGATGCCATACATCAACACAGACCCCTGCTCCAAACCA
AATCCCTCTCCGAACAATGGGTTCGAGAACCTCGTCCAAGATCTAAGTGA
CGCTCTGGGTCCGAGTTCGGGTCTAGATTCCGATGACATTGATCCAATGG
ACATTCTGCGCTTAATGGAACGCTATGACTCGAATCCAGATGAATGGCTC
CCCTTTGCGCTGGGGGACTCGAAAAAGAATTACACAAGGAACCTCATCGA
CGAGGGCAATGGCAAGAGCAATCTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDO1ATCC64974_108230Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108230-T1ATCC64974_108230-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108230-T1.cdsATCC64974_108230-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108230-T1.exon5ATCC64974_108230-T1.exon5Aspergillus niger N402exon
ATCC64974_108230-T1.exon4ATCC64974_108230-T1.exon4Aspergillus niger N402exon
ATCC64974_108230-T1.exon3ATCC64974_108230-T1.exon3Aspergillus niger N402exon
ATCC64974_108230-T1.exon2ATCC64974_108230-T1.exon2Aspergillus niger N402exon
ATCC64974_108230-T1.exon1ATCC64974_108230-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR010300
DBxrefInterPro:IPR014710
DBxrefPFAM:PF05995
ProductCysteine dioxygenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3936953..3937942 -
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