You are here

Home

ATCC64974_108540-T1, ATCC64974_108540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108540-T1
Unique NameATCC64974_108540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4029896..4030841+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108540-T1 ID=ATCC64974_108540-T1|Name=ATCC64974_108540-T1|organism=Aspergillus niger N402|type=mRNA|length=946bp|location=Sequence derived from alignment at OGUI01000017.1:4029896..4030841+ (Aspergillus niger N402)
ATGGAATTCACTCTTGAGCCCAATCGACCAATGAAGCATGTCGACCGTAA
AGCCCTGTACACCCGTCTAGAGGCGCGCATCACTTACCTGCGAGACTTCC
TGGACTTCAATTCAAGTTCGTCCACTTGCAACCTCGTTGGCTTCAATCAT
CAACTAACCGCATGAGCGTAGGTGACGTTGAGGCATTGGTGGCAGGCTCC
AAGTATATCAAGGCCCTGATCCCTGCCGTGGTCAACATCGTCTATAAGAA
ACTTCTCGAGTCCGACATCACCGCTCGTGCCTTCCACACGAGAGATACCG
CCGACGATACCCCCGTCGAGGAGTTCTTCACTGAAGAAAGCCCCCAGATC
CAACGTCGCAAGATGTTTTTGCGTTGGTACTTGATTAAGCTGTGTTCCGA
CCCTTCTCAGATGGAATTCTGGCGGTACTTGAACAAAGTTGGGTATGTCT
TCCGATCTCTTTGCTGGTCAGTGTATCCAAGGTATCACGTGATACTAACG
GTTATAGAATGATGCACACTGCCCAGGAACGTCTGTACTCGCTCAACATC
GAATACATCCATATCGGCGCTTGCCTCGGATTCATTCAAGATATCTTCAC
CGAAGCCCTCATGTCACATCCTCACCTATCGCTCCCTCGCAAGACCGCCC
TGGTTCGTGCCATCAGCAAGATCATCTGGATCCAGAACGACCTCTTCGCC
AAGTGGAGAATCAGGGATGGCGAAGAGTATGCCGATGAGATGTCGGAGAT
TATGGTGGACGACAAAGAAGGGTACCTGGGCGACAAGAAGATCCTGGGTG
ACAACAGCAGCACCTCCGCAAGCTCGAGTGAGGATGACCGCTCAAGCATT
CACAGTGGCACGGTCCCTACTTCCACCCCGGCATGCCCCTTTGCAGACAT
GGCAAAGCCCGCGTCGGAAACCAAGATTTGGGCCGGCTCTAACTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4029896..4030841+

