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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4084163..4086962- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108720-T1 ID=ATCC64974_108720-T1|Name=ATCC64974_108720-T1|organism=Aspergillus niger N402|type=mRNA|length=2800bp|location=Sequence derived from alignment at OGUI01000017.1:4084163..4086962- (Aspergillus niger N402)
ATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAATCT
CCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGAAA
CGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATGGC
GACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTCCA
TGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCAGC
TCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTTTC
AGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAACG
CCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGGAA
ACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGCCC
GTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAAAA
GGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGAGC
AGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCGTC
ATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGAAA
AACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTTTG
GCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTGCC
AAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGCTA
TGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTACA
TGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTGAC
AAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAACAC
AGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGACT
TGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCAGA
TTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCTGT
CGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGCGG
TCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTCTT
GTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTTGA
TGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCCCA
TTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGGCT
GAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACCAG
TCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAAAC
TTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGCCA
ATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACGGG
ACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGAGC
TATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACACC
GTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGATTT
TATGGACCCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCTTT
GGTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAGGACGT
CGAATGACACCATTCCCAATGGACCCCCCGCTCGCGAAGCTCATCATCAC
GGCCGCAGAAACCTACGGCTGCAGCGAGGAAATGCTAACCATCGTATCTA
TGCTATCCGTCCCCAGCGTCTTCTACCGTCCCAGAGAGCGACAAGAAGAA
TCCGACGCCGCGCGCGAGAAATTCTTCGTCCCAGAATCCGACCACCTCAC
TTTACTCCACGTGTACACGCAATGGAAAGCAAACGGCTACTCCGACGGCT
GGTGCACACGCCACTTCCTCCACGCCAAGGCACTGCGGCGGGCGCGCGAA
GTCCGCGACCAGCTGCACGACATCATGACGGTGCAGAAGATGCCCTTGGT
CAGTTGCGGCACTGACTGGGACGAGATCCGCAAATGCATCTGCTCGGGTT
TCTACCACCAAGCCGCGCGCGTCAAGGGTATCGGCGAGTTCCTCAACCTC
CGAACCAGCGTCAGCATGCAACTCCACCCGACCAGTGCTCTCTACGGTCT
GGGATATGTCCCGGAGTACGTGGTCTACCACGAATTGATCCTCACCAGCA
AGGAGTACATGTCTACCGTGACTGCTGTAGATCCACATGTAAGGTCCCCA
CCCTATCCCATATACAATAAATACTAACGACATCCGGTAATAGTGGCTCG
CCGAACTCGGAGGTGTCTTCTACTCCGTCAAAGAAAAGGGATATTCTCAG
CGCGAGCGCCGCATCACCGAACAAGAGTTCAACCGGCGCGTGGAGATCGA
GACTCAGATGGCGGCGGACCGCGAACGCGCCGCAGCCGAGAAGCAGCGCG
AGGCGGAGAGGAACGATCCATCCAGACGCAGAAAGGAGATTGAAGTGGGG
TCTGTTGTGCGGAGGCCTGTCGCGACAGCAAGACGTGTAGGGGGTGTGAC
GGCCTCGAGTAGTGGTGGTGGTGCGCGCAACGGTGGAAGTGGAGGCGGAA
GCGTGGTTAAGAAGCCGCAGATTAAGCGGAAACCAGGACGGGCCTTTTGA
back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4084163..4086962- >ATCC64974_108720-T1 ID=ATCC64974_108720-T1|Name=ATCC64974_108720-T1|organism=Aspergillus niger N402|type=CDS|length=5490bp|location=Sequence derived from alignment at OGUI01000017.1:4084163..4086962- (Aspergillus niger N402)
TGGCTCGCCGAACTCGGAGGTGTCTTCTACTCCGTCAAAGAAAAGGGATA
TTCTCAGCGCGAGCGCCGCATCACCGAACAAGAGTTCAACCGGCGCGTGG
AGATCGAGACTCAGATGGCGGCGGACCGCGAACGCGCCGCAGCCGAGAAG
CAGCGCGAGGCGGAGAGGAACGATCCATCCAGACGCAGAAAGGAGATTGA
AGTGGGGTCTGTTGTGCGGAGGCCTGTCGCGACAGCAAGACGTGTAGGGG
GTGTGACGGCCTCGAGTAGTGGTGGTGGTGCGCGCAACGGTGGAAGTGGA
GGCGGAAGCGTGGTTAAGAAGCCGCAGATTAAGCGGAAACCAGGACGGGC
CTTTTGAATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCT
CCAATCTCCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAAC
TGGGAAACGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTT
CGATGGCGACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGC
TGGTCCATGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACC
AAGCAGCTCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGC
AGTTTTCAGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGC
GGGAACGCCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCG
CTGGGAAACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGC
TATGCCCGTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATC
TGAAAAAGGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTC
CGGGAGCAGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTT
GCGCGTCATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGT
CTGGAAAAACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCG
AAGTTTGGCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAG
TGTTGCCAAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAG
TTGGCTATGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATC
AAGTACATGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGA
CCTTGACAAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGC
TGAACACAGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGC
AGGGACTTGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTT
CTCCAGATTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGT
TTCCTGTCGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGAC
AGCGCGGTCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGA
TATTCTTGTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGC
TGGTTGATGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATT
CTTCCCATTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGA
ACGGGCTGAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTG
AAACCAGTCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTAC
TCCAAACTTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGAT
CACGCCAATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGAC
GTACGGGACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAG
AACGAGCTATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTC
CAACACCGTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACT
TTGATTTTATGGACCCCCCACCCCAGGAGACAATCACCACATCCCTCTTC
GAGCTTTGGTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACT
AGGACGTCGAATGACACCATTCCCAATGGACCCCCCGCTCGCGAAGCTCA
TCATCACGGCCGCAGAAACCTACGGCTGCAGCGAGGAAATGCTAACCATC
GTATCTATGCTATCCGTCCCCAGCGTCTTCTACCGTCCCAGAGAGCGACA
AGAAGAATCCGACGCCGCGCGCGAGAAATTCTTCGTCCCAGAATCCGACC
ACCTCACTTTACTCCACGTGTACACGCAATGGAAAGCAAACGGCTACTCC
GACGGCTGGTGCACACGCCACTTCCTCCACGCCAAGGCACTGCGGCGGGC
GCGCGAAGTCCGCGACCAGCTGCACGACATCATGACGGTGCAGAAGATGC
CCTTGGTCAGTTGCGGCACTGACTGGGACGAGATCCGCAAATGCATCTGC
TCGGGTTTCTACCACCAAGCCGCGCGCGTCAAGGGTATCGGCGAGTTCCT
CAACCTCCGAACCAGCGTCAGCATGCAACTCCACCCGACCAGTGCTCTCT
ACGGTCTGGGATATGTCCCGGAGTACGTGGTCTACCACGAATTGATCCTC
ACCAGCAAGGAGTACATGTCTACCGTGACTGCTGTAGATCCACATTGGCT
CGCCGAACTCGGAGGTGTCTTCTACTCCGTCAAAGAAAAGGGATATTCTC
AGCGCGAGCGCCGCATCACCGAACAAGAGTTCAACCGGCGCGTGGAGATC
GAGACTCAGATGGCGGCGGACCGCGAACGCGCCGCAGCCGAGAAGCAGCG
CGAGGCGGAGAGGAACGATCCATCCAGACGCAGAAAGGAGATTGAAGTGG
GGTCTGTTGTGCGGAGGCCTGTCGCGACAGCAAGACGTGTAGGGGGTGTG
ACGGCCTCGAGTAGTGGTGGTGGTGCGCGCAACGGTGGAAGTGGAGGCGG
AAGCGTGGTTAAGAAGCCGCAGATTAAGCGGAAACCAGGACGGGCCTTTT
GAATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAAT
CTCCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGA
AACGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATG
GCGACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTC
CATGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCA
GCTCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTT
TCAGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAA
CGCCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGG
AAACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGC
CCGTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAA
AAGGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGA
GCAGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCG
TCATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGA
AAAACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTT
TGGCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTG
CCAAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGC
TATGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTA
CATGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTG
ACAAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAAC
ACAGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGA
CTTGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCA
GATTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCT
GTCGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGC
GGTCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTC
TTGTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTT
GATGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCC
CATTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGG
CTGAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACC
AGTCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAA
ACTTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGC
CAATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACG
GGACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGA
GCTATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACA
CCGTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGAT
TTTATGGACCCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCT
TTGGTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAGGAC
GTCGAATGACACCATTCCCAATGGACCCCCCGCTCGCGAAGCTCATCATC
ACGGCCGCAGAAACCTACGGCTGCAGCGAGGAAATGCTAACCATCGTATC
TATGCTATCCGTCCCCAGCGTCTTCTACCGTCCCAGAGAGCGACAAGAAG
AATCCGACGCCGCGCGCGAGAAATTCTTCGTCCCAGAATCCGACCACCTC
ACTTTACTCCACGTGTACACGCAATGGAAAGCAAACGGCTACTCCGACGG
CTGGTGCACACGCCACTTCCTCCACGCCAAGGCACTGCGGCGGGCGCGCG
AAGTCCGCGACCAGCTGCACGACATCATGACGGTGCAGAAGATGCCCTTG
GTCAGTTGCGGCACTGACTGGGACGAGATCCGCAAATGCATCTGCTCGGG
TTTCTACCACCAAGCCGCGCGCGTCAAGGGTATCGGCGAGTTCCTCAACC
TCCGAACCAGCGTCAGCATGCAACTCCACCCGACCAGTGCTCTCTACGGT
CTGGGATATGTCCCGGAGTACGTGGTCTACCACGAATTGATCCTCACCAG
CAAGGAGTACATGTCTACCGTGACTGCTGTAGATCCACAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
| GO:0004386 | helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
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| ATCC64974_108720-T1 | ATCC64974_108720-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR002464 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR011709 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR007502 |
| DBxref | PFAM:PF07717 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF04408 |
| DBxref | PFAM:PF00270 |
| Product | DEAH-box RNA helicase prp16 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4084163..4086962 - |
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