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ATCC64974_108710-T1, ATCC64974_108710-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108710-T1
Unique NameATCC64974_108710-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4083122..4083831+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108710-T1 ID=ATCC64974_108710-T1|Name=ATCC64974_108710-T1|organism=Aspergillus niger N402|type=mRNA|length=710bp|location=Sequence derived from alignment at OGUI01000017.1:4083122..4083831+ (Aspergillus niger N402)
ATGGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACAGCAGGCCC
CGTCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTCCGCACCGG
CAGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAACTCCTCC
ATCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGACCACGCC
GCAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTGCTTGTCG
GTGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATGTGAGTATA
CTTTTCCCCATTGGATATGGATGAGTTCGGGTACAGAGAAATTGGAGTTT
CAGAGTTTGGCTAATATTGGAATCTTTGTGACAGCCGTTCAATGCCTTCC
TGAGTGGTTTCTGTGCTGCCGTTGGTCAGTTTGTTCTTACGGCTAGTTTG
AGGATGCAGACTAGTGGTGGTTCGACTTCGGCGACTGGGGGTGTGAGTGG
TGGGAAGGGGAAGGCGGGGAAGAAGGGTGCTGCGGCTGGTGCTGGGGAGG
AGGGGAGTGGTGTTTCGCCTGAGAGGTTAGTTTATTTACTTTACTTGGGT
GGTTTCTTTGGGGTGAGACTGGATTGCTAACTGTTTTGTGTAGGGCATTC
GCGGATTATGTCTTTGGGAGTCTGATTCTGCATTTCTTCTGTATTAACTT
CATTAACTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:4083122..4083831+

>ATCC64974_108710-T1 ID=ATCC64974_108710-T1|Name=ATCC64974_108710-T1|organism=Aspergillus niger N402|type=CDS|length=1647bp|location=Sequence derived from alignment at OGUI01000017.1:4083122..4083831+ (Aspergillus niger N402)
ATGGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACAGCAGGCCC
CGTCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTCCGCACCGG
CAGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAACTCCTCC
ATCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGACCACGCC
GCAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTGCTTGTCG
GTGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATCCGTTCAAT
GCCTTCCTGAGTGGTTTCTGTGCTGCCGTTGGTCAGTTTGTTCTTACGGC
TAGTTTGAGGATGCAGACTAGTGGTGGTTCGACTTCGGCGACTGGGGGTG
TGAGTGGTGGGAAGGGGAAGGCGGGGAAGAAGGGTGCTGCGGCTGGTGCT
GGGGAGGAGGGGAGTGGTGTTTCGCCTGAGAGGGCATTCGCGGATTATGT
CTTTGGGAGTCTGATTCTGCATTTCTTCTGTATTAACTTCATTAACTAGA
TGGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACAGCAGGCCCC
GTCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTCCGCACCGGC
AGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAACTCCTCCA
TCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGACCACGCCG
CAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTGCTTGTCGG
TGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATCCGTTCAATG
CCTTCCTGAGTGGTTTCTGTGCTGCCGTTGGTCAGTTTGTTCTTACGGCT
AGTTTGAGGATGCAGACTAGTGGTGGTTCGACTTCGGCGACTGGGGGTGT
GAGTGGTGGGAAGGGGAAGGCGGGGAAGAAGGGTGCTGCGGCTGGTGCTG
GGGAGGAGGGGAGTGGTGTTTCGCCTGAGAGGGCATTCGCGGATTATGTC
TTTGGGAGTCTGATTCTGCATTTCTTCTGTATTAACTTCATTAACTAGAT
GGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACAGCAGGCCCCG
TCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTCCGCACCGGCA
GCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAACTCCTCCAT
CTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGACCACGCCGC
AGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTGCTTGTCGGT
GGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATCCGTTCAATGC
CTTCCTGAGTGGTTTCTGTGCTGCCGTTGGTCAGTTTGTTCTTACGGCTA
GTTTGAGGATGCAGACTAGTGGTGGTTCGACTTCGGCGACTGGGGGTGTG
AGTGGTGGGAAGGGGAAGGCGGGGAAGAAGGGTGCTGCGGCTGGTGCTGG
GGAGGAGGGGAGTGGTGTTTCGCCTGAGAGGGCATTCGCGGATTATGTCT
TTGGGAGTCTGATTCTGCATTTCTTCTGTATTAACTTCATTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008250oligosaccharyltransferase complex
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_108710ATCC64974_108710Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108710-T1.exon1ATCC64974_108710-T1.exon1Aspergillus niger N402exon
ATCC64974_108710-T1.exon2ATCC64974_108710-T1.exon2Aspergillus niger N402exon
ATCC64974_108710-T1.exon3ATCC64974_108710-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108710-T1.cdsATCC64974_108710-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108710-T1ATCC64974_108710-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265JA7
DBxrefInterPro:IPR003038
DBxrefPFAM:PF02109
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4083122..4083831 +
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