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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3955466..3957260- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108270-T1 ID=ATCC64974_108270-T1|Name=ATCC64974_108270-T1|organism=Aspergillus niger N402|type=mRNA|length=1795bp|location=Sequence derived from alignment at OGUI01000017.1:3955466..3957260- (Aspergillus niger N402)
ATGACCAGCGACCCTCTCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAA
AGCTGGTCCAACCACCTCCAGCTCGAAGTCGACTGCTGTGCCCTCATCTC
CGACTCTGCAGTCTTTTGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAA
TATGCTAGTCGAGAGGATCCGGTTAATGCGACGAGCGACAAGGCGACGAT
TGCTCTAATTCGACGCATCCTATGTCCCCAAGCTGGTAACCATGGGGGTG
CCACTACTCCTCAACCTCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCA
AATGAGGTAGATCGTCAGCTTTATGCGCTTATTGCCATCATCGTCAAAGA
GTTTGTGTTCACCTGGTACTCAAAGATCACTTCGGATCAGGTGCTCGTGA
GCGAACTCCTTCAGGTCATTGCGCACTGCACCCGCGCTCTTGAGCAGAGG
TTGCGCGAAATCGATGTTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCT
CGTTGAGAGGCACGTTACATGTAAGACCTTGCGTCCTGTCCAACGTCCAC
TAAGGGTTGCATGAGTGCATGAGCTGACCGCGCCCTCGGTCGTCCATAGC
ATATAGACTAGCAAAGCAGCAATCAGCACAATCTTCGATATCTCCTCCGC
TCCGCGAGATTTATCATGCTCTAAATCCGCATCCAGGCCTCTCACCGATC
CCCGACCCATCAGATGCTCAAGCTGTTGCGCAGCAAAGAGAAAACGAATC
AATTTATCGACAACTATTGGTCCACGGCATGTTAGCGGTGCTACTCCCCA
CGGAGGACCTGGAAAATGCTTCTCTGCGAACTCTGCTCGGTGACATCCTG
GCAGATCTTGTGCTGGGCAATGCAGTGGCCGGGAAAATCAGCGAAGGATG
GTTCTTGTGGGACAGTATCACGAAGGTGGTCGACAGGGTAGGGCGCAACG
AACAGGAGGAGGATGTAGCGACTGCAACCCTGGGTCAACGATCCCGACTT
CACAAGTACGGTCTCCTCTCTCAAGAAGCGTTCACGGAAGGTCATTCGTC
GTCCCACGTCCAAGTGCCAGTTCCCGACTGGATCTGGCAAGCGCTACAAT
ATGCCTACATGATCTACGTGACTTTACGTTTCATTGTGATCGGCCTGTTT
CGCGTTGCATCCGCACCTCCGGTTACTGCGTCCCTGACACCATGCCCTCC
AACCAGCAACGCGGACGGAACCCCCTCGTGCGCAACCTCCAAGAAGCGCC
CGGTGCTGGACTACCGGTTGTATGGCATGGTCTCGCAAGTGATGGATGTG
CCGCAGCGGATGCCTTGGCTGTGTGGAATGCTCGCACTGATCCAGTATCT
GATCCTGGCCGGTCCAGGTAGATTGGGTGATACGGATAGTGTTCTTGATA
GGTGAGTCGCACATCCCGATTTGAAATTTCTCAAACCCTCCCCCCCTCCA
TCATCACTCGCAAGCAATCTCCTACAGGCCACCGATGGCCGTTGGATTCA
GATGGGTGTTTCGAAGCGCCAGACGGCGCGACCCTAAGGGGCATGTGGTG
TCCCTACTGTGGAGAAGCGGTACGGTTGGATCTCCGAACCATGATCTACA
CATGTGTTTGCGAGAGTGACGGTCAGAGAGACTGCTGGTGCGGTGGTTGA
GAAGCAAGCCATTGGAGTAAAGACGGCGGGCCAGCAGGAGCATGCAGGTG
GGATGCGCATTGCGCGCATGCTGCAACGATCACTTGATCGCCTGGTGGAT
GGCTGCCCCCGCCCGCGCTCGTCTTCTCGACTCTCATTCGTCTAG back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3955466..3957260- >ATCC64974_108270-T1 ID=ATCC64974_108270-T1|Name=ATCC64974_108270-T1|organism=Aspergillus niger N402|type=CDS|length=4212bp|location=Sequence derived from alignment at OGUI01000017.1:3955466..3957260- (Aspergillus niger N402)
