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ATCC64974_108450-T1, ATCC64974_108450-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108450-T1
Unique NameATCC64974_108450-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4002820..4003938-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108450-T1 ID=ATCC64974_108450-T1|Name=ATCC64974_108450-T1|organism=Aspergillus niger N402|type=mRNA|length=1119bp|location=Sequence derived from alignment at OGUI01000017.1:4002820..4003938- (Aspergillus niger N402)
ATGGGTGGTGTCACCGTTCGCGATGTCGACGTAAGTCATGTCATGTCAAC
TTTTGGAGATTGGTTGGTCGGTGCGGAATGGATGGGATATATGGCATGGC
ATGGTATGGCACGGCACGATCAGGACAAAATGAGAAGAAAAGAACGACAG
GAATGGGAAATACACATGGTATCGGCATTCAACGGAGCAGAAATCGACAT
TTTGATATCGAATTTGGGCGCATGCAGCAAAGCAAGCAAGGCTGGGTACA
TATACTCTGGGCATGAGATGTGATGAGTTTATGGGCTTGGAATGGGAATA
CGCAATGCACGACTACCACGATTGTGTACTCCAGCCATATATTATGGAAT
ATGGGAATTCTGGATGAAATGGATGTTATGGAGTCAGGAACGAACTGGAA
TTCCTGCCGCCGCGACACGCAGAGAAATGTCCAGATTTGCCGATACGTGC
CGTGCCATGCTATATGCCATATCATGCCTGAATGCGCACCTGCCAGACAA
TCTTCAATACACGATGCCTGTGGACGGATCAGCTAACAGGTTTCCTTTTC
CATGGTTATAGGCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAG
CGTCAGGGAAAGCTCCCCATTCCTGGTTCGTGCACACCGGATTTCATCGA
AAAGTCGTAACAATCAGATCAAAACTAATACGGTTATTAGGATGGGTTGA
CACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACT
GGTACGACAACTGCCATTGATCCAATACTTCGAAAAAAAAAAAAAAAAAA
AACAGCGTGATTAATAGAAATCTGCAATAGGTACTACGTCCGCGCCGCTG
CCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTCTC
CGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCACCA
CGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGAGA
AGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCACC
CAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGACGA
GGAGGAGGACGAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:4002820..4003938-

>ATCC64974_108450-T1 ID=ATCC64974_108450-T1|Name=ATCC64974_108450-T1|organism=Aspergillus niger N402|type=CDS|length=1776bp|location=Sequence derived from alignment at OGUI01000017.1:4002820..4003938- (Aspergillus niger N402)
GTACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGA
CCGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGC
GGCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAA
GGTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGA
AGGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATC
GCCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGAC
ACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTG
GCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAA
GCTCCCCATTCCTGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTA
CGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCG
GTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCC
CGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCAT
CCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTG
GCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAG
ACCACCGTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTC
AAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAG
AAGTTCATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCC
CATTCCTGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTACGTCCG
CGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTG
GCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCC
GCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTC
CCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCC
GCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACC
GTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTCAAGACC
TCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAGAAGTTC
ATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCC
TGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTACGTCCGCGCCGC
TGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTC
TCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCAC
CACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGA
GAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCA
CCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGAC
GAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTCAAGACCTCCTGC
TCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAGAAGTTCATCGCT
GCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGATGG
GTGGTGTCACCGTTCGCGATGTCGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS19ATCC64974_108450Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108450-T1ATCC64974_108450-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108450-T1.cdsATCC64974_108450-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108450-T1.exon4ATCC64974_108450-T1.exon4Aspergillus niger N402exon
ATCC64974_108450-T1.exon3ATCC64974_108450-T1.exon3Aspergillus niger N402exon
ATCC64974_108450-T1.exon2ATCC64974_108450-T1.exon2Aspergillus niger N402exon
ATCC64974_108450-T1.exon1ATCC64974_108450-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR038111
DBxrefInterPro:IPR001266
DBxrefPFAM:PF01090
Product40S ribosomal protein S19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4002820..4003938 -
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