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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3964078..3964703- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108310-T1 ID=ATCC64974_108310-T1|Name=ATCC64974_108310-T1|organism=Aspergillus niger N402|type=mRNA|length=626bp|location=Sequence derived from alignment at OGUI01000017.1:3964078..3964703- (Aspergillus niger N402)
ATGGTGCGCCCACCCCCTTTCCTTCCTCCCCCCTCAATATACACAACAAC
ACCACCACCACCACCAACAATATACTAACAATGGATATTAAATGAATACA
GTCGGACGGAGAAGAGACCCAATCCAACCCCGTTGTCGCCGCCGATGAGG
TCGAGGTTTCGGCCGACGCTGGCGCCGGTGGCCAGATGTCCGTCCTGGAT
GCCCTGAAGGGAGTTCTCCGTATCTCTCTCATCCACGACGGACTTGCCCG
TGGTCTGCGCGAGGCCGCTAAGGCCCTGGACCGTCGTCAGGCTCACATGT
GTGTCCTGAACGAGGGCTGCGAGGAGGAGGCCTACAAGAAGCTTGTTGTG
GCTCTTTGCTCCGAGCACAAGATCCCCCTCATCAAGGTCCCCGATGGAAA
GATGCTTGGCGAGTGGGTTGGTCTTTGTAAGTACCCTTTGGTTCCTTTGA
AGATTTGACCGTGTGGGTGATGTGTTTTGCTAATTGGGGTTTGTGGTATA
GGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTG
CGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCC
TTAACTACTTCCAGACTGAGCAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3964078..3964703- >ATCC64974_108310-T1 ID=ATCC64974_108310-T1|Name=ATCC64974_108310-T1|organism=Aspergillus niger N402|type=CDS|length=1359bp|location=Sequence derived from alignment at OGUI01000017.1:3964078..3964703- (Aspergillus niger N402)
GCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTGC
GTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCCT
TAACTACTTCCAGACTGAGCAGTAATCGGACGGAGAAGAGACCCAATCCA
ACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCTGGCGCC
GGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCGTATCTC
TCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTAAGGCCC
TGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGCGAGGAG
GAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAAGATCCC
CCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGTGGGTTGGTCTTT
ATGGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCT
TGCGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCT
CCTTAACTACTTCCAGACTGAGCAGTAATCGGACGGAGAAGAGACCCAAT
CCAACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCTGGC
GCCGGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCGTAT
CTCTCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTAAGG
CCCTGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGCGAG
GAGGAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAAGAT
CCCCCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGTGGGTTGGTC
TTTATGGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGC
TCTTGCGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGT
CCTCCTTAACTACTTCCAGACTGAGCAGTAATCGGACGGAGAAGAGACCC
AATCCAACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCT
GGCGCCGGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCG
TATCTCTCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTA
AGGCCCTGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGC
GAGGAGGAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAA
GATCCCCCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGTGGGTTG
GTCTTTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108310-T1 | ATCC64974_108310-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265CN0 |
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR000530 |
| DBxref | PFAM:PF01248 |
| Product | 40S ribosomal protein S12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3964078..3964703 - |
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