AGAGACTGCTGGTGCGGTGGTTGAGAAGCAAGCCATTGGAGTAAAGACGG
CGGGCCAGCAGGAGCATGCAGGTGGGATGCGCATTGCGCGCATGCTGCAA
CGATCACTTGATCGCCTGGTGGATGGCTGCCCCCGCCCGCGCTCGTCTTC
TCGACTCTCATTCGTCTAGGCCTCTCACCGATCCCCGACCCATCAGATGC
TCAAGCTGTTGCGCAGCAAAGAGAAAACGAATCAATTTATCGACAACTAT
TGGTCCACGGCATGTTAGCGGTGCTACTCCCCACGGAGGACCTGGAAAAT
GCTTCTCTGCGAACTCTGCTCGGTGACATCCTGGCAGATCTTGTGCTGGG
CAATGCAGTGGCCGGGAAAATCAGCGAAGGATGGTTCTTGTGGGACAGTA
TCACGAAGGTGGTCGACAGGGTAGGGCGCAACGAACAGGAGGAGGATGTA
GCGACTGCAACCCTGGGTCAACGATCCCGACTTCACAAGTACGGTCTCCT
CTCTCAAGAAGCGTTCACGGAAGGTCATTCGTCGTCCCACGTCCAAGTGC
CAGTTCCCGACTGGATCTGGCAAGCGCTACAATATGCCTACATGATCTAC
GTGACTTTACGTTTCATTGTGATCGGCCTGTTTCGCGTTGCATCCGCACC
TCCGGTTACTGCGTCCCTGACACCATGCCCTCCAACCAGCAACGCGGACG
GAACCCCCTCGTGCGCAACCTCCAAGAAGCGCCCGGTGCTGGACTACCGG
TTGTATGGCATGGTCTCGCAAGTGATGGATGTGCCGCAGCGGATGCCTTG
GCTGTGTGGAATGCTCGCACTGATCCAGTATCTGATCCTGGCCGGTCCAG
GTAGATTGGGTGATACGGATAGTGTTCTTGATAGATGACCAGCGACCCTC
TCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAAAGCTGGTCCAACCACC
TCCAGCTCGAAGTCGACTGCTGTGCCCTCATCTCCGACTCTGCAGTCTTT
TGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAATATGCTAGTCGAGAGG
ATCCGGTTAATGCGACGAGCGACAAGGCGACGATTGCTCTAATTCGACGC
ATCCTATGTCCCCAAGCTGGTAACCATGGGGGTGCCACTACTCCTCAACC
TCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCAAATGAGGTAGATCGTC
AGCTTTATGCGCTTATTGCCATCATCGTCAAAGAGTTTGTGTTCACCTGG
TACTCAAAGATCACTTCGGATCAGGTGCTCGTGAGCGAACTCCTTCAGGT
CATTGCGCACTGCACCCGCGCTCTTGAGCAGAGGTTGCGCGAAATCGATG
TTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCTCGTTGAGAGGCACGTT
ACATAGAGACTGCTGGTGCGGTGGTTGAGAAGCAAGCCATTGGAGTAAAG
ACGGCGGGCCAGCAGGAGCATGCAGGTGGGATGCGCATTGCGCGCATGCT
GCAACGATCACTTGATCGCCTGGTGGATGGCTGCCCCCGCCCGCGCTCGT
CTTCTCGACTCTCATTCGTCTAGGCCTCTCACCGATCCCCGACCCATCAG
ATGCTCAAGCTGTTGCGCAGCAAAGAGAAAACGAATCAATTTATCGACAA
CTATTGGTCCACGGCATGTTAGCGGTGCTACTCCCCACGGAGGACCTGGA
AAATGCTTCTCTGCGAACTCTGCTCGGTGACATCCTGGCAGATCTTGTGC
TGGGCAATGCAGTGGCCGGGAAAATCAGCGAAGGATGGTTCTTGTGGGAC
AGTATCACGAAGGTGGTCGACAGGGTAGGGCGCAACGAACAGGAGGAGGA
TGTAGCGACTGCAACCCTGGGTCAACGATCCCGACTTCACAAGTACGGTC
TCCTCTCTCAAGAAGCGTTCACGGAAGGTCATTCGTCGTCCCACGTCCAA
GTGCCAGTTCCCGACTGGATCTGGCAAGCGCTACAATATGCCTACATGAT
CTACGTGACTTTACGTTTCATTGTGATCGGCCTGTTTCGCGTTGCATCCG
CACCTCCGGTTACTGCGTCCCTGACACCATGCCCTCCAACCAGCAACGCG
GACGGAACCCCCTCGTGCGCAACCTCCAAGAAGCGCCCGGTGCTGGACTA
CCGGTTGTATGGCATGGTCTCGCAAGTGATGGATGTGCCGCAGCGGATGC
CTTGGCTGTGTGGAATGCTCGCACTGATCCAGTATCTGATCCTGGCCGGT
