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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4057730..4059309- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108640-T1 ID=ATCC64974_108640-T1|Name=ATCC64974_108640-T1|organism=Aspergillus niger N402|type=mRNA|length=1580bp|location=Sequence derived from alignment at OGUI01000017.1:4057730..4059309- (Aspergillus niger N402)
ATGATCGACCACGTCGGCGTCCCCAAATCCGAAATCGCCAAATGGGTCGG
CATCACCACCGCCGTGACCTCTCTCTCGCAGGCCCTCATGGCCGTCACTT
GGGGCACTCTCTCCGACACTCTCGGCCGCAAACCCATCATCCTAGTCGGG
CTCACCTGCACCATGGTCTTCTCGCTTCTATTCGGCTTCTCCTCGTCCCT
CTCCATGCTAGTCATCTCCCGCGCCCTGCTCGGGCTCATGAACGGCAACG
TGGGCATCATCCGCACCATGGTTGCGGAAATGGTGCCCCAGAAGGAACTT
CAGCCCCGCGCGTTTAGTATCATGCCGCTGGTGTGGACGATCGGGAGTAT
TTTTGGTCCGGCGTTTGGGGGCGCGTTGGCGAGGCCCGCGGAGAAGCATC
CGGGGTTGTTTGGGGGGTCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTA
CCGAATATTGCTTCCGCGGTGTTTTTTGTTGTTGGGATTGCGACGGGGTG
GTTGTTTTTGCATGTATATCTATCCTCCCCTTTTATCTGGAAATGAGAGG
GATGTGCTAATGTGGGTATGGTATAGGAAACGCTCGCTGCGAAGAAACAT
CATCGCGACTATGGATTGGTTGTCGGCGAGGCATTGACTAGCTCGTGTAC
TTCTTCTCGGAAGAAGAAGTCAGAGTCTCACGCATCAGATGCAGAACGAC
AATCCCTTCTACCACCAAACACTACCCGTTCAGCGACAGCAACAGCAGCA
AAGAAATCCAAACCAACCTGGAGCGAGATCTTCACTCCCCAATCCCGACT
CGTTCTCCTCGCTTACGCCCTCATGTCCATGCACGCTATGGCCTTCGATT
CCGTCCTCCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAAC
CCGGATGTGAAACTCCCCTTCAAATTCACTGGTGGATTCGGCGTCGGTAT
GATCCCTTACTCCGTCCCATCCCCTTTCCCTTTCACCCTCCATACTAAAC
GCAAGAAATAGACTCCCAAACTATCGGCATCTACTACACCCTCGAAGGCA
TCCTCGGCATGTTCATCCAATTCCTCATCTTCCCCTGGGCGGCCCAAACC
TTCGGCGTACTCAACTGCCTAAAAGCCGTGGCCAGCGTGTTCCCGGTCAT
CTACCTGCTCACGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCA
CCGTGGCGATTTTCTGCCTCATGTTGGGGAAATTGTCCGCCTCGATCTTC
GGCTTTCCATGCACCACCATCCTGTTGACGAATTCAGCAAGTAGCTTGAG
CGTCTTGGGGACGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGA
GGGCAGTGGGACCGGCGATTATTGGGGGGGCGTACTCGTGGGGAGTGAAG
AGGGGGTGGGGGATTGTGCCGTGGTGGGTGCTGGGGGTGTTTGGGATGTT
GAGTGCGGTGCCGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATG
CACAGGAGGTGAATGATGAAGAGGGAGGAGAGGAAGAAGGGGAGGGGGAG
AGAGGGTATGGGAGTGTTGGGGGGAGGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4057730..4059309- >ATCC64974_108640-T1 ID=ATCC64974_108640-T1|Name=ATCC64974_108640-T1|organism=Aspergillus niger N402|type=CDS|length=4356bp|location=Sequence derived from alignment at OGUI01000017.1:4057730..4059309- (Aspergillus niger N402)
