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ATCC64974_108290-T1, ATCC64974_108290-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108290-T1
Unique NameATCC64974_108290-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3959239..3960445-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108290-T1 ID=ATCC64974_108290-T1|Name=ATCC64974_108290-T1|organism=Aspergillus niger N402|type=mRNA|length=1207bp|location=Sequence derived from alignment at OGUI01000017.1:3959239..3960445- (Aspergillus niger N402)
ATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGGCT
CTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAGTA
CTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTATGC
AAGAGATTTCAAGGCTACGAAGCAGAGTACATATCCACCAACCCTGTTGG
GCAAGCCATGCAGCTAACCTCGAGTGACCAGTGACATTGAGCACATATGG
CAAATGGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTC
CGCCATTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGAC
TTGGTGTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTG
TCCGTCTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGC
CGGGAAAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCA
CTGAGGACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTT
GAACGACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTT
CCACGGCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGG
AGCCGCACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCC
GAAGCGATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGG
CGAGCGTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGA
GCGTCGACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAG
CTACGACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCC
GCATTGCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACT
TGGCGACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTAT
AATACGGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAG
TGTGTTCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGAT
TGGGGATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCT
GAACCTTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGA
GTGGTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3959239..3960445-

>ATCC64974_108290-T1 ID=ATCC64974_108290-T1|Name=ATCC64974_108290-T1|organism=Aspergillus niger N402|type=CDS|length=2304bp|location=Sequence derived from alignment at OGUI01000017.1:3959239..3960445- (Aspergillus niger N402)
TGACATTGAGCACATATGGCAAATGGCCTGGCGTCTGGGCTTCTACCGCG
GGGGCCCGGTCTTCATGTCCGCCATTTCAGGAATTGACATCGCACTCTGG
GATCTGAAGGGCCGTCGACTTGGTGTCCCCATCTACCAGCTCCTCGGAGG
CAAAGTCCGGAACAAACTGTCCGTCTATGCATGGATTGGAGGAGACCGGC
CCTCCGATGTCGAAGCGGCCGGGAAAGCTCGTCTCGCGCAGGGCTTCAAA
GCCATTAAGATGAATGCCACTGAGGACATCAACTGGCTCGATTCCCCCCG
TGCGTTGGACTCCTCCGTTGAACGACTGAAAACCGTCAAAGCTCTCGGCT
TAGACGCAGCCCTCGACTTCCACGGCCGCCTTCACAAACCAATGGCCAAA
CAGCTCGCCAAAGCCCTGGAGCCGCACCGCCCTCTTTTCCTGGAGGAGCC
GCTCCTCTCTGAACACCCCGAAGCGATCAAGCAGCTATCAGATCAAGTTT
CTTGCCCTATTGCCCTTGGCGAGCGTCTCTACAGCCGCTGGGACGTTAAA
CGCTTCCTGGAAGACGCGAGCGTCGACATTCTTCAACCTGATATCGCTCA
CTGCGGAGGCATCTCCGAGCTACGACGTATAGCGTCCATGGCGGAAACGT
ACGATGTTGCGATTGCCCCGCATTGCCCCCTGGGGTCCATTGCTTTGGCG
GCATGTATGCAAGTGGACTTGGCGACCCCTAACTTCGTCATTCAAGAGAT
GAGCCTGGGGATGCACTATAATACGGAAGCGGGCGAATATGATATTACTA
GCTATGTCAAGGATCCCAGTGTGTTCGCCGTTAAGGATGGATACGTGGAT
GCTTTGACGGCACCGGGATTGGGGATTGAAGTGAACGAAGAGCTGGTCAG
GCAGTTGGCGGTCAATTCTGAACCTTGGCCGCCTAAGGAATTCTTTGGAC
CTGATGGAGGGATCCGGGAGTGGTAGATGGTCAAGATCAAGTCTATCGAG
TACTTCCGCGTCCCTCCCCGCTGGCTCTTCGTTAAGATCGTCGACGAAGA
TGGCCAATGCGGTTGGGGCGAAAGTACTTTAGAAGGCCATACCGAGGCCG
TCGAAGGCACATTGAATGCACTATGCAAGAGATTTCAAGGCTACGAAGCA
GATGACATTGAGCACATATGGCAAATGGCCTGGCGTCTGGGCTTCTACCG
CGGGGGCCCGGTCTTCATGTCCGCCATTTCAGGAATTGACATCGCACTCT
GGGATCTGAAGGGCCGTCGACTTGGTGTCCCCATCTACCAGCTCCTCGGA
GGCAAAGTCCGGAACAAACTGTCCGTCTATGCATGGATTGGAGGAGACCG
GCCCTCCGATGTCGAAGCGGCCGGGAAAGCTCGTCTCGCGCAGGGCTTCA
AAGCCATTAAGATGAATGCCACTGAGGACATCAACTGGCTCGATTCCCCC
CGTGCGTTGGACTCCTCCGTTGAACGACTGAAAACCGTCAAAGCTCTCGG
CTTAGACGCAGCCCTCGACTTCCACGGCCGCCTTCACAAACCAATGGCCA
AACAGCTCGCCAAAGCCCTGGAGCCGCACCGCCCTCTTTTCCTGGAGGAG
CCGCTCCTCTCTGAACACCCCGAAGCGATCAAGCAGCTATCAGATCAAGT
TTCTTGCCCTATTGCCCTTGGCGAGCGTCTCTACAGCCGCTGGGACGTTA
AACGCTTCCTGGAAGACGCGAGCGTCGACATTCTTCAACCTGATATCGCT
CACTGCGGAGGCATCTCCGAGCTACGACGTATAGCGTCCATGGCGGAAAC
GTACGATGTTGCGATTGCCCCGCATTGCCCCCTGGGGTCCATTGCTTTGG
CGGCATGTATGCAAGTGGACTTGGCGACCCCTAACTTCGTCATTCAAGAG
ATGAGCCTGGGGATGCACTATAATACGGAAGCGGGCGAATATGATATTAC
TAGCTATGTCAAGGATCCCAGTGTGTTCGCCGTTAAGGATGGATACGTGG
ATGCTTTGACGGCACCGGGATTGGGGATTGAAGTGAACGAAGAGCTGGTC
AGGCAGTTGGCGGTCAATTCTGAACCTTGGCCGCCTAAGGAATTCTTTGG
ACCTGATGGAGGGATCCGGGAGTGGTAGATGGTCAAGATCAAGTCTATCG
AGTACTTCCGCGTCCCTCCCCGCTGGCTCTTCGTTAAGATCGTCGACGAA
GATGGCCAATGCGGTTGGGGCGAAAGTACTTTAGAAGGCCATACCGAGGC
CGTCGAAGGCACATTGAATGCACTATGCAAGAGATTTCAAGGCTACGAAG
CAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008869galactonate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0009063cellular amino acid catabolic process
GO:0034194D-galactonate catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_108290ATCC64974_108290Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108290-T1ATCC64974_108290-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108290-T1.cdsATCC64974_108290-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108290-T1.exon2ATCC64974_108290-T1.exon2Aspergillus niger N402exon
ATCC64974_108290-T1.exon1ATCC64974_108290-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR018110
DBxrefInterPro:IPR023592
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3959239..3960445 -
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