CCAGGTAGATTGGGTGATACGGATAGTGTTCTTGATAGATGACCAGCGAC
CCTCTCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAAAGCTGGTCCAAC
CACCTCCAGCTCGAAGTCGACTGCTGTGCCCTCATCTCCGACTCTGCAGT
CTTTTGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAATATGCTAGTCGA
GAGGATCCGGTTAATGCGACGAGCGACAAGGCGACGATTGCTCTAATTCG
ACGCATCCTATGTCCCCAAGCTGGTAACCATGGGGGTGCCACTACTCCTC
AACCTCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCAAATGAGGTAGAT
CGTCAGCTTTATGCGCTTATTGCCATCATCGTCAAAGAGTTTGTGTTCAC
CTGGTACTCAAAGATCACTTCGGATCAGGTGCTCGTGAGCGAACTCCTTC
AGGTCATTGCGCACTGCACCCGCGCTCTTGAGCAGAGGTTGCGCGAAATC
GATGTTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCTCGTTGAGAGGCA
CGTTACATAGAGACTGCTGGTGCGGTGGTTGAGAAGCAAGCCATTGGAGT
AAAGACGGCGGGCCAGCAGGAGCATGCAGGTGGGATGCGCATTGCGCGCA
TGCTGCAACGATCACTTGATCGCCTGGTGGATGGCTGCCCCCGCCCGCGC
TCGTCTTCTCGACTCTCATTCGTCTAGGCCTCTCACCGATCCCCGACCCA
TCAGATGCTCAAGCTGTTGCGCAGCAAAGAGAAAACGAATCAATTTATCG
ACAACTATTGGTCCACGGCATGTTAGCGGTGCTACTCCCCACGGAGGACC
TGGAAAATGCTTCTCTGCGAACTCTGCTCGGTGACATCCTGGCAGATCTT
GTGCTGGGCAATGCAGTGGCCGGGAAAATCAGCGAAGGATGGTTCTTGTG
GGACAGTATCACGAAGGTGGTCGACAGGGTAGGGCGCAACGAACAGGAGG
AGGATGTAGCGACTGCAACCCTGGGTCAACGATCCCGACTTCACAAGTAC
GGTCTCCTCTCTCAAGAAGCGTTCACGGAAGGTCATTCGTCGTCCCACGT
CCAAGTGCCAGTTCCCGACTGGATCTGGCAAGCGCTACAATATGCCTACA
TGATCTACGTGACTTTACGTTTCATTGTGATCGGCCTGTTTCGCGTTGCA
TCCGCACCTCCGGTTACTGCGTCCCTGACACCATGCCCTCCAACCAGCAA
CGCGGACGGAACCCCCTCGTGCGCAACCTCCAAGAAGCGCCCGGTGCTGG
ACTACCGGTTGTATGGCATGGTCTCGCAAGTGATGGATGTGCCGCAGCGG
ATGCCTTGGCTGTGTGGAATGCTCGCACTGATCCAGTATCTGATCCTGGC
CGGTCCAGGTAGATTGGGTGATACGGATAGTGTTCTTGATAGATGACCAG
CGACCCTCTCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAAAGCTGGTC
CAACCACCTCCAGCTCGAAGTCGACTGCTGTGCCCTCATCTCCGACTCTG
CAGTCTTTTGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAATATGCTAG
TCGAGAGGATCCGGTTAATGCGACGAGCGACAAGGCGACGATTGCTCTAA
TTCGACGCATCCTATGTCCCCAAGCTGGTAACCATGGGGGTGCCACTACT
CCTCAACCTCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCAAATGAGGT
AGATCGTCAGCTTTATGCGCTTATTGCCATCATCGTCAAAGAGTTTGTGT
TCACCTGGTACTCAAAGATCACTTCGGATCAGGTGCTCGTGAGCGAACTC
CTTCAGGTCATTGCGCACTGCACCCGCGCTCTTGAGCAGAGGTTGCGCGA
AATCGATGTTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCTCGTTGAGA
GGCACGTTACAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108270-T1 | ATCC64974_108270-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003114 |
| DBxref | PFAM:PF02194 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3955466..3957260 - |
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