ACTCCCAAACTATCGGCATCTACTACACCCTCGAAGGCATCCTCGGCATG
TTCATCCAATTCCTCATCTTCCCCTGGGCGGCCCAAACCTTCGGCGTACT
CAACTGCCTAAAAGCCGTGGCCAGCGTGTTCCCGGTCATCTACCTGCTCA
CGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCACCGTGGCGATT
TTCTGCCTCATGTTGGGGAAATTGTCCGCCTCGATCTTCGGCTTTCCATG
CACCACCATCCTGTTGACGAATTCAGCAAGTAGCTTGAGCGTCTTGGGGA
CGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGAGGGCAGTGGGA
CCGGCGATTATTGGGGGGGCGTACTCGTGGGGAGTGAAGAGGGGGTGGGG
GATTGTGCCGTGGTGGGTGCTGGGGGTGTTTGGGATGTTGAGTGCGGTGC
CGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATGCACAGGAGGTG
AATGATGAAGAGGGAGGAGAGGAAGAAGGGGAGGGGGAGAGAGGGTATGG
GAGTGTTGGGGGGAGGTAAGAAACGCTCGCTGCGAAGAAACATCATCGCG
ACTATGGATTGGTTGTCGGCGAGGCATTGACTAGCTCGTGTACTTCTTCT
CGGAAGAAGAAGTCAGAGTCTCACGCATCAGATGCAGAACGACAATCCCT
TCTACCACCAAACACTACCCGTTCAGCGACAGCAACAGCAGCAAAGAAAT
CCAAACCAACCTGGAGCGAGATCTTCACTCCCCAATCCCGACTCGTTCTC
CTCGCTTACGCCCTCATGTCCATGCACGCTATGGCCTTCGATTCCGTCCT
CCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAACCCGGATG
TGAAACTCCCCTTCAAATTCACTGGTGGATTCGGCGTCGATGATCGACCA
CGTCGGCGTCCCCAAATCCGAAATCGCCAAATGGGTCGGCATCACCACCG
CCGTGACCTCTCTCTCGCAGGCCCTCATGGCCGTCACTTGGGGCACTCTC
TCCGACACTCTCGGCCGCAAACCCATCATCCTAGTCGGGCTCACCTGCAC
CATGGTCTTCTCGCTTCTATTCGGCTTCTCCTCGTCCCTCTCCATGCTAG
TCATCTCCCGCGCCCTGCTCGGGCTCATGAACGGCAACGTGGGCATCATC
CGCACCATGGTTGCGGAAATGGTGCCCCAGAAGGAACTTCAGCCCCGCGC
GTTTAGTATCATGCCGCTGGTGTGGACGATCGGGAGTATTTTTGGTCCGG
CGTTTGGGGGCGCGTTGGCGAGGCCCGCGGAGAAGCATCCGGGGTTGTTT
GGGGGGTCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTACCGAATATTGC
TTCCGCGGTGTTTTTTGTTGTTGGGATTGCGACGGGGTGGTTGTTTTTGC
ATACTCCCAAACTATCGGCATCTACTACACCCTCGAAGGCATCCTCGGCA
TGTTCATCCAATTCCTCATCTTCCCCTGGGCGGCCCAAACCTTCGGCGTA
CTCAACTGCCTAAAAGCCGTGGCCAGCGTGTTCCCGGTCATCTACCTGCT
CACGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCACCGTGGCGA
TTTTCTGCCTCATGTTGGGGAAATTGTCCGCCTCGATCTTCGGCTTTCCA
TGCACCACCATCCTGTTGACGAATTCAGCAAGTAGCTTGAGCGTCTTGGG
GACGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGAGGGCAGTGG
GACCGGCGATTATTGGGGGGGCGTACTCGTGGGGAGTGAAGAGGGGGTGG
GGGATTGTGCCGTGGTGGGTGCTGGGGGTGTTTGGGATGTTGAGTGCGGT
GCCGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATGCACAGGAGG
TGAATGATGAAGAGGGAGGAGAGGAAGAAGGGGAGGGGGAGAGAGGGTAT
GGGAGTGTTGGGGGGAGGTAAGAAACGCTCGCTGCGAAGAAACATCATCG
CGACTATGGATTGGTTGTCGGCGAGGCATTGACTAGCTCGTGTACTTCTT
CTCGGAAGAAGAAGTCAGAGTCTCACGCATCAGATGCAGAACGACAATCC
CTTCTACCACCAAACACTACCCGTTCAGCGACAGCAACAGCAGCAAAGAA
ATCCAAACCAACCTGGAGCGAGATCTTCACTCCCCAATCCCGACTCGTTC