>ATCC64974_108540-T1 ID=ATCC64974_108540-T1|Name=ATCC64974_108540-T1|organism=Aspergillus niger N402|type=CDS|length=2475bp|location=Sequence derived from alignment at OGUI01000017.1:4029896..4030841+ (Aspergillus niger N402)
ATGGAATTCACTCTTGAGCCCAATCGACCAATGAAGCATGTCGACCGTAA
AGCCCTGTACACCCGTCTAGAGGCGCGCATCACTTACCTGCGAGACTTCC
TGGACTTCAATTCAAGTGACGTTGAGGCATTGGTGGCAGGCTCCAAGTAT
ATCAAGGCCCTGATCCCTGCCGTGGTCAACATCGTCTATAAGAAACTTCT
CGAGTCCGACATCACCGCTCGTGCCTTCCACACGAGAGATACCGCCGACG
ATACCCCCGTCGAGGAGTTCTTCACTGAAGAAAGCCCCCAGATCCAACGT
CGCAAGATGTTTTTGCGTTGGTACTTGATTAAGCTGTGTTCCGACCCTTC
TCAGATGGAATTCTGGCGGTACTTGAACAAAGTTGGAATGATGCACACTG
CCCAGGAACGTCTGTACTCGCTCAACATCGAATACATCCATATCGGCGCT
TGCCTCGGATTCATTCAAGATATCTTCACCGAAGCCCTCATGTCACATCC
TCACCTATCGCTCCCTCGCAAGACCGCCCTGGTTCGTGCCATCAGCAAGA
TCATCTGGATCCAGAACGACCTCTTCGCCAAGTGGAGAATCAGGGATGGC
GAAGAGTATGCCGATGAGATGTCGGAGATTATGGTGGACGACAAAGAAGG
GTACCTGGGCGACAAGAAGATCCTGGGTGACAACAGCAGCACCTCCGCAA
GCTCGAGTGAGGATGACCGCTCAAGCATTCACAGTGGCACGGTCCCTACT
TCCACCCCGGCATGCCCCTTTGCAGACATGGCAAAGCCCGCGTCGGAAAC
CAAGATTTGGGCCGGCTCTAACTGAATGGAATTCACTCTTGAGCCCAATC
GACCAATGAAGCATGTCGACCGTAAAGCCCTGTACACCCGTCTAGAGGCG
CGCATCACTTACCTGCGAGACTTCCTGGACTTCAATTCAAGTGACGTTGA
GGCATTGGTGGCAGGCTCCAAGTATATCAAGGCCCTGATCCCTGCCGTGG
TCAACATCGTCTATAAGAAACTTCTCGAGTCCGACATCACCGCTCGTGCC
TTCCACACGAGAGATACCGCCGACGATACCCCCGTCGAGGAGTTCTTCAC
TGAAGAAAGCCCCCAGATCCAACGTCGCAAGATGTTTTTGCGTTGGTACT
TGATTAAGCTGTGTTCCGACCCTTCTCAGATGGAATTCTGGCGGTACTTG
AACAAAGTTGGAATGATGCACACTGCCCAGGAACGTCTGTACTCGCTCAA
CATCGAATACATCCATATCGGCGCTTGCCTCGGATTCATTCAAGATATCT
TCACCGAAGCCCTCATGTCACATCCTCACCTATCGCTCCCTCGCAAGACC
GCCCTGGTTCGTGCCATCAGCAAGATCATCTGGATCCAGAACGACCTCTT
CGCCAAGTGGAGAATCAGGGATGGCGAAGAGTATGCCGATGAGATGTCGG
AGATTATGGTGGACGACAAAGAAGGGTACCTGGGCGACAAGAAGATCCTG
GGTGACAACAGCAGCACCTCCGCAAGCTCGAGTGAGGATGACCGCTCAAG
CATTCACAGTGGCACGGTCCCTACTTCCACCCCGGCATGCCCCTTTGCAG
ACATGGCAAAGCCCGCGTCGGAAACCAAGATTTGGGCCGGCTCTAACTGA
ATGGAATTCACTCTTGAGCCCAATCGACCAATGAAGCATGTCGACCGTAA
AGCCCTGTACACCCGTCTAGAGGCGCGCATCACTTACCTGCGAGACTTCC
TGGACTTCAATTCAAGTGACGTTGAGGCATTGGTGGCAGGCTCCAAGTAT
ATCAAGGCCCTGATCCCTGCCGTGGTCAACATCGTCTATAAGAAACTTCT
CGAGTCCGACATCACCGCTCGTGCCTTCCACACGAGAGATACCGCCGACG
ATACCCCCGTCGAGGAGTTCTTCACTGAAGAAAGCCCCCAGATCCAACGT
CGCAAGATGTTTTTGCGTTGGTACTTGATTAAGCTGTGTTCCGACCCTTC
TCAGATGGAATTCTGGCGGTACTTGAACAAAGTTGGAATGATGCACACTG
CCCAGGAACGTCTGTACTCGCTCAACATCGAATACATCCATATCGGCGCT
TGCCTCGGATTCATTCAAGATATCTTCACCGAAGCCCTCATGTCACATCC
TCACCTATCGCTCCCTCGCAAGACCGCCCTGGTTCGTGCCATCAGCAAGA
TCATCTGGATCCAGAACGACCTCTTCGCCAAGTGGAGAATCAGGGATGGC
GAAGAGTATGCCGATGAGATGTCGGAGATTATGGTGGACGACAAAGAAGG
GTACCTGGGCGACAAGAAGATCCTGGGTGACAACAGCAGCACCTCCGCAA
GCTCGAGTGAGGATGACCGCTCAAGCATTCACAGTGGCACGGTCCCTACT
TCCACCCCGGCATGCCCCTTTGCAGACATGGCAAAGCCCGCGTCGGAAAC
CAAGATTTGGGCCGGCTCTAACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0019825oxygen binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_108540ATCC64974_108540Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108540-T1.exon1ATCC64974_108540-T1.exon1Aspergillus niger N402exon
ATCC64974_108540-T1.exon2ATCC64974_108540-T1.exon2Aspergillus niger N402exon
ATCC64974_108540-T1.exon3ATCC64974_108540-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108540-T1.cdsATCC64974_108540-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108540-T1ATCC64974_108540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012292
DBxrefPFAM:PF11563
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4029896..4030841 +
Powered by Drupal