TCCTCGCTTACGCCCTCATGTCCATGCACGCTATGGCCTTCGATTCCGTC
CTCCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAACCCGGA
TGTGAAACTCCCCTTCAAATTCACTGGTGGATTCGGCGTCGATGATCGAC
CACGTCGGCGTCCCCAAATCCGAAATCGCCAAATGGGTCGGCATCACCAC
CGCCGTGACCTCTCTCTCGCAGGCCCTCATGGCCGTCACTTGGGGCACTC
TCTCCGACACTCTCGGCCGCAAACCCATCATCCTAGTCGGGCTCACCTGC
ACCATGGTCTTCTCGCTTCTATTCGGCTTCTCCTCGTCCCTCTCCATGCT
AGTCATCTCCCGCGCCCTGCTCGGGCTCATGAACGGCAACGTGGGCATCA
TCCGCACCATGGTTGCGGAAATGGTGCCCCAGAAGGAACTTCAGCCCCGC
GCGTTTAGTATCATGCCGCTGGTGTGGACGATCGGGAGTATTTTTGGTCC
GGCGTTTGGGGGCGCGTTGGCGAGGCCCGCGGAGAAGCATCCGGGGTTGT
TTGGGGGGTCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTACCGAATATT
GCTTCCGCGGTGTTTTTTGTTGTTGGGATTGCGACGGGGTGGTTGTTTTT
GCATACTCCCAAACTATCGGCATCTACTACACCCTCGAAGGCATCCTCGG
CATGTTCATCCAATTCCTCATCTTCCCCTGGGCGGCCCAAACCTTCGGCG
TACTCAACTGCCTAAAAGCCGTGGCCAGCGTGTTCCCGGTCATCTACCTG
CTCACGCCATTCACAGTGCTTCTTCCCGTCCCGTGGCTGCGCACCGTGGC
GATTTTCTGCCTCATGTTGGGGAAATTGTCCGCCTCGATCTTCGGCTTTC
CATGCACCACCATCCTGTTGACGAATTCAGCAAGTAGCTTGAGCGTCTTG
GGGACGTTGAATGGGGTCGGCACGAGTGTGAGTGCCGTGGGGAGGGCAGT
GGGACCGGCGATTATTGGGGGGGCGTACTCGTGGGGAGTGAAGAGGGGGT
GGGGGATTGTGCCGTGGTGGGTGCTGGGGGTGTTTGGGATGTTGAGTGCG
GTGCCGGTGGGGTGGATGGGGGAAGAGAATCGGTTGCAGGATGCACAGGA
GGTGAATGATGAAGAGGGAGGAGAGGAAGAAGGGGAGGGGGAGAGAGGGT
ATGGGAGTGTTGGGGGGAGGTAAGAAACGCTCGCTGCGAAGAAACATCAT
CGCGACTATGGATTGGTTGTCGGCGAGGCATTGACTAGCTCGTGTACTTC
TTCTCGGAAGAAGAAGTCAGAGTCTCACGCATCAGATGCAGAACGACAAT
CCCTTCTACCACCAAACACTACCCGTTCAGCGACAGCAACAGCAGCAAAG
AAATCCAAACCAACCTGGAGCGAGATCTTCACTCCCCAATCCCGACTCGT
TCTCCTCGCTTACGCCCTCATGTCCATGCACGCTATGGCCTTCGATTCCG
TCCTCCCTGTCTTCCTGCATAGCCCGGAACAGCAATACGAGGGTAACCCG
GATGTGAAACTCCCCTTCAAATTCACTGGTGGATTCGGCGTCGATGATCG
ACCACGTCGGCGTCCCCAAATCCGAAATCGCCAAATGGGTCGGCATCACC
ACCGCCGTGACCTCTCTCTCGCAGGCCCTCATGGCCGTCACTTGGGGCAC
TCTCTCCGACACTCTCGGCCGCAAACCCATCATCCTAGTCGGGCTCACCT
GCACCATGGTCTTCTCGCTTCTATTCGGCTTCTCCTCGTCCCTCTCCATG
CTAGTCATCTCCCGCGCCCTGCTCGGGCTCATGAACGGCAACGTGGGCAT
CATCCGCACCATGGTTGCGGAAATGGTGCCCCAGAAGGAACTTCAGCCCC
GCGCGTTTAGTATCATGCCGCTGGTGTGGACGATCGGGAGTATTTTTGGT
CCGGCGTTTGGGGGCGCGTTGGCGAGGCCCGCGGAGAAGCATCCGGGGTT
GTTTGGGGGGTCAGAGTTCCTCAGGAAGTGGCCGTTTGCGTTACCGAATA
TTGCTTCCGCGGTGTTTTTTGTTGTTGGGATTGCGACGGGGTGGTTGTTT
TTGCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108640-T1 | ATCC64974_108640-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4057730..4059309 